Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:30:54 (6446): wrapper (7.7.26015): starting
02:30:54 (6446): wrapper: running run_atlas (--nthreads 8)
[2025-05-09 02:30:54] Arguments: --nthreads 8
[2025-05-09 02:30:54] Threads: 8
[2025-05-09 02:30:54] Checking for CVMFS
[2025-05-09 02:30:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 02:30:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 02:30:55] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 02:30:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 02:30:55] 2.11.2.0 12829 5357 84668 145775 2 52 18191004 25165824 932 130560 0 5193291 99.901 2242164 3146 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-09 02:30:55] CVMFS is ok
[2025-05-09 02:30:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 02:30:55] Checking for apptainer binary...
[2025-05-09 02:30:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 02:30:55] Running /usr/bin/apptainer --version
[2025-05-09 02:30:55] apptainer version 1.3.2-1.el7
[2025-05-09 02:30:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 02:30:56] cg-vwn500.simple-grid.lan
[2025-05-09 02:30:56] apptainer works
[2025-05-09 02:30:56] Set ATHENA_PROC_NUMBER=8
[2025-05-09 02:30:56] Set ATHENA_CORE_NUMBER=8
[2025-05-09 02:30:56] Starting ATLAS job with PandaID=6638230428
[2025-05-09 02:30:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 16:36:12]  *** The last 200 lines of the pilot log: ***
[2025-05-09 16:36:12] 2025-05-09 04:13:55,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 16:36:12] 2025-05-09 04:13:55,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 16:36:12] 2025-05-09 04:13:55,949 | INFO     | fitting pss+swap vs Time
[2025-05-09 16:36:12] 2025-05-09 04:13:55,950 | INFO     | sum of square deviations: 3168461268.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,951 | INFO     | sum of deviations: 42778237685.00001
[2025-05-09 16:36:12] 2025-05-09 04:13:55,951 | INFO     | mean x: 1746757294.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,951 | INFO     | mean y: 2473975.4976958525
[2025-05-09 16:36:12] 2025-05-09 04:13:55,952 | INFO     | -- intersect: -23580960499.59258
[2025-05-09 16:36:12] 2025-05-09 04:13:55,952 | INFO     | intersect: -23580960499.59258
[2025-05-09 16:36:12] 2025-05-09 04:13:55,952 | INFO     | chi2: 5.379893867330225
[2025-05-09 16:36:12] 2025-05-09 04:13:55,953 | INFO     | sum of square deviations: 2954447953.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,957 | INFO     | sum of deviations: 56342080443.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,957 | INFO     | mean x: 1746757141.5
[2025-05-09 16:36:12] 2025-05-09 04:13:55,958 | INFO     | mean y: 2483448.867924528
[2025-05-09 16:36:12] 2025-05-09 04:13:55,958 | INFO     | -- intersect: -33308623379.344913
[2025-05-09 16:36:12] 2025-05-09 04:13:55,958 | INFO     | intersect: -33308623379.344913
[2025-05-09 16:36:12] 2025-05-09 04:13:55,958 | INFO     | chi2: 4.646497410928502
[2025-05-09 16:36:12] 2025-05-09 04:13:55,958 | INFO     | current chi2=4.646497410928502 (change=13.632173319539312 %)
[2025-05-09 16:36:12] 2025-05-09 04:13:55,958 | INFO     | right removable region: 211
[2025-05-09 16:36:12] 2025-05-09 04:13:55,959 | INFO     | sum of square deviations: 2954447953.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,960 | INFO     | sum of deviations: -12165884072.499985
[2025-05-09 16:36:12] 2025-05-09 04:13:55,961 | INFO     | mean x: 1746757446.5
[2025-05-09 16:36:12] 2025-05-09 04:13:55,961 | INFO     | mean y: 2513010.5141509436
[2025-05-09 16:36:12] 2025-05-09 04:13:55,961 | INFO     | -- intersect: 7195345287.460034
[2025-05-09 16:36:12] 2025-05-09 04:13:55,961 | INFO     | intersect: 7195345287.460034
[2025-05-09 16:36:12] 2025-05-09 04:13:55,961 | INFO     | chi2: 2.6732018343655946
[2025-05-09 16:36:12] 2025-05-09 04:13:55,961 | INFO     | current chi2=2.6732018343655946 (change=50.31125333905197 %)
[2025-05-09 16:36:12] 2025-05-09 04:13:55,962 | INFO     | sum of square deviations: 2750295288.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,963 | INFO     | sum of deviations: -52345215018.999985
[2025-05-09 16:36:12] 2025-05-09 04:13:55,964 | INFO     | mean x: 1746757599.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,964 | INFO     | mean y: 2543025.690821256
[2025-05-09 16:36:12] 2025-05-09 04:13:55,964 | INFO     | -- intersect: 33247846722.59595
[2025-05-09 16:36:12] 2025-05-09 04:13:55,964 | INFO     | intersect: 33247846722.59595
[2025-05-09 16:36:12] 2025-05-09 04:13:55,964 | INFO     | chi2: 1.295305788805761
[2025-05-09 16:36:12] 2025-05-09 04:13:55,965 | INFO     | current chi2=1.295305788805761 (change=51.54478153673856 %)
[2025-05-09 16:36:12] 2025-05-09 04:13:55,965 | INFO     | sum of square deviations: 2555770710.5
[2025-05-09 16:36:12] 2025-05-09 04:13:55,966 | INFO     | sum of deviations: -63791867367.49999
[2025-05-09 16:36:12] 2025-05-09 04:13:55,967 | INFO     | mean x: 1746757751.5
[2025-05-09 16:36:12] 2025-05-09 04:13:55,967 | INFO     | mean y: 2551859.836633663
[2025-05-09 16:36:12] 2025-05-09 04:13:55,967 | INFO     | -- intersect: 43601509445.91877
[2025-05-09 16:36:12] 2025-05-09 04:13:55,967 | INFO     | intersect: 43601509445.91877
[2025-05-09 16:36:12] 2025-05-09 04:13:55,970 | INFO     | chi2: 0.9916365395266384
[2025-05-09 16:36:12] 2025-05-09 04:13:55,970 | INFO     | current chi2=0.9916365395266384 (change=23.443827079557636 %)
[2025-05-09 16:36:12] 2025-05-09 04:13:55,971 | INFO     | left removable region: 30
[2025-05-09 16:36:12] 2025-05-09 04:13:55,971 | INFO     | sum of square deviations: 1838657730.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,972 | INFO     | sum of deviations: -29740419582.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,972 | INFO     | mean x: 1746758026.0
[2025-05-09 16:36:12] 2025-05-09 04:13:55,973 | INFO     | mean y: 2546900.552486188
[2025-05-09 16:36:12] 2025-05-09 04:13:55,973 | INFO     | -- intersect: 28256482232.750538
[2025-05-09 16:36:12] 2025-05-09 04:13:55,973 | INFO     | intersect: 28256482232.750538
[2025-05-09 16:36:12] 2025-05-09 04:13:55,973 | INFO     | chi2: 0.1706998070633387
[2025-05-09 16:36:12] 2025-05-09 04:13:55,973 | INFO     | -- intersect: 28256482232.750538
[2025-05-09 16:36:12] 2025-05-09 04:13:55,973 | INFO     | current memory leak: -16.18 B/s (using 181 data points, chi2=0.17)
[2025-05-09 16:36:12] 2025-05-09 04:13:55,974 | INFO     | ..............................
[2025-05-09 16:36:12] 2025-05-09 04:13:55,974 | INFO     | . Timing measurements:
[2025-05-09 16:36:12] 2025-05-09 04:13:55,974 | INFO     | . get job = 0 s
[2025-05-09 16:36:12] 2025-05-09 04:13:55,974 | INFO     | . initial setup = 2 s
[2025-05-09 16:36:12] 2025-05-09 04:13:55,975 | INFO     | . payload setup = 7 s
[2025-05-09 16:36:12] 2025-05-09 04:13:55,975 | INFO     | . stage-in = 0 s
[2025-05-09 16:36:12] 2025-05-09 04:13:55,975 | INFO     | . payload execution = 13215 s
[2025-05-09 16:36:12] 2025-05-09 04:13:55,975 | INFO     | . stage-out = 4 s
[2025-05-09 16:36:12] 2025-05-09 04:13:55,975 | INFO     | . log creation = 1 s
[2025-05-09 16:36:12] 2025-05-09 04:13:55,975 | INFO     | ..............................
[2025-05-09 16:36:12] 2025-05-09 04:13:56,103 | INFO     | 
[2025-05-09 16:36:12] 2025-05-09 04:13:56,103 | INFO     | job summary report
[2025-05-09 16:36:12] 2025-05-09 04:13:56,103 | INFO     | --------------------------------------------------
[2025-05-09 16:36:12] 2025-05-09 04:13:56,103 | INFO     | PanDA job id: 6638230428
[2025-05-09 16:36:12] 2025-05-09 04:13:56,103 | INFO     | task id: 44506063
[2025-05-09 16:36:12] 2025-05-09 04:13:56,103 | INFO     | errors: (none)
[2025-05-09 16:36:12] 2025-05-09 04:13:56,103 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | pilot state: finished 
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | transexitcode: 0
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | exeerrorcode: 0
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | exeerrordiag: 
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | exitcode: 0
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | exitmsg: OK
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | cpuconsumptiontime: 56325 s
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | nevents: 400
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | neventsw: 0
[2025-05-09 16:36:12] 2025-05-09 04:13:56,104 | INFO     | pid: 16849
[2025-05-09 16:36:12] 2025-05-09 04:13:56,105 | INFO     | pgrp: 16849
[2025-05-09 16:36:12] 2025-05-09 04:13:56,105 | INFO     | corecount: 8
[2025-05-09 16:36:12] 2025-05-09 04:13:56,105 | INFO     | event service: False
[2025-05-09 16:36:12] 2025-05-09 04:13:56,105 | INFO     | sizes: {0: 2393568, 1: 2393767, 7: 2393973, 12: 2394001, 13227: 2423491, 13231: 2432432, 13233: 2432616, 13345: 2432786}
[2025-05-09 16:36:12] 2025-05-09 04:13:56,105 | INFO     | --------------------------------------------------
[2025-05-09 16:36:12] 2025-05-09 04:13:56,105 | INFO     | 
[2025-05-09 16:36:12] 2025-05-09 04:13:56,105 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-05-09 16:36:12] 2025-05-09 04:13:56,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 16:36:12] 2025-05-09 04:13:56,553 | INFO     | job 6638230428 has completed (purged errors)
[2025-05-09 16:36:12] 2025-05-09 04:13:56,553 | INFO     | overall cleanup function is called
[2025-05-09 16:36:12] 2025-05-09 04:13:57,561 | INFO     | --- collectZombieJob: --- 10, [16849]
[2025-05-09 16:36:12] 2025-05-09 04:13:57,561 | INFO     | zombie collector waiting for pid 16849
[2025-05-09 16:36:12] 2025-05-09 04:13:57,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 16:36:12] 2025-05-09 04:13:57,562 | INFO     | collected zombie processes
[2025-05-09 16:36:12] 2025-05-09 04:13:57,562 | INFO     | will attempt to kill all subprocesses of pid=16849
[2025-05-09 16:36:12] 2025-05-09 04:13:57,628 | INFO     | process IDs to be killed: [16849] (in reverse order)
[2025-05-09 16:36:12] 2025-05-09 04:13:57,672 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 16:36:12] 2025-05-09 04:13:57,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 16:36:12] 2025-05-09 04:13:57,674 | INFO     | did not find any defunct processes belonging to 16849
[2025-05-09 16:36:12] 2025-05-09 04:13:57,676 | INFO     | did not find any defunct processes belonging to 16849
[2025-05-09 16:36:12] 2025-05-09 04:13:57,676 | INFO     | ready for new job
[2025-05-09 16:36:12] 2025-05-09 04:13:57,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 16:36:12] 2025-05-09 04:13:57,678 | INFO     | **************************************
[2025-05-09 16:36:12] 2025-05-09 04:13:57,678 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 16:36:12] 2025-05-09 04:13:57,678 | INFO     | **************************************
[2025-05-09 16:36:12] 2025-05-09 04:13:57,678 | INFO     | 
[2025-05-09 16:36:12] 2025-05-09 04:13:57,679 | INFO     | pilot is running in a VM
[2025-05-09 16:36:12] 2025-05-09 04:13:57,679 | INFO     | architecture information:
[2025-05-09 16:36:12] 2025-05-09 04:13:57,680 | INFO     | executing command: cat /etc/os-release
[2025-05-09 16:36:12] 2025-05-09 04:13:57,752 | INFO     | cat /etc/os-release:
[2025-05-09 16:36:12] NAME="CentOS Linux"
[2025-05-09 16:36:12] VERSION="7 (Core)"
[2025-05-09 16:36:12] ID="centos"
[2025-05-09 16:36:12] ID_LIKE="rhel fedora"
[2025-05-09 16:36:12] VERSION_ID="7"
[2025-05-09 16:36:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 16:36:12] ANSI_COLOR="0;31"
[2025-05-09 16:36:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 16:36:12] HOME_URL="https://www.centos.org/"
[2025-05-09 16:36:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 16:36:12] 
[2025-05-09 16:36:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 16:36:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 16:36:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 16:36:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 16:36:12] 
[2025-05-09 16:36:12] 2025-05-09 04:13:57,752 | INFO     | **************************************
[2025-05-09 16:36:12] 2025-05-09 04:13:58,255 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-05-09 16:36:12] 2025-05-09 04:13:58,525 | INFO     | sufficient remaining disk space (497848156160 B)
[2025-05-09 16:36:12] 2025-05-09 04:13:58,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 16:36:12] 2025-05-09 04:13:58,526 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 16:36:12] 2025-05-09 04:13:58,526 | INFO     | update_server=False
[2025-05-09 16:36:12] 2025-05-09 04:13:58,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 16:36:12] 2025-05-09 04:13:58,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 16:36:12] 2025-05-09 04:13:58,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 16:36:12] 2025-05-09 04:13:58,813 | INFO     | PID=10320 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-09 16:36:12] 2025-05-09 04:13:58,814 | INFO     | .. there are 2 such processes running
[2025-05-09 16:36:12] 2025-05-09 04:13:58,814 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 16:36:12] 2025-05-09 04:13:58,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 16:36:12] 2025-05-09 04:13:58,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 16:36:12] 2025-05-09 04:13:58,833 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-09 16:36:12] 2025-05-09 04:13:58,834 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-09 16:36:12] 2025-05-09 04:13:58,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 16:36:12] 2025-05-09 04:13:58,834 | INFO     | will abort loop
[2025-05-09 16:36:12] 2025-05-09 04:13:59,157 | INFO     | all data control threads have been joined
[2025-05-09 16:36:12] 2025-05-09 04:13:59,531 | INFO     | [job] retrieve thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:13:59,534 | INFO     | [payload] validate_post thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:13:59,689 | INFO     | all payload control threads have been joined
[2025-05-09 16:36:12] 2025-05-09 04:13:59,724 | INFO     | all job control threads have been joined
[2025-05-09 16:36:12] 2025-05-09 04:13:59,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:13:59,839 | INFO     | [job] job monitor thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,163 | INFO     | [data] control thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,295 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,400 | INFO     | [payload] failed_post thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,412 | INFO     | [data] copytool_in thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,540 | INFO     | [data] copytool_out thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,676 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,695 | INFO     | [payload] control thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,730 | INFO     | [job] control thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:00,817 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:01,005 | INFO     | [job] validate thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:01,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 16:36:12] 2025-05-09 04:14:02,122 | INFO     | [job] queue monitor thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:02,535 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 16:36:12] 2025-05-09 04:14:03,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302295492416)>', '<ExcThread(monitor, started 140301842753280)>']
[2025-05-09 16:36:12] 2025-05-09 04:14:04,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 16:36:12] 2025-05-09 04:14:04,849 | INFO     | [monitor] control thread has ended
[2025-05-09 16:36:12] 2025-05-09 04:14:08,940 | INFO     | all workflow threads have been joined
[2025-05-09 16:36:12] 2025-05-09 04:14:08,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 16:36:12] 2025-05-09 04:14:08,941 | INFO     | traces error code: 0
[2025-05-09 16:36:12] 2025-05-09 04:14:08,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 16:36:12] 2025-05-09 04:14:09,239 [wrapper] ==== pilot stdout END ====
[2025-05-09 16:36:12] 2025-05-09 04:14:09,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 16:36:12] 2025-05-09 04:14:09,413 [wrapper] pilotpid: 10320
[2025-05-09 16:36:12] 2025-05-09 04:14:09,475 [wrapper] Pilot exit status: 0
[2025-05-09 16:36:12] 2025-05-09 04:14:10,059 [wrapper] pandaids: 6638230428
[2025-05-09 16:36:12] 2025-05-09 04:14:10,842 [wrapper] cleanup supervisor_pilot 10855 10321
[2025-05-09 16:36:12] 2025-05-09 04:14:10,979 [wrapper] Test setup, not cleaning
[2025-05-09 16:36:12] 2025-05-09 04:14:11,067 [wrapper] apfmon messages muted
[2025-05-09 16:36:12] 2025-05-09 04:14:11,167 [wrapper] ==== wrapper stdout END ====
[2025-05-09 16:36:12] 2025-05-09 04:14:11,266 [wrapper] ==== wrapper stderr END ====
[2025-05-09 16:36:12]  *** Error codes and diagnostics ***
[2025-05-09 16:36:12]     "exeErrorCode": 0,
[2025-05-09 16:36:12]     "exeErrorDiag": "",
[2025-05-09 16:36:12]     "pilotErrorCode": 0,
[2025-05-09 16:36:12]     "pilotErrorDiag": "",
[2025-05-09 16:36:12]  *** Listing of results directory ***
[2025-05-09 16:36:12] total 425264
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc    495897 May  8 11:46 pilot3.tar.gz
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc      5111 May  8 12:05 queuedata.json
[2025-05-09 16:36:12] -rwx------. 1 boinc boinc     37140 May  8 12:05 runpilot2-wrapper.sh
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc       100 May  9 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 16:36:12] -rwxr-xr-x. 1 boinc boinc      7986 May  9 02:30 run_atlas
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc       105 May  9 02:30 job.xml
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc      6370 May  9 02:30 init_data.xml
[2025-05-09 16:36:12] -rw-r--r--. 2 boinc boinc 225708546 May  9 02:30 EVNT.44506061._001915.pool.root.1
[2025-05-09 16:36:12] -rw-r--r--. 2 boinc boinc     17569 May  9 02:30 start_atlas.sh
[2025-05-09 16:36:12] drwxrwx--x. 2 boinc boinc        68 May  9 02:30 shared
[2025-05-09 16:36:12] -rw-r--r--. 2 boinc boinc    508884 May  9 02:30 input.tar.gz
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc         0 May  9 02:30 boinc_lockfile
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc      2558 May  9 02:30 pandaJob.out
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc       424 May  9 02:30 setup.sh.local
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc    997945 May  9 02:31 agis_schedconf.cvmfs.json
[2025-05-09 16:36:12] drwx------. 4 boinc boinc      4096 May  9 02:31 pilot3
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc 202859467 May  9 06:10 HITS.44506063._052427.pool.root.1
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc       530 May  9 06:10 boinc_task_state.xml
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc      1022 May  9 06:11 memory_monitor_summary.json
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc   1596741 May  9 06:11 agis_ddmendpoints.agis.ALL.json
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc    368270 May  9 06:12 log.44506063._052427.job.log.tgz.1
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc        95 May  9 06:13 pilot_heartbeat.json
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc      7692 May  9 06:13 heartbeat.json
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc      4994 May  9 06:14 pilotlog.txt
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc   1165727 May  9 06:14 log.44506063._052427.job.log.1
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc       357 May  9 06:14 output.list
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc       620 May  9 06:14 runtime_log
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc   1556480 May  9 06:14 result.tar.gz
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc     11013 May  9 06:14 runtime_log.err
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc       657 May  9 06:14 e1zLDmJJDX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmB28LDm3E9d6n.diag
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc      8192 May  9 16:36 boinc_mmap_file
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc        28 May  9 16:36 wrapper_checkpoint.txt
[2025-05-09 16:36:12] -rw-r--r--. 1 boinc boinc     20558 May  9 16:36 stderr.txt
[2025-05-09 16:36:12] HITS file was successfully produced:
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc 202859467 May  9 06:10 shared/HITS.pool.root.1
[2025-05-09 16:36:12]  *** Contents of shared directory: ***
[2025-05-09 16:36:12] total 420568
[2025-05-09 16:36:12] -rw-r--r--. 2 boinc boinc 225708546 May  9 02:30 ATLAS.root_0
[2025-05-09 16:36:12] -rw-r--r--. 2 boinc boinc     17569 May  9 02:30 start_atlas.sh
[2025-05-09 16:36:12] -rw-r--r--. 2 boinc boinc    508884 May  9 02:30 input.tar.gz
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc 202859467 May  9 06:10 HITS.pool.root.1
[2025-05-09 16:36:12] -rw-------. 1 boinc boinc   1556480 May  9 06:14 result.tar.gz
16:36:14 (6446): run_atlas exited; CPU time 56431.888465
16:36:14 (6446): called boinc_finish(0)

</stderr_txt>
]]>

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