Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:01:34 (1116070): wrapper (7.7.26015): starting
04:01:34 (1116070): wrapper: running run_atlas (--nthreads 2)
[2025-05-09 04:01:34] Arguments: --nthreads 2
[2025-05-09 04:01:34] Threads: 2
[2025-05-09 04:01:34] Checking for CVMFS
[2025-05-09 04:01:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 04:01:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 04:01:34] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 04:01:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 04:01:34] 2.9.2.0 16062 5503 69668 145776 3 56 20140030 36864000 0 130560 0 2764411 99.986 1454103 4405 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-09 04:01:34] CVMFS is ok
[2025-05-09 04:01:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-09 04:01:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-09 04:01:34] Further information can be found at the LHC@home message board.
[2025-05-09 04:01:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 04:01:34] Checking for apptainer binary...
[2025-05-09 04:01:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 04:01:34] Running /usr/bin/apptainer --version
[2025-05-09 04:01:34] apptainer version 1.3.6-6.1
[2025-05-09 04:01:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 04:01:34] magicA250a
[2025-05-09 04:01:34] apptainer works
[2025-05-09 04:01:34] Set ATHENA_PROC_NUMBER=2
[2025-05-09 04:01:34] Set ATHENA_CORE_NUMBER=2
[2025-05-09 04:01:34] Starting ATLAS job with PandaID=6638317139
[2025-05-09 04:01:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 06:53:16]  *** The last 200 lines of the pilot log: ***
[2025-05-09 06:53:16] 2025-05-09 04:52:58,011 | INFO     | mean x: 1746761214.5
[2025-05-09 06:53:16] 2025-05-09 04:52:58,011 | INFO     | mean y: 2243319.0535714286
[2025-05-09 06:53:16] 2025-05-09 04:52:58,011 | INFO     | -- intersect: -60202549282.2758
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | intersect: -60202549282.2758
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | chi2: 2.8674649543059147
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | sum of square deviations: 1342841922.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | sum of deviations: 48817565194.00001
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | mean x: 1746761062.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | mean y: 2241095.791411043
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | -- intersect: -63499367414.853294
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | intersect: -63499367414.853294
[2025-05-09 06:53:16] 2025-05-09 04:52:58,012 | INFO     | chi2: 2.868600152761018
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | current chi2=2.868600152761018 (change=-0.039588921684935004 %)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | right removable region: 162
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | sum of square deviations: 1342841922.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | sum of deviations: 20106216893.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | mean x: 1746761367.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | mean y: 2279695.7423312883
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | -- intersect: -26151776362.402664
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | intersect: -26151776362.402664
[2025-05-09 06:53:16] 2025-05-09 04:52:58,013 | INFO     | chi2: 1.0826220145724668
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | current chi2=1.0826220145724668 (change=62.24462960055527 %)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | sum of square deviations: 1223016419.5
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | sum of deviations: -4690061097.5
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | mean x: 1746761519.5
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | mean y: 2311354.14556962
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | -- intersect: 6700846319.494772
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | intersect: 6700846319.494772
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | chi2: 0.03958074971048131
[2025-05-09 06:53:16] 2025-05-09 04:52:58,014 | INFO     | current chi2=0.03958074971048131 (change=96.34399179236051 %)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | sum of square deviations: 1110539892.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | sum of deviations: -4358934157.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | mean x: 1746761672.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | mean y: 2310849.0392156863
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | -- intersect: 6858452777.004493
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | intersect: 6858452777.004493
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | chi2: 0.022549041323592423
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | current chi2=0.022549041323592423 (change=43.030282426355235 %)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,015 | INFO     | sum of square deviations: 1005179777.0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | sum of deviations: -2330892502.499999
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | mean x: 1746761824.5
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | mean y: 2307908.4527027025
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | -- intersect: 4052841090.2203155
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | intersect: 4052841090.2203155
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | chi2: 0.017534127019182524
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | current chi2=0.017534127019182524 (change=22.240033323114876 %)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | left removable region: 40
[2025-05-09 06:53:16] 2025-05-09 04:52:58,016 | INFO     | sum of square deviations: 563026370.5
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | sum of deviations: -164458439.99999964
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | mean x: 1746762251.5
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | mean y: 2303681.9836065574
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | -- intersect: 512528087.063363
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | intersect: 512528087.063363
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | chi2: 0.0018312040244101906
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | -- intersect: 512528087.063363
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | current memory leak: -0.29 B/s (using 122 data points, chi2=0.00)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | ..............................
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | . Timing measurements:
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | . get job = 0 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | . initial setup = 1 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | . payload setup = 3 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,017 | INFO     | . stage-in = 0 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,018 | INFO     | . payload execution = 10246 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,018 | INFO     | . stage-out = 0 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,018 | INFO     | . log creation = 0 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,018 | INFO     | ..............................
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | 
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | job summary report
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | --------------------------------------------------
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | PanDA job id: 6638317139
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | task id: 44506063
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | errors: (none)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | pilot state: finished 
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | transexitcode: 0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | exeerrorcode: 0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | exeerrordiag: 
[2025-05-09 06:53:16] 2025-05-09 04:52:58,059 | INFO     | exitcode: 0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | exitmsg: OK
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | cpuconsumptiontime: 19284 s
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | nevents: 400
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | neventsw: 0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | pid: 1126108
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | pgrp: 1126108
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | corecount: 2
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | event service: False
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | sizes: {0: 2393691, 3: 2393897, 11: 2393925, 10252: 2422735, 10253: 2431682, 10255: 2431738, 10263: 2432036}
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | --------------------------------------------------
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | 
[2025-05-09 06:53:16] 2025-05-09 04:52:58,060 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-09 06:53:16] 2025-05-09 04:52:58,068 | INFO     | PID=1119699 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | job 6638317139 has completed (purged errors)
[2025-05-09 06:53:16] 2025-05-09 04:52:58,073 | INFO     | overall cleanup function is called
[2025-05-09 06:53:16] 2025-05-09 04:52:59,079 | INFO     | --- collectZombieJob: --- 10, [1126108]
[2025-05-09 06:53:16] 2025-05-09 04:52:59,080 | INFO     | zombie collector waiting for pid 1126108
[2025-05-09 06:53:16] 2025-05-09 04:52:59,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 06:53:16] 2025-05-09 04:52:59,080 | INFO     | collected zombie processes
[2025-05-09 06:53:16] 2025-05-09 04:52:59,080 | INFO     | will attempt to kill all subprocesses of pid=1126108
[2025-05-09 06:53:16] 2025-05-09 04:52:59,119 | INFO     | process IDs to be killed: [1126108] (in reverse order)
[2025-05-09 06:53:16] 2025-05-09 04:52:59,142 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 06:53:16] 2025-05-09 04:52:59,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 06:53:16] 2025-05-09 04:52:59,143 | INFO     | did not find any defunct processes belonging to 1126108
[2025-05-09 06:53:16] 2025-05-09 04:52:59,144 | INFO     | did not find any defunct processes belonging to 1126108
[2025-05-09 06:53:16] 2025-05-09 04:52:59,144 | INFO     | ready for new job
[2025-05-09 06:53:16] 2025-05-09 04:52:59,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 06:53:16] 2025-05-09 04:52:59,144 | INFO     | **************************************
[2025-05-09 06:53:16] 2025-05-09 04:52:59,145 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 06:53:16] 2025-05-09 04:52:59,145 | INFO     | **************************************
[2025-05-09 06:53:16] 2025-05-09 04:52:59,145 | INFO     | 
[2025-05-09 06:53:16] 2025-05-09 04:52:59,145 | INFO     | architecture information:
[2025-05-09 06:53:16] 2025-05-09 04:52:59,145 | INFO     | executing command: cat /etc/os-release
[2025-05-09 06:53:16] 2025-05-09 04:52:59,154 | INFO     | cat /etc/os-release:
[2025-05-09 06:53:16] NAME="CentOS Linux"
[2025-05-09 06:53:16] VERSION="7 (Core)"
[2025-05-09 06:53:16] ID="centos"
[2025-05-09 06:53:16] ID_LIKE="rhel fedora"
[2025-05-09 06:53:16] VERSION_ID="7"
[2025-05-09 06:53:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 06:53:16] ANSI_COLOR="0;31"
[2025-05-09 06:53:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 06:53:16] HOME_URL="https://www.centos.org/"
[2025-05-09 06:53:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 06:53:16] 
[2025-05-09 06:53:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 06:53:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 06:53:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 06:53:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 06:53:16] 
[2025-05-09 06:53:16] 2025-05-09 04:52:59,154 | INFO     | **************************************
[2025-05-09 06:53:16] 2025-05-09 04:52:59,658 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-09 06:53:16] 2025-05-09 04:52:59,671 | INFO     | sufficient remaining disk space (336860282880 B)
[2025-05-09 06:53:16] 2025-05-09 04:52:59,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 06:53:16] 2025-05-09 04:52:59,671 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 06:53:16] 2025-05-09 04:52:59,671 | INFO     | update_server=False
[2025-05-09 06:53:16] 2025-05-09 04:52:59,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 06:53:16] 2025-05-09 04:52:59,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 06:53:16] 2025-05-09 04:52:59,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 06:53:16] 2025-05-09 04:52:59,672 | INFO     | aborting loop
[2025-05-09 06:53:16] 2025-05-09 04:52:59,814 | INFO     | all payload control threads have been joined
[2025-05-09 06:53:16] 2025-05-09 04:52:59,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 06:53:16] 2025-05-09 04:53:00,062 | INFO     | all data control threads have been joined
[2025-05-09 06:53:16] 2025-05-09 04:53:00,075 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 06:53:16] 2025-05-09 04:53:00,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 06:53:16] 2025-05-09 04:53:00,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 06:53:16] 2025-05-09 04:53:00,227 | INFO     | all job control threads have been joined
[2025-05-09 06:53:16] 2025-05-09 04:53:00,676 | INFO     | [job] retrieve thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:00,677 | INFO     | [job] job monitor thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:00,677 | INFO     | [job] queue monitor thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:00,782 | INFO     | [data] copytool_in thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:00,820 | INFO     | [payload] control thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:00,879 | INFO     | [payload] validate_post thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:00,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 06:53:16] 2025-05-09 04:53:01,068 | INFO     | [data] control thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:01,233 | INFO     | [job] control thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:01,537 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:01,994 | INFO     | [payload] failed_post thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:01,996 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:02,012 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:02,103 | INFO     | [job] validate thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:02,922 | INFO     | [data] copytool_out thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:03,883 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:09,916 | INFO     | job.realtimelogging is not enabled
[2025-05-09 06:53:16] 2025-05-09 04:53:10,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 06:53:16] 2025-05-09 04:53:11,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421771806528)>', '<ExcThread(monitor, started 140421070059264)>']
[2025-05-09 06:53:16] 2025-05-09 04:53:12,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 06:53:16] 2025-05-09 04:53:12,134 | INFO     | [monitor] control thread has ended
[2025-05-09 06:53:16] 2025-05-09 04:53:16,390 | INFO     | all workflow threads have been joined
[2025-05-09 06:53:16] 2025-05-09 04:53:16,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 06:53:16] 2025-05-09 04:53:16,391 | INFO     | traces error code: 0
[2025-05-09 06:53:16] 2025-05-09 04:53:16,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 06:53:16] 2025-05-09 04:53:16,443 [wrapper] ==== pilot stdout END ====
[2025-05-09 06:53:16] 2025-05-09 04:53:16,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 06:53:16] 2025-05-09 04:53:16,449 [wrapper] pilotpid: 1119699
[2025-05-09 06:53:16] 2025-05-09 04:53:16,451 [wrapper] Pilot exit status: 0
[2025-05-09 06:53:16] 2025-05-09 04:53:16,459 [wrapper] pandaids: 6638317139
[2025-05-09 06:53:16] 2025-05-09 04:53:16,474 [wrapper] cleanup supervisor_pilot 1145877 1119700
[2025-05-09 06:53:16] 2025-05-09 04:53:16,477 [wrapper] Test setup, not cleaning
[2025-05-09 06:53:16] 2025-05-09 04:53:16,480 [wrapper] apfmon messages muted
[2025-05-09 06:53:16] 2025-05-09 04:53:16,483 [wrapper] ==== wrapper stdout END ====
[2025-05-09 06:53:16] 2025-05-09 04:53:16,485 [wrapper] ==== wrapper stderr END ====
[2025-05-09 06:53:16]  *** Error codes and diagnostics ***
[2025-05-09 06:53:16]     "exeErrorCode": 0,
[2025-05-09 06:53:16]     "exeErrorDiag": "",
[2025-05-09 06:53:16]     "pilotErrorCode": 0,
[2025-05-09 06:53:16]     "pilotErrorDiag": "",
[2025-05-09 06:53:16]  *** Listing of results directory ***
[2025-05-09 06:53:16] total 427080
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc    495897 May  8 15:05 pilot3.tar.gz
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc      5111 May  8 15:21 queuedata.json
[2025-05-09 06:53:16] -rwx------ 1 boinc boinc     37140 May  8 15:22 runpilot2-wrapper.sh
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc       100 May  9 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 06:53:16] -rwxr-xr-x 1 boinc boinc      7986 May  9 04:01 run_atlas
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc       105 May  9 04:01 job.xml
[2025-05-09 06:53:16] -rw-r--r-- 2 boinc boinc 223754100 May  9 04:01 EVNT.44506061._002022.pool.root.1
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc      6679 May  9 04:01 init_data.xml
[2025-05-09 06:53:16] drwxrwx--x 2 boinc boinc      4096 May  9 04:01 shared
[2025-05-09 06:53:16] -rw-r--r-- 2 boinc boinc    508880 May  9 04:01 input.tar.gz
[2025-05-09 06:53:16] -rw-r--r-- 2 boinc boinc     17569 May  9 04:01 start_atlas.sh
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc         0 May  9 04:01 boinc_lockfile
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc      2557 May  9 04:01 pandaJob.out
[2025-05-09 06:53:16] -rw------- 1 boinc boinc       424 May  9 04:01 setup.sh.local
[2025-05-09 06:53:16] -rw------- 1 boinc boinc    997945 May  9 04:01 agis_schedconf.cvmfs.json
[2025-05-09 06:53:16] -rw------- 1 boinc boinc   1596741 May  9 04:01 agis_ddmendpoints.agis.ALL.json
[2025-05-09 06:53:16] drwx------ 4 boinc boinc      4096 May  9 04:01 pilot3
[2025-05-09 06:53:16] -rw------- 1 boinc boinc 207269203 May  9 06:52 HITS.44506063._054615.pool.root.1
[2025-05-09 06:53:16] -rw------- 1 boinc boinc        95 May  9 06:52 pilot_heartbeat.json
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc       530 May  9 06:52 boinc_task_state.xml
[2025-05-09 06:53:16] -rw------- 1 boinc boinc      1020 May  9 06:52 memory_monitor_summary.json
[2025-05-09 06:53:16] -rw------- 1 boinc boinc    274543 May  9 06:52 log.44506063._054615.job.log.tgz.1
[2025-05-09 06:53:16] -rw------- 1 boinc boinc      7664 May  9 06:52 heartbeat.json
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc        28 May  9 06:53 wrapper_checkpoint.txt
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc      8192 May  9 06:53 boinc_mmap_file
[2025-05-09 06:53:16] -rw------- 1 boinc boinc      4429 May  9 06:53 pilotlog.txt
[2025-05-09 06:53:16] -rw------- 1 boinc boinc    954884 May  9 06:53 log.44506063._054615.job.log.1
[2025-05-09 06:53:16] -rw------- 1 boinc boinc       357 May  9 06:53 output.list
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc       620 May  9 06:53 runtime_log
[2025-05-09 06:53:16] -rw------- 1 boinc boinc   1249280 May  9 06:53 result.tar.gz
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc     11120 May  9 06:53 runtime_log.err
[2025-05-09 06:53:16] -rw------- 1 boinc boinc       665 May  9 06:53 hrdMDmgNGX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCP9LDm1zme2n.diag
[2025-05-09 06:53:16] -rw-r--r-- 1 boinc boinc     20813 May  9 06:53 stderr.txt
[2025-05-09 06:53:16] HITS file was successfully produced:
[2025-05-09 06:53:16] -rw------- 1 boinc boinc 207269203 May  9 06:52 shared/HITS.pool.root.1
[2025-05-09 06:53:16]  *** Contents of shared directory: ***
[2025-05-09 06:53:16] total 422668
[2025-05-09 06:53:16] -rw-r--r-- 2 boinc boinc 223754100 May  9 04:01 ATLAS.root_0
[2025-05-09 06:53:16] -rw-r--r-- 2 boinc boinc    508880 May  9 04:01 input.tar.gz
[2025-05-09 06:53:16] -rw-r--r-- 2 boinc boinc     17569 May  9 04:01 start_atlas.sh
[2025-05-09 06:53:16] -rw------- 1 boinc boinc 207269203 May  9 06:52 HITS.pool.root.1
[2025-05-09 06:53:16] -rw------- 1 boinc boinc   1249280 May  9 06:53 result.tar.gz
06:53:18 (1116070): run_atlas exited; CPU time 19332.008723
06:53:18 (1116070): called boinc_finish(0)

</stderr_txt>
]]>

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