Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:54:47 (1501862): wrapper (7.7.26015): starting
03:54:47 (1501862): wrapper: running run_atlas (--nthreads 3)
[2025-05-09 03:54:47] Arguments: --nthreads 3
[2025-05-09 03:54:47] Threads: 3
[2025-05-09 03:54:47] Checking for CVMFS
[2025-05-09 03:54:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 03:54:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 03:54:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 03:54:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 03:54:47] 2.9.2.0 14735 5421 83028 145776 2 56 31902272 36864000 0 130560 0 3851897 99.990 1453737 4821 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-09 03:54:47] CVMFS is ok
[2025-05-09 03:54:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-09 03:54:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-09 03:54:47] Further information can be found at the LHC@home message board.
[2025-05-09 03:54:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 03:54:47] Checking for apptainer binary...
[2025-05-09 03:54:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 03:54:47] Running /usr/bin/apptainer --version
[2025-05-09 03:54:47] apptainer version 1.3.6-6.1
[2025-05-09 03:54:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 03:54:47] magicA232
[2025-05-09 03:54:47] apptainer works
[2025-05-09 03:54:47] Set ATHENA_PROC_NUMBER=3
[2025-05-09 03:54:47] Set ATHENA_CORE_NUMBER=3
[2025-05-09 03:54:47] Starting ATLAS job with PandaID=6638231787
[2025-05-09 03:54:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 05:34:29]  *** The last 200 lines of the pilot log: ***
[2025-05-09 05:34:29]  direct_access_lan=False
[2025-05-09 05:34:29]  direct_access_wan=False
[2025-05-09 05:34:29]  domain=
[2025-05-09 05:34:29]  filesize=246366
[2025-05-09 05:34:29]  filetype=log
[2025-05-09 05:34:29]  guid=0aa1685c-2dc2-44fa-a59f-89460474cec7
[2025-05-09 05:34:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-09 05:34:29]  is_altstaged=None
[2025-05-09 05:34:29]  is_tar=False
[2025-05-09 05:34:29]  lfn=log.44506063._053166.job.log.tgz.1
[2025-05-09 05:34:29]  mtime=0
[2025-05-09 05:34:29]  protocol_id=None
[2025-05-09 05:34:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-09 05:34:29]  replicas=None
[2025-05-09 05:34:29]  scope=mc23_13p6TeV
[2025-05-09 05:34:29]  status=None
[2025-05-09 05:34:29]  status_code=0
[2025-05-09 05:34:29]  storage_token=
[2025-05-09 05:34:29]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6638231787/log.44506063._053166.job.log.tgz.1
[2025-05-09 05:34:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/0b/log.44506063._053166.job.log.tgz.1
[2025-05-09 05:34:29]  workdir=None
[2025-05-09 05:34:29] ]
[2025-05-09 05:34:29] 2025-05-09 03:34:13,679 | INFO     | transferring file log.44506063._053166.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6638231787/log.44506063._053166.job.log.tgz.1 to /local/data/boinc/
[2025-05-09 05:34:29] 2025-05-09 03:34:13,679 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6638231787/log.44506063._053166.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0531
[2025-05-09 05:34:29] 2025-05-09 03:34:13,694 | INFO     | adding to output.list: log.44506063._053166.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/0b/log.44506063._053166.job.log.tg
[2025-05-09 05:34:29] 2025-05-09 03:34:13,694 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-09 05:34:29] 2025-05-09 03:34:13,694 | INFO     | summary of transferred files:
[2025-05-09 05:34:29] 2025-05-09 03:34:13,695 | INFO     |  -- lfn=log.44506063._053166.job.log.tgz.1, status_code=0, status=transferred
[2025-05-09 05:34:29] 2025-05-09 03:34:13,695 | INFO     | stage-out finished correctly
[2025-05-09 05:34:29] 2025-05-09 03:34:13,725 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-09 05:34:29] 2025-05-09 03:34:15,412 | INFO     | job 6638231787 has state=finished
[2025-05-09 05:34:29] 2025-05-09 03:34:15,412 | INFO     | preparing for final server update for job 6638231787 in state='finished'
[2025-05-09 05:34:29] 2025-05-09 03:34:15,413 | INFO     | this job has now completed (state=finished)
[2025-05-09 05:34:29] 2025-05-09 03:34:15,413 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-09 05:34:29] 2025-05-09 03:34:15,413 | INFO     | log transfer has been attempted: DONE
[2025-05-09 05:34:29] 2025-05-09 03:34:15,413 | INFO     | job 6638231787 has finished - writing final server update
[2025-05-09 05:34:29] 2025-05-09 03:34:15,413 | INFO     | total number of processed events: 400 (read)
[2025-05-09 05:34:29] 2025-05-09 03:34:15,414 | INFO     | executing command: lscpu
[2025-05-09 05:34:29] 2025-05-09 03:34:15,431 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-09 05:34:29] 2025-05-09 03:34:15,894 | INFO     | monitor loop #459: job 0:6638231787 is in state 'finished'
[2025-05-09 05:34:29] 2025-05-09 03:34:15,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 05:34:29] 2025-05-09 03:34:17,850 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-09 05:34:29] 2025-05-09 03:34:17,850 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6638231787/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 05:34:29] 2025-05-09 03:34:17,851 | INFO     | extracted standard info from prmon json
[2025-05-09 05:34:29] 2025-05-09 03:34:17,851 | INFO     | extracted standard memory fields from prmon json
[2025-05-09 05:34:29] 2025-05-09 03:34:17,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-09 05:34:29] 2025-05-09 03:34:17,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 05:34:29] 2025-05-09 03:34:17,851 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | fitting pss+swap vs Time
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | sum of square deviations: 233641590.0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | sum of deviations: 11813236515.0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | mean x: 1746758763.0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | mean y: 2306783.5934065934
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | -- intersect: -88316191656.55089
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | intersect: -88316191656.55089
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | chi2: 1.1528763120635568
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | -- intersect: -88316191656.55089
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | current memory leak: 50.56 B/s (using 91 data points, chi2=1.15)
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | ..............................
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | . Timing measurements:
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | . get job = 0 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | . initial setup = 1 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,852 | INFO     | . payload setup = 3 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,853 | INFO     | . stage-in = 0 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,853 | INFO     | . payload execution = 5939 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,853 | INFO     | . stage-out = 0 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,853 | INFO     | . log creation = 0 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,853 | INFO     | ..............................
[2025-05-09 05:34:29] 2025-05-09 03:34:17,884 | INFO     | 
[2025-05-09 05:34:29] 2025-05-09 03:34:17,884 | INFO     | job summary report
[2025-05-09 05:34:29] 2025-05-09 03:34:17,884 | INFO     | --------------------------------------------------
[2025-05-09 05:34:29] 2025-05-09 03:34:17,884 | INFO     | PanDA job id: 6638231787
[2025-05-09 05:34:29] 2025-05-09 03:34:17,884 | INFO     | task id: 44506063
[2025-05-09 05:34:29] 2025-05-09 03:34:17,884 | INFO     | errors: (none)
[2025-05-09 05:34:29] 2025-05-09 03:34:17,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | pilot state: finished 
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | transexitcode: 0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | exeerrorcode: 0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | exeerrordiag: 
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | exitcode: 0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | exitmsg: OK
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | cpuconsumptiontime: 15949 s
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | nevents: 400
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | neventsw: 0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | pid: 1511949
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | pgrp: 1511949
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | corecount: 3
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | event service: False
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | sizes: {0: 2393741, 3: 2393947, 11: 2393975, 5946: 2420716, 5948: 2429719, 5952: 2429833}
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | --------------------------------------------------
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | 
[2025-05-09 05:34:29] 2025-05-09 03:34:17,885 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,900 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 05:34:29] 2025-05-09 03:34:17,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,900 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 05:34:29] 2025-05-09 03:34:17,900 | INFO     | job 6638231787 has completed (purged errors)
[2025-05-09 05:34:29] 2025-05-09 03:34:17,900 | INFO     | overall cleanup function is called
[2025-05-09 05:34:29] 2025-05-09 03:34:18,906 | INFO     | --- collectZombieJob: --- 10, [1511949]
[2025-05-09 05:34:29] 2025-05-09 03:34:18,907 | INFO     | zombie collector waiting for pid 1511949
[2025-05-09 05:34:29] 2025-05-09 03:34:18,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 05:34:29] 2025-05-09 03:34:18,907 | INFO     | collected zombie processes
[2025-05-09 05:34:29] 2025-05-09 03:34:18,907 | INFO     | will attempt to kill all subprocesses of pid=1511949
[2025-05-09 05:34:29] 2025-05-09 03:34:18,948 | INFO     | process IDs to be killed: [1511949] (in reverse order)
[2025-05-09 05:34:29] 2025-05-09 03:34:18,973 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 05:34:29] 2025-05-09 03:34:18,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 05:34:29] 2025-05-09 03:34:18,974 | INFO     | did not find any defunct processes belonging to 1511949
[2025-05-09 05:34:29] 2025-05-09 03:34:18,975 | INFO     | did not find any defunct processes belonging to 1511949
[2025-05-09 05:34:29] 2025-05-09 03:34:18,975 | INFO     | ready for new job
[2025-05-09 05:34:29] 2025-05-09 03:34:18,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 05:34:29] 2025-05-09 03:34:18,976 | INFO     | **************************************
[2025-05-09 05:34:29] 2025-05-09 03:34:18,976 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 05:34:29] 2025-05-09 03:34:18,976 | INFO     | **************************************
[2025-05-09 05:34:29] 2025-05-09 03:34:18,976 | INFO     | 
[2025-05-09 05:34:29] 2025-05-09 03:34:18,976 | INFO     | architecture information:
[2025-05-09 05:34:29] 2025-05-09 03:34:18,977 | INFO     | executing command: cat /etc/os-release
[2025-05-09 05:34:29] 2025-05-09 03:34:18,986 | INFO     | cat /etc/os-release:
[2025-05-09 05:34:29] NAME="CentOS Linux"
[2025-05-09 05:34:29] VERSION="7 (Core)"
[2025-05-09 05:34:29] ID="centos"
[2025-05-09 05:34:29] ID_LIKE="rhel fedora"
[2025-05-09 05:34:29] VERSION_ID="7"
[2025-05-09 05:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 05:34:29] ANSI_COLOR="0;31"
[2025-05-09 05:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 05:34:29] HOME_URL="https://www.centos.org/"
[2025-05-09 05:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 05:34:29] 
[2025-05-09 05:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 05:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 05:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 05:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 05:34:29] 
[2025-05-09 05:34:29] 2025-05-09 03:34:18,986 | INFO     | **************************************
[2025-05-09 05:34:29] 2025-05-09 03:34:19,489 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-09 05:34:29] 2025-05-09 03:34:19,502 | INFO     | sufficient remaining disk space (369027448832 B)
[2025-05-09 05:34:29] 2025-05-09 03:34:19,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 05:34:29] 2025-05-09 03:34:19,502 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 05:34:29] 2025-05-09 03:34:19,502 | INFO     | update_server=False
[2025-05-09 05:34:29] 2025-05-09 03:34:19,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 05:34:29] 2025-05-09 03:34:19,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 05:34:29] 2025-05-09 03:34:19,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 05:34:29] 2025-05-09 03:34:19,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 05:34:29] 2025-05-09 03:34:19,503 | INFO     | aborting loop
[2025-05-09 05:34:29] 2025-05-09 03:34:19,595 | INFO     | all payload control threads have been joined
[2025-05-09 05:34:29] 2025-05-09 03:34:19,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 05:34:29] 2025-05-09 03:34:19,789 | INFO     | all data control threads have been joined
[2025-05-09 05:34:29] 2025-05-09 03:34:20,319 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 05:34:29] 2025-05-09 03:34:20,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 05:34:29] 2025-05-09 03:34:20,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 05:34:29] 2025-05-09 03:34:20,508 | INFO     | [job] retrieve thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:20,508 | INFO     | [job] queue monitor thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:20,508 | INFO     | [job] job monitor thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:20,601 | INFO     | [payload] control thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:20,795 | INFO     | [data] control thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:20,865 | INFO     | [payload] failed_post thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,003 | INFO     | all job control threads have been joined
[2025-05-09 05:34:29] 2025-05-09 03:34:21,101 | INFO     | [data] copytool_in thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,145 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,391 | INFO     | [job] validate thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,508 | INFO     | [data] copytool_out thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,509 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,565 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,677 | INFO     | [payload] validate_post thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:21,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:22,009 | INFO     | [job] control thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:23,767 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 05:34:29] 2025-05-09 03:34:24,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833263470400)>', '<ExcThread(monitor, started 139832776972032)>']
[2025-05-09 05:34:29] 2025-05-09 03:34:24,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 05:34:29] 2025-05-09 03:34:24,341 | INFO     | [monitor] control thread has ended
[2025-05-09 05:34:29] 2025-05-09 03:34:29,321 | INFO     | all workflow threads have been joined
[2025-05-09 05:34:29] 2025-05-09 03:34:29,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 05:34:29] 2025-05-09 03:34:29,321 | INFO     | traces error code: 0
[2025-05-09 05:34:29] 2025-05-09 03:34:29,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 05:34:29] 2025-05-09 03:34:29,371 [wrapper] ==== pilot stdout END ====
[2025-05-09 05:34:29] 2025-05-09 03:34:29,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 05:34:29] 2025-05-09 03:34:29,376 [wrapper] pilotpid: 1505512
[2025-05-09 05:34:29] 2025-05-09 03:34:29,378 [wrapper] Pilot exit status: 0
[2025-05-09 05:34:29] 2025-05-09 03:34:29,386 [wrapper] pandaids: 6638231787
[2025-05-09 05:34:29] 2025-05-09 03:34:29,403 [wrapper] cleanup supervisor_pilot 1524302 1505513
[2025-05-09 05:34:29] 2025-05-09 03:34:29,406 [wrapper] Test setup, not cleaning
[2025-05-09 05:34:29] 2025-05-09 03:34:29,408 [wrapper] apfmon messages muted
[2025-05-09 05:34:29] 2025-05-09 03:34:29,410 [wrapper] ==== wrapper stdout END ====
[2025-05-09 05:34:29] 2025-05-09 03:34:29,413 [wrapper] ==== wrapper stderr END ====
[2025-05-09 05:34:29]  *** Error codes and diagnostics ***
[2025-05-09 05:34:29]     "exeErrorCode": 0,
[2025-05-09 05:34:29]     "exeErrorDiag": "",
[2025-05-09 05:34:29]     "pilotErrorCode": 0,
[2025-05-09 05:34:29]     "pilotErrorDiag": "",
[2025-05-09 05:34:29]  *** Listing of results directory ***
[2025-05-09 05:34:29] total 419452
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc    495897 May  8 12:35 pilot3.tar.gz
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc      5111 May  8 13:11 queuedata.json
[2025-05-09 05:34:29] -rwx------ 1 boinc boinc     37140 May  8 13:11 runpilot2-wrapper.sh
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc       100 May  9 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 05:34:29] -rwxr-xr-x 1 boinc boinc      7986 May  9 03:54 run_atlas
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc       105 May  9 03:54 job.xml
[2025-05-09 05:34:29] -rw-r--r-- 2 boinc boinc 221604746 May  9 03:54 EVNT.44506061._001955.pool.root.1
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc      6931 May  9 03:54 init_data.xml
[2025-05-09 05:34:29] drwxrwx--x 2 boinc boinc      4096 May  9 03:54 shared
[2025-05-09 05:34:29] -rw-r--r-- 2 boinc boinc    508876 May  9 03:54 input.tar.gz
[2025-05-09 05:34:29] -rw-r--r-- 2 boinc boinc     17569 May  9 03:54 start_atlas.sh
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc         0 May  9 03:54 boinc_lockfile
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc      2557 May  9 03:54 pandaJob.out
[2025-05-09 05:34:29] -rw------- 1 boinc boinc       424 May  9 03:54 setup.sh.local
[2025-05-09 05:34:29] -rw------- 1 boinc boinc    997945 May  9 03:54 agis_schedconf.cvmfs.json
[2025-05-09 05:34:29] -rw------- 1 boinc boinc   1596741 May  9 03:54 agis_ddmendpoints.agis.ALL.json
[2025-05-09 05:34:29] drwx------ 4 boinc boinc      4096 May  9 03:54 pilot3
[2025-05-09 05:34:29] -rw------- 1 boinc boinc        95 May  9 05:33 pilot_heartbeat.json
[2025-05-09 05:34:29] -rw------- 1 boinc boinc 202426108 May  9 05:33 HITS.44506063._053166.pool.root.1
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc       529 May  9 05:34 boinc_task_state.xml
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc      8192 May  9 05:34 boinc_mmap_file
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc        27 May  9 05:34 wrapper_checkpoint.txt
[2025-05-09 05:34:29] -rw------- 1 boinc boinc      1016 May  9 05:34 memory_monitor_summary.json
[2025-05-09 05:34:29] -rw------- 1 boinc boinc    246366 May  9 05:34 log.44506063._053166.job.log.tgz.1
[2025-05-09 05:34:29] -rw------- 1 boinc boinc      7662 May  9 05:34 heartbeat.json
[2025-05-09 05:34:29] -rw------- 1 boinc boinc      4357 May  9 05:34 pilotlog.txt
[2025-05-09 05:34:29] -rw------- 1 boinc boinc    570368 May  9 05:34 log.44506063._053166.job.log.1
[2025-05-09 05:34:29] -rw------- 1 boinc boinc       357 May  9 05:34 output.list
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc       620 May  9 05:34 runtime_log
[2025-05-09 05:34:29] -rw------- 1 boinc boinc    839680 May  9 05:34 result.tar.gz
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc     11114 May  9 05:34 runtime_log.err
[2025-05-09 05:34:29] -rw------- 1 boinc boinc       661 May  9 05:34 bHRLDmHLEX7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmWiJLDmWvoXvn.diag
[2025-05-09 05:34:29] -rw-r--r-- 1 boinc boinc     20841 May  9 05:34 stderr.txt
[2025-05-09 05:34:29] HITS file was successfully produced:
[2025-05-09 05:34:29] -rw------- 1 boinc boinc 202426108 May  9 05:33 shared/HITS.pool.root.1
[2025-05-09 05:34:29]  *** Contents of shared directory: ***
[2025-05-09 05:34:29] total 415444
[2025-05-09 05:34:29] -rw-r--r-- 2 boinc boinc 221604746 May  9 03:54 ATLAS.root_0
[2025-05-09 05:34:29] -rw-r--r-- 2 boinc boinc    508876 May  9 03:54 input.tar.gz
[2025-05-09 05:34:29] -rw-r--r-- 2 boinc boinc     17569 May  9 03:54 start_atlas.sh
[2025-05-09 05:34:29] -rw------- 1 boinc boinc 202426108 May  9 05:33 HITS.pool.root.1
[2025-05-09 05:34:29] -rw------- 1 boinc boinc    839680 May  9 05:34 result.tar.gz
05:34:30 (1501862): run_atlas exited; CPU time 15968.446706
05:34:30 (1501862): called boinc_finish(0)

</stderr_txt>
]]>

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