Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:02:13 (620463): wrapper (7.7.26015): starting
01:02:13 (620463): wrapper: running run_atlas (--nthreads 3)
[2025-05-09 01:02:13] Arguments: --nthreads 3
[2025-05-09 01:02:13] Threads: 3
[2025-05-09 01:02:13] Checking for CVMFS
[2025-05-09 01:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 01:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 01:02:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 01:02:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 01:02:14] 2.9.2.0 3000 2243 78124 145773 1 56 3245614 36864001 0 130560 0 1608200 99.602 1397441 7216 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-09 01:02:14] CVMFS is ok
[2025-05-09 01:02:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-09 01:02:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-09 01:02:14] Further information can be found at the LHC@home message board.
[2025-05-09 01:02:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 01:02:14] Checking for apptainer binary...
[2025-05-09 01:02:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 01:02:14] Running /usr/bin/apptainer --version
[2025-05-09 01:02:14] apptainer version 1.3.6-6.1
[2025-05-09 01:02:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 01:02:14] pclinst
[2025-05-09 01:02:14] apptainer works
[2025-05-09 01:02:14] Set ATHENA_PROC_NUMBER=3
[2025-05-09 01:02:14] Set ATHENA_CORE_NUMBER=3
[2025-05-09 01:02:14] Starting ATLAS job with PandaID=6638230346
[2025-05-09 01:02:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 02:41:22]  *** The last 200 lines of the pilot log: ***
[2025-05-09 02:41:22]  filetype=log
[2025-05-09 02:41:22]  guid=fbfc77cb-e651-4aa5-a35e-11bc8a6d9cbd
[2025-05-09 02:41:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-09 02:41:22]  is_altstaged=None
[2025-05-09 02:41:22]  is_tar=False
[2025-05-09 02:41:22]  lfn=log.44506063._052345.job.log.tgz.1
[2025-05-09 02:41:22]  mtime=0
[2025-05-09 02:41:22]  protocol_id=None
[2025-05-09 02:41:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-09 02:41:22]  replicas=None
[2025-05-09 02:41:22]  scope=mc23_13p6TeV
[2025-05-09 02:41:22]  status=None
[2025-05-09 02:41:22]  status_code=0
[2025-05-09 02:41:22]  storage_token=
[2025-05-09 02:41:22]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6638230346/log.44506063._052345.job.log.tgz.1
[2025-05-09 02:41:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/68/log.44506063._052345.job.log.tgz.1
[2025-05-09 02:41:22]  workdir=None
[2025-05-09 02:41:22] ]
[2025-05-09 02:41:22] 2025-05-09 00:40:57,581 | INFO     | transferring file log.44506063._052345.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6638230346/log.44506063._052345.job.log.tgz.1 to /local/data/boinc/
[2025-05-09 02:41:22] 2025-05-09 00:40:57,581 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6638230346/log.44506063._052345.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0523
[2025-05-09 02:41:22] 2025-05-09 00:40:57,593 | INFO     | adding to output.list: log.44506063._052345.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/68/log.44506063._052345.job.log.tg
[2025-05-09 02:41:22] 2025-05-09 00:40:57,593 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-09 02:41:22] 2025-05-09 00:40:57,593 | INFO     | summary of transferred files:
[2025-05-09 02:41:22] 2025-05-09 00:40:57,593 | INFO     |  -- lfn=log.44506063._052345.job.log.tgz.1, status_code=0, status=transferred
[2025-05-09 02:41:22] 2025-05-09 00:40:57,593 | INFO     | stage-out finished correctly
[2025-05-09 02:41:22] 2025-05-09 00:40:58,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-09 02:41:22] 2025-05-09 00:40:59,406 | INFO     | monitor loop #455: job 0:6638230346 is in state 'finished'
[2025-05-09 02:41:22] 2025-05-09 00:40:59,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 02:41:22] 2025-05-09 00:41:01,182 | INFO     | job 6638230346 has state=finished
[2025-05-09 02:41:22] 2025-05-09 00:41:01,182 | INFO     | preparing for final server update for job 6638230346 in state='finished'
[2025-05-09 02:41:22] 2025-05-09 00:41:01,182 | INFO     | this job has now completed (state=finished)
[2025-05-09 02:41:22] 2025-05-09 00:41:01,183 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-09 02:41:22] 2025-05-09 00:41:01,183 | INFO     | log transfer has been attempted: DONE
[2025-05-09 02:41:22] 2025-05-09 00:41:01,183 | INFO     | job 6638230346 has finished - writing final server update
[2025-05-09 02:41:22] 2025-05-09 00:41:01,183 | INFO     | total number of processed events: 400 (read)
[2025-05-09 02:41:22] 2025-05-09 00:41:01,184 | INFO     | executing command: lscpu
[2025-05-09 02:41:22] 2025-05-09 00:41:01,200 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-09 02:41:22] 2025-05-09 00:41:01,909 | INFO     | monitor loop #456: job 0:6638230346 is in state 'finished'
[2025-05-09 02:41:22] 2025-05-09 00:41:01,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 02:41:22] 2025-05-09 00:41:03,416 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-09 02:41:22] 2025-05-09 00:41:03,416 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6638230346/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 02:41:22] 2025-05-09 00:41:03,417 | INFO     | extracted standard info from prmon json
[2025-05-09 02:41:22] 2025-05-09 00:41:03,417 | INFO     | extracted standard memory fields from prmon json
[2025-05-09 02:41:22] 2025-05-09 00:41:03,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-09 02:41:22] 2025-05-09 00:41:03,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 02:41:22] 2025-05-09 00:41:03,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | fitting pss+swap vs Time
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | sum of square deviations: 226022842.5
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | sum of deviations: 9646872389.000002
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | mean x: 1746748377.5
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | mean y: 2323104.711111111
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | -- intersect: -74550578305.84125
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | intersect: -74550578305.84125
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | chi2: 1.2301265744964622
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | -- intersect: -74550578305.84125
[2025-05-09 02:41:22] 2025-05-09 00:41:03,418 | INFO     | current memory leak: 42.68 B/s (using 90 data points, chi2=1.23)
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | ..............................
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . Timing measurements:
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . get job = 0 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . initial setup = 1 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . payload setup = 2 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . stage-in = 0 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . payload execution = 5899 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . stage-out = 0 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | . log creation = 0 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,419 | INFO     | ..............................
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | 
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | job summary report
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | --------------------------------------------------
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | PanDA job id: 6638230346
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | task id: 44506063
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | errors: (none)
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | pilot state: finished 
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | transexitcode: 0
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | exeerrorcode: 0
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | exeerrordiag: 
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | exitcode: 0
[2025-05-09 02:41:22] 2025-05-09 00:41:03,449 | INFO     | exitmsg: OK
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | cpuconsumptiontime: 15735 s
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | nevents: 400
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | neventsw: 0
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | pid: 630546
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | pgrp: 630546
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | corecount: 3
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | event service: False
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | sizes: {0: 2393691, 3: 2393897, 11: 2393925, 5905: 2429646, 5906: 2429646, 5911: 2429816}
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | --------------------------------------------------
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | 
[2025-05-09 02:41:22] 2025-05-09 00:41:03,450 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 02:41:22] 2025-05-09 00:41:03,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 02:41:22] 2025-05-09 00:41:03,462 | INFO     | job 6638230346 has completed (purged errors)
[2025-05-09 02:41:22] 2025-05-09 00:41:03,462 | INFO     | overall cleanup function is called
[2025-05-09 02:41:22] 2025-05-09 00:41:03,635 | INFO     | PID=624111 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-09 02:41:22] 2025-05-09 00:41:04,468 | INFO     | --- collectZombieJob: --- 10, [630546]
[2025-05-09 02:41:22] 2025-05-09 00:41:04,468 | INFO     | zombie collector waiting for pid 630546
[2025-05-09 02:41:22] 2025-05-09 00:41:04,468 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 02:41:22] 2025-05-09 00:41:04,468 | INFO     | collected zombie processes
[2025-05-09 02:41:22] 2025-05-09 00:41:04,469 | INFO     | will attempt to kill all subprocesses of pid=630546
[2025-05-09 02:41:22] 2025-05-09 00:41:04,509 | INFO     | process IDs to be killed: [630546] (in reverse order)
[2025-05-09 02:41:22] 2025-05-09 00:41:04,532 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 02:41:22] 2025-05-09 00:41:04,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 02:41:22] 2025-05-09 00:41:04,533 | INFO     | did not find any defunct processes belonging to 630546
[2025-05-09 02:41:22] 2025-05-09 00:41:04,534 | INFO     | did not find any defunct processes belonging to 630546
[2025-05-09 02:41:22] 2025-05-09 00:41:04,534 | INFO     | ready for new job
[2025-05-09 02:41:22] 2025-05-09 00:41:04,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 02:41:22] 2025-05-09 00:41:04,535 | INFO     | **************************************
[2025-05-09 02:41:22] 2025-05-09 00:41:04,535 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 02:41:22] 2025-05-09 00:41:04,535 | INFO     | **************************************
[2025-05-09 02:41:22] 2025-05-09 00:41:04,535 | INFO     | 
[2025-05-09 02:41:22] 2025-05-09 00:41:04,536 | INFO     | architecture information:
[2025-05-09 02:41:22] 2025-05-09 00:41:04,536 | INFO     | executing command: cat /etc/os-release
[2025-05-09 02:41:22] 2025-05-09 00:41:04,544 | INFO     | cat /etc/os-release:
[2025-05-09 02:41:22] NAME="CentOS Linux"
[2025-05-09 02:41:22] VERSION="7 (Core)"
[2025-05-09 02:41:22] ID="centos"
[2025-05-09 02:41:22] ID_LIKE="rhel fedora"
[2025-05-09 02:41:22] VERSION_ID="7"
[2025-05-09 02:41:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 02:41:22] ANSI_COLOR="0;31"
[2025-05-09 02:41:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 02:41:22] HOME_URL="https://www.centos.org/"
[2025-05-09 02:41:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 02:41:22] 
[2025-05-09 02:41:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 02:41:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 02:41:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 02:41:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 02:41:22] 
[2025-05-09 02:41:22] 2025-05-09 00:41:04,544 | INFO     | **************************************
[2025-05-09 02:41:22] 2025-05-09 00:41:05,047 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-09 02:41:22] 2025-05-09 00:41:05,060 | INFO     | sufficient remaining disk space (257346764800 B)
[2025-05-09 02:41:22] 2025-05-09 00:41:05,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 02:41:22] 2025-05-09 00:41:05,061 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 02:41:22] 2025-05-09 00:41:05,061 | INFO     | update_server=False
[2025-05-09 02:41:22] 2025-05-09 00:41:05,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 02:41:22] 2025-05-09 00:41:05,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 02:41:22] 2025-05-09 00:41:05,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 02:41:22] 2025-05-09 00:41:05,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 02:41:22] 2025-05-09 00:41:05,418 | INFO     | aborting loop
[2025-05-09 02:41:22] 2025-05-09 00:41:05,509 | INFO     | all job control threads have been joined
[2025-05-09 02:41:22] 2025-05-09 00:41:05,510 | INFO     | all data control threads have been joined
[2025-05-09 02:41:22] 2025-05-09 00:41:05,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 02:41:22] 2025-05-09 00:41:05,642 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 02:41:22] 2025-05-09 00:41:05,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 02:41:22] 2025-05-09 00:41:05,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 02:41:22] 2025-05-09 00:41:05,926 | INFO     | all payload control threads have been joined
[2025-05-09 02:41:22] 2025-05-09 00:41:06,066 | INFO     | [job] retrieve thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,067 | INFO     | [job] queue monitor thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,199 | INFO     | [data] copytool_in thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,324 | INFO     | [payload] validate_post thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,424 | INFO     | [job] job monitor thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,515 | INFO     | [job] control thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,515 | INFO     | [data] control thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,675 | INFO     | [payload] failed_post thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,805 | INFO     | [job] validate thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,814 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,870 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:06,931 | INFO     | [payload] control thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:07,298 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:07,638 | INFO     | [data] copytool_out thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:09,068 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:15,774 | INFO     | job.realtimelogging is not enabled
[2025-05-09 02:41:22] 2025-05-09 00:41:16,780 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 02:41:22] 2025-05-09 00:41:17,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483063625536)>', '<ExcThread(monitor, started 140482701141760)>']
[2025-05-09 02:41:22] 2025-05-09 00:41:18,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 02:41:22] 2025-05-09 00:41:18,709 | INFO     | [monitor] control thread has ended
[2025-05-09 02:41:22] 2025-05-09 00:41:22,803 | INFO     | all workflow threads have been joined
[2025-05-09 02:41:22] 2025-05-09 00:41:22,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 02:41:22] 2025-05-09 00:41:22,804 | INFO     | traces error code: 0
[2025-05-09 02:41:22] 2025-05-09 00:41:22,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 02:41:22] 2025-05-09 00:41:22,853 [wrapper] ==== pilot stdout END ====
[2025-05-09 02:41:22] 2025-05-09 00:41:22,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 02:41:22] 2025-05-09 00:41:22,858 [wrapper] pilotpid: 624111
[2025-05-09 02:41:22] 2025-05-09 00:41:22,860 [wrapper] Pilot exit status: 0
[2025-05-09 02:41:22] 2025-05-09 00:41:22,867 [wrapper] pandaids: 6638230346
[2025-05-09 02:41:22] 2025-05-09 00:41:22,882 [wrapper] cleanup supervisor_pilot  642603 624112
[2025-05-09 02:41:22] 2025-05-09 00:41:22,885 [wrapper] Test setup, not cleaning
[2025-05-09 02:41:22] 2025-05-09 00:41:22,887 [wrapper] apfmon messages muted
[2025-05-09 02:41:22] 2025-05-09 00:41:22,889 [wrapper] ==== wrapper stdout END ====
[2025-05-09 02:41:22] 2025-05-09 00:41:22,891 [wrapper] ==== wrapper stderr END ====
[2025-05-09 02:41:22]  *** Error codes and diagnostics ***
[2025-05-09 02:41:22]     "exeErrorCode": 0,
[2025-05-09 02:41:22]     "exeErrorDiag": "",
[2025-05-09 02:41:22]     "pilotErrorCode": 0,
[2025-05-09 02:41:22]     "pilotErrorDiag": "",
[2025-05-09 02:41:22]  *** Listing of results directory ***
[2025-05-09 02:41:22] total 416096
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc    495897 May  8 11:46 pilot3.tar.gz
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc      5111 May  8 11:51 queuedata.json
[2025-05-09 02:41:22] -rwx------ 1 boinc boinc     37140 May  8 11:53 runpilot2-wrapper.sh
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc       100 May  9 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 02:41:22] -rwxr-xr-x 1 boinc boinc      7986 May  9 01:02 run_atlas
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc       105 May  9 01:02 job.xml
[2025-05-09 02:41:22] -rw-r--r-- 2 boinc boinc 221294410 May  9 01:02 EVNT.44506061._001909.pool.root.1
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc      6917 May  9 01:02 init_data.xml
[2025-05-09 02:41:22] drwxrwx--x 2 boinc boinc      4096 May  9 01:02 shared
[2025-05-09 02:41:22] -rw-r--r-- 2 boinc boinc    508885 May  9 01:02 input.tar.gz
[2025-05-09 02:41:22] -rw-r--r-- 2 boinc boinc     17569 May  9 01:02 start_atlas.sh
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc         0 May  9 01:02 boinc_lockfile
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc      2557 May  9 01:02 pandaJob.out
[2025-05-09 02:41:22] -rw------- 1 boinc boinc       424 May  9 01:02 setup.sh.local
[2025-05-09 02:41:22] -rw------- 1 boinc boinc    997887 May  9 01:02 agis_schedconf.cvmfs.json
[2025-05-09 02:41:22] -rw------- 1 boinc boinc   1596741 May  9 01:02 agis_ddmendpoints.agis.ALL.json
[2025-05-09 02:41:22] drwx------ 4 boinc boinc      4096 May  9 01:02 pilot3
[2025-05-09 02:41:22] -rw------- 1 boinc boinc 199302248 May  9 02:40 HITS.44506063._052345.pool.root.1
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc       529 May  9 02:40 boinc_task_state.xml
[2025-05-09 02:41:22] -rw------- 1 boinc boinc        95 May  9 02:40 pilot_heartbeat.json
[2025-05-09 02:41:22] -rw------- 1 boinc boinc      1018 May  9 02:40 memory_monitor_summary.json
[2025-05-09 02:41:22] -rw------- 1 boinc boinc    250444 May  9 02:40 log.44506063._052345.job.log.tgz.1
[2025-05-09 02:41:22] -rw------- 1 boinc boinc      7657 May  9 02:41 heartbeat.json
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc      8192 May  9 02:41 boinc_mmap_file
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc        27 May  9 02:41 wrapper_checkpoint.txt
[2025-05-09 02:41:22] -rw------- 1 boinc boinc      4429 May  9 02:41 pilotlog.txt
[2025-05-09 02:41:22] -rw------- 1 boinc boinc    566752 May  9 02:41 log.44506063._052345.job.log.1
[2025-05-09 02:41:22] -rw------- 1 boinc boinc       357 May  9 02:41 output.list
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc       620 May  9 02:41 runtime_log
[2025-05-09 02:41:22] -rw------- 1 boinc boinc    839680 May  9 02:41 result.tar.gz
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc     11104 May  9 02:41 runtime_log.err
[2025-05-09 02:41:22] -rw------- 1 boinc boinc       660 May  9 02:41 eSDODm57CX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm708LDmEOzcNo.diag
[2025-05-09 02:41:22] -rw-r--r-- 1 boinc boinc     21238 May  9 02:41 stderr.txt
[2025-05-09 02:41:22] HITS file was successfully produced:
[2025-05-09 02:41:22] -rw------- 1 boinc boinc 199302248 May  9 02:40 shared/HITS.pool.root.1
[2025-05-09 02:41:22]  *** Contents of shared directory: ***
[2025-05-09 02:41:22] total 412088
[2025-05-09 02:41:22] -rw-r--r-- 2 boinc boinc 221294410 May  9 01:02 ATLAS.root_0
[2025-05-09 02:41:22] -rw-r--r-- 2 boinc boinc    508885 May  9 01:02 input.tar.gz
[2025-05-09 02:41:22] -rw-r--r-- 2 boinc boinc     17569 May  9 01:02 start_atlas.sh
[2025-05-09 02:41:22] -rw------- 1 boinc boinc 199302248 May  9 02:40 HITS.pool.root.1
[2025-05-09 02:41:22] -rw------- 1 boinc boinc    839680 May  9 02:41 result.tar.gz
02:41:24 (620463): run_atlas exited; CPU time 15756.098528
02:41:24 (620463): called boinc_finish(0)

</stderr_txt>
]]>

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