Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:02:15 (1475696): wrapper (7.7.26015): starting
13:02:15 (1475696): wrapper: running run_atlas (--nthreads 8)
[2025-05-08 13:02:15] Arguments: --nthreads 8
[2025-05-08 13:02:15] Threads: 8
[2025-05-08 13:02:15] Checking for CVMFS
[2025-05-08 13:02:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 13:02:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 13:02:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 13:02:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 13:02:15] 2.11.3.0 22321 364161 210836 145768 3 271 37317638 45568000 9835 130560 0 1656222163 99.737 1451785218 20254 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-05-08 13:02:15] CVMFS is ok
[2025-05-08 13:02:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 13:02:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 13:02:15] Further information can be found at the LHC@home message board.
[2025-05-08 13:02:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 13:02:15] Checking for apptainer binary...
[2025-05-08 13:02:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 13:02:15] Running /usr/bin/apptainer --version
[2025-05-08 13:02:15] apptainer version 1.3.3-1.el9
[2025-05-08 13:02:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 13:02:15] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0006.triumf.lcg
[2025-05-08 13:02:15] apptainer works
[2025-05-08 13:02:15] Set ATHENA_PROC_NUMBER=8
[2025-05-08 13:02:15] Set ATHENA_CORE_NUMBER=8
[2025-05-08 13:02:15] Starting ATLAS job with PandaID=6637937490
[2025-05-08 13:02:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 15:20:48]  *** The last 200 lines of the pilot log: ***
[2025-05-08 15:20:48] 2025-05-08 22:20:37,006 | INFO     | mean y: 2425240.5588235296
[2025-05-08 15:20:48] 2025-05-08 22:20:37,006 | INFO     | -- intersect: -120834944426.03145
[2025-05-08 15:20:48] 2025-05-08 22:20:37,006 | INFO     | intersect: -120834944426.03145
[2025-05-08 15:20:48] 2025-05-08 22:20:37,007 | INFO     | chi2: 5.165769465932275
[2025-05-08 15:20:48] 2025-05-08 22:20:37,016 | INFO     | sum of square deviations: 697007806.7328265
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | sum of deviations: 60921986868.09924
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | mean x: 1746738535.5114503
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | mean y: 2437596.2671755725
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | -- intersect: -152671293019.81165
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | intersect: -152671293019.81165
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | chi2: 4.444672697057745
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | current chi2=4.444672697057745 (change=13.959135684046498 %)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,017 | INFO     | right removable region: 130
[2025-05-08 15:20:48] 2025-05-08 22:20:37,018 | INFO     | sum of square deviations: 696966936.7328265
[2025-05-08 15:20:48] 2025-05-08 22:20:37,018 | INFO     | sum of deviations: 22524150976.419846
[2025-05-08 15:20:48] 2025-05-08 22:20:37,018 | INFO     | mean x: 1746738840.5114503
[2025-05-08 15:20:48] 2025-05-08 22:20:37,018 | INFO     | mean y: 2482754.0534351147
[2025-05-08 15:20:48] 2025-05-08 22:20:37,018 | INFO     | -- intersect: -56447554236.92424
[2025-05-08 15:20:48] 2025-05-08 22:20:37,018 | INFO     | intersect: -56447554236.92424
[2025-05-08 15:20:48] 2025-05-08 22:20:37,019 | INFO     | chi2: 2.869789398171158
[2025-05-08 15:20:48] 2025-05-08 22:20:37,019 | INFO     | current chi2=2.869789398171158 (change=44.44604202535309 %)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,019 | INFO     | sum of square deviations: 620135757.873014
[2025-05-08 15:20:48] 2025-05-08 22:20:37,019 | INFO     | sum of deviations: 1230020983.6666622
[2025-05-08 15:20:48] 2025-05-08 22:20:37,019 | INFO     | mean x: 1746738993.0317461
[2025-05-08 15:20:48] 2025-05-08 22:20:37,020 | INFO     | mean y: 2525036.8333333335
[2025-05-08 15:20:48] 2025-05-08 22:20:37,020 | INFO     | -- intersect: -3462080232.482196
[2025-05-08 15:20:48] 2025-05-08 22:20:37,020 | INFO     | intersect: -3462080232.482196
[2025-05-08 15:20:48] 2025-05-08 22:20:37,020 | INFO     | chi2: 1.8684294670028503
[2025-05-08 15:20:48] 2025-05-08 22:20:37,020 | INFO     | current chi2=1.8684294670028503 (change=34.893150410495224 %)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,020 | INFO     | sum of square deviations: 549165153.900828
[2025-05-08 15:20:48] 2025-05-08 22:20:37,021 | INFO     | sum of deviations: -19066138663.719
[2025-05-08 15:20:48] 2025-05-08 22:20:37,021 | INFO     | mean x: 1746739145.553719
[2025-05-08 15:20:48] 2025-05-08 22:20:37,021 | INFO     | mean y: 2568425.26446281
[2025-05-08 15:20:48] 2025-05-08 22:20:37,021 | INFO     | -- intersect: 60646566905.34181
[2025-05-08 15:20:48] 2025-05-08 22:20:37,021 | INFO     | intersect: 60646566905.34181
[2025-05-08 15:20:48] 2025-05-08 22:20:37,021 | INFO     | chi2: 0.7836924097579625
[2025-05-08 15:20:48] 2025-05-08 22:20:37,022 | INFO     | current chi2=0.7836924097579625 (change=58.05608808904709 %)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,022 | INFO     | sum of square deviations: 483822562.3017241
[2025-05-08 15:20:48] 2025-05-08 22:20:37,022 | INFO     | sum of deviations: -21009041813.155174
[2025-05-08 15:20:48] 2025-05-08 22:20:37,022 | INFO     | mean x: 1746739298.0775862
[2025-05-08 15:20:48] 2025-05-08 22:20:37,022 | INFO     | mean y: 2572833.0172413792
[2025-05-08 15:20:48] 2025-05-08 22:20:37,022 | INFO     | -- intersect: 75851286409.76843
[2025-05-08 15:20:48] 2025-05-08 22:20:37,022 | INFO     | intersect: 75851286409.76843
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | chi2: 0.7369950312484994
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | current chi2=0.7369950312484994 (change=5.958636057721323 %)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | left removable region: 40
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | sum of square deviations: 225899814.09999987
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | sum of deviations: -8881080588.500002
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | mean x: 1746739725.1
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | mean y: 2583425.1666666665
[2025-05-08 15:20:48] 2025-05-08 22:20:37,023 | INFO     | -- intersect: 68674336554.10139
[2025-05-08 15:20:48] 2025-05-08 22:20:37,024 | INFO     | intersect: 68674336554.10139
[2025-05-08 15:20:48] 2025-05-08 22:20:37,024 | INFO     | chi2: 0.020125858500973866
[2025-05-08 15:20:48] 2025-05-08 22:20:37,024 | INFO     | -- intersect: 68674336554.10139
[2025-05-08 15:20:48] 2025-05-08 22:20:37,024 | INFO     | current memory leak: -39.31 B/s (using 90 data points, chi2=0.02)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,024 | INFO     | ..............................
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . Timing measurements:
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . get job = 0 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . initial setup = 3 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . payload setup = 5 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . stage-in = 0 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . payload execution = 8260 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . stage-out = 0 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | . log creation = 0 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,025 | INFO     | ..............................
[2025-05-08 15:20:48] 2025-05-08 22:20:37,099 | INFO     | 
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | job summary report
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | --------------------------------------------------
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | PanDA job id: 6637937490
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | task id: 44506063
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | errors: (none)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | pilot state: finished 
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | transexitcode: 0
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | exeerrorcode: 0
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | exeerrordiag: 
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | exitcode: 0
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | exitmsg: OK
[2025-05-08 15:20:48] 2025-05-08 22:20:37,100 | INFO     | cpuconsumptiontime: 36409 s
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | nevents: 400
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | neventsw: 0
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | pid: 1485591
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | pgrp: 1485591
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | corecount: 8
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | event service: False
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | sizes: {0: 2393736, 4: 2393942, 11: 2393970, 8270: 2421645, 8271: 2430580, 8273: 2430636, 8277: 2430934}
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | --------------------------------------------------
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | 
[2025-05-08 15:20:48] 2025-05-08 22:20:37,101 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-08 15:20:48] 2025-05-08 22:20:37,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,117 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,118 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 15:20:48] 2025-05-08 22:20:37,119 | INFO     | job 6637937490 has completed (purged errors)
[2025-05-08 15:20:48] 2025-05-08 22:20:37,119 | INFO     | overall cleanup function is called
[2025-05-08 15:20:48] 2025-05-08 22:20:38,126 | INFO     | --- collectZombieJob: --- 10, [1485591]
[2025-05-08 15:20:48] 2025-05-08 22:20:38,126 | INFO     | zombie collector waiting for pid 1485591
[2025-05-08 15:20:48] 2025-05-08 22:20:38,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 15:20:48] 2025-05-08 22:20:38,126 | INFO     | collected zombie processes
[2025-05-08 15:20:48] 2025-05-08 22:20:38,126 | INFO     | will attempt to kill all subprocesses of pid=1485591
[2025-05-08 15:20:48] 2025-05-08 22:20:38,333 | INFO     | process IDs to be killed: [1485591] (in reverse order)
[2025-05-08 15:20:48] 2025-05-08 22:20:38,457 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 15:20:48] 2025-05-08 22:20:38,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 15:20:48] 2025-05-08 22:20:38,463 | INFO     | did not find any defunct processes belonging to 1485591
[2025-05-08 15:20:48] 2025-05-08 22:20:38,469 | INFO     | did not find any defunct processes belonging to 1485591
[2025-05-08 15:20:48] 2025-05-08 22:20:38,469 | INFO     | ready for new job
[2025-05-08 15:20:48] 2025-05-08 22:20:38,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 15:20:48] 2025-05-08 22:20:38,474 | INFO     | **************************************
[2025-05-08 15:20:48] 2025-05-08 22:20:38,474 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 15:20:48] 2025-05-08 22:20:38,475 | INFO     | **************************************
[2025-05-08 15:20:48] 2025-05-08 22:20:38,475 | INFO     | 
[2025-05-08 15:20:48] 2025-05-08 22:20:38,489 | INFO     | architecture information:
[2025-05-08 15:20:48] 2025-05-08 22:20:38,490 | INFO     | executing command: cat /etc/os-release
[2025-05-08 15:20:48] 2025-05-08 22:20:38,507 | INFO     | cat /etc/os-release:
[2025-05-08 15:20:48] NAME="CentOS Linux"
[2025-05-08 15:20:48] VERSION="7 (Core)"
[2025-05-08 15:20:48] ID="centos"
[2025-05-08 15:20:48] ID_LIKE="rhel fedora"
[2025-05-08 15:20:48] VERSION_ID="7"
[2025-05-08 15:20:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 15:20:48] ANSI_COLOR="0;31"
[2025-05-08 15:20:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 15:20:48] HOME_URL="https://www.centos.org/"
[2025-05-08 15:20:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 15:20:48] 
[2025-05-08 15:20:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 15:20:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 15:20:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 15:20:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 15:20:48] 
[2025-05-08 15:20:48] 2025-05-08 22:20:38,507 | INFO     | **************************************
[2025-05-08 15:20:48] 2025-05-08 22:20:39,004 | INFO     | PID=1479270 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-08 15:20:48] 2025-05-08 22:20:39,004 | INFO     | .. there are 12 such processes running
[2025-05-08 15:20:48] 2025-05-08 22:20:39,011 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-08 15:20:48] 2025-05-08 22:20:39,025 | INFO     | sufficient remaining disk space (1287594704896 B)
[2025-05-08 15:20:48] 2025-05-08 22:20:39,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | INFO     | update_server=False
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 15:20:48] 2025-05-08 22:20:39,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 15:20:48] 2025-05-08 22:20:39,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 15:20:48] 2025-05-08 22:20:39,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 15:20:48] 2025-05-08 22:20:39,108 | INFO     | all payload control threads have been joined
[2025-05-08 15:20:48] 2025-05-08 22:20:39,201 | INFO     | all data control threads have been joined
[2025-05-08 15:20:48] 2025-05-08 22:20:39,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 15:20:48] 2025-05-08 22:20:39,601 | INFO     | aborting loop
[2025-05-08 15:20:48] 2025-05-08 22:20:39,613 | INFO     | all job control threads have been joined
[2025-05-08 15:20:48] 2025-05-08 22:20:40,031 | INFO     | [job] retrieve thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,032 | INFO     | [job] queue monitor thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,043 | INFO     | [data] copytool_in thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,060 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,114 | INFO     | [payload] control thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,207 | INFO     | [data] control thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,389 | INFO     | [job] validate thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,606 | INFO     | [job] job monitor thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,617 | INFO     | [payload] failed_post thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,619 | INFO     | [job] control thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,858 | INFO     | [payload] validate_post thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,879 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:40,949 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:41,041 | INFO     | [data] copytool_out thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:41,261 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:43,036 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 15:20:48] 2025-05-08 22:20:43,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747148130112)>', '<ExcThread(monitor, started 139746609190656)>']
[2025-05-08 15:20:48] 2025-05-08 22:20:44,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 15:20:48] 2025-05-08 22:20:44,056 | INFO     | [monitor] control thread has ended
[2025-05-08 15:20:48] 2025-05-08 22:20:48,496 | INFO     | all workflow threads have been joined
[2025-05-08 15:20:48] 2025-05-08 22:20:48,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 15:20:48] 2025-05-08 22:20:48,497 | INFO     | traces error code: 0
[2025-05-08 15:20:48] 2025-05-08 22:20:48,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 15:20:48] 2025-05-08 22:20:48,631 [wrapper] ==== pilot stdout END ====
[2025-05-08 15:20:48] 2025-05-08 22:20:48,633 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 15:20:48] 2025-05-08 22:20:48,634 [wrapper] pilotpid: 1479270
[2025-05-08 15:20:48] 2025-05-08 22:20:48,636 [wrapper] Pilot exit status: 0
[2025-05-08 15:20:48] 2025-05-08 22:20:48,648 [wrapper] pandaids: 6637937490
[2025-05-08 15:20:48] 2025-05-08 22:20:48,678 [wrapper] cleanup supervisor_pilot 1939703 1479271
[2025-05-08 15:20:48] 2025-05-08 22:20:48,680 [wrapper] Test setup, not cleaning
[2025-05-08 15:20:48] 2025-05-08 22:20:48,682 [wrapper] apfmon messages muted
[2025-05-08 15:20:48] 2025-05-08 22:20:48,684 [wrapper] ==== wrapper stdout END ====
[2025-05-08 15:20:48] 2025-05-08 22:20:48,685 [wrapper] ==== wrapper stderr END ====
[2025-05-08 15:20:48]  *** Error codes and diagnostics ***
[2025-05-08 15:20:48]     "exeErrorCode": 0,
[2025-05-08 15:20:48]     "exeErrorDiag": "",
[2025-05-08 15:20:48]     "pilotErrorCode": 0,
[2025-05-08 15:20:48]     "pilotErrorDiag": "",
[2025-05-08 15:20:48]  *** Listing of results directory ***
[2025-05-08 15:20:48] total 408816
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc    495897 May  7 20:52 pilot3.tar.gz
[2025-05-08 15:20:48] -rwx------. 1 boinc boinc     37140 May  7 20:54 runpilot2-wrapper.sh
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc      5111 May  7 20:54 queuedata.json
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc       100 May  8 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 15:20:48] -rwxr-xr-x. 1 boinc boinc      7986 May  8 13:02 run_atlas
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc       105 May  8 13:02 job.xml
[2025-05-08 15:20:48] -rw-r--r--. 2 boinc boinc 220994676 May  8 13:02 EVNT.44506061._002052.pool.root.1
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc      6453 May  8 13:02 init_data.xml
[2025-05-08 15:20:48] -rw-r--r--. 2 boinc boinc     17569 May  8 13:02 start_atlas.sh
[2025-05-08 15:20:48] drwxrwx--x. 2 boinc boinc      4096 May  8 13:02 shared
[2025-05-08 15:20:48] -rw-r--r--. 2 boinc boinc    508875 May  8 13:02 input.tar.gz
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc         0 May  8 13:02 boinc_lockfile
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc      2558 May  8 13:02 pandaJob.out
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc       424 May  8 13:02 setup.sh.local
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc    997887 May  8 13:02 agis_schedconf.cvmfs.json
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc   1596741 May  8 13:02 agis_ddmendpoints.agis.ALL.json
[2025-05-08 15:20:48] drwx------. 4 boinc boinc      4096 May  8 13:02 pilot3
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc 191537896 May  8 15:19 HITS.44506063._048164.pool.root.1
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc        95 May  8 15:19 pilot_heartbeat.json
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc       529 May  8 15:20 boinc_task_state.xml
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc      1035 May  8 15:20 memory_monitor_summary.json
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc    352249 May  8 15:20 log.44506063._048164.job.log.tgz.1
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc      8192 May  8 15:20 boinc_mmap_file
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc        27 May  8 15:20 wrapper_checkpoint.txt
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc      7717 May  8 15:20 heartbeat.json
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc      4870 May  8 15:20 pilotlog.txt
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc    773702 May  8 15:20 log.44506063._048164.job.log.1
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc       357 May  8 15:20 output.list
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc       620 May  8 15:20 runtime_log
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc   1146880 May  8 15:20 result.tar.gz
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc     11142 May  8 15:20 runtime_log.err
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc       659 May  8 15:20 IPtMDmJW7W7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVH8LDmBwrpMo.diag
[2025-05-08 15:20:48] -rw-r--r--. 1 boinc boinc     21115 May  8 15:20 stderr.txt
[2025-05-08 15:20:48] HITS file was successfully produced:
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc 191537896 May  8 15:19 shared/HITS.pool.root.1
[2025-05-08 15:20:48]  *** Contents of shared directory: ***
[2025-05-08 15:20:48] total 404512
[2025-05-08 15:20:48] -rw-r--r--. 2 boinc boinc 220994676 May  8 13:02 ATLAS.root_0
[2025-05-08 15:20:48] -rw-r--r--. 2 boinc boinc     17569 May  8 13:02 start_atlas.sh
[2025-05-08 15:20:48] -rw-r--r--. 2 boinc boinc    508875 May  8 13:02 input.tar.gz
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc 191537896 May  8 15:19 HITS.pool.root.1
[2025-05-08 15:20:48] -rw-------. 1 boinc boinc   1146880 May  8 15:20 result.tar.gz
15:20:50 (1475696): run_atlas exited; CPU time 36466.815375
15:20:50 (1475696): called boinc_finish(0)

</stderr_txt>
]]>

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