Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:50:51 (12141): wrapper (7.7.26015): starting
06:50:51 (12141): wrapper: running run_atlas (--nthreads 8)
[2025-05-09 06:50:52] Arguments: --nthreads 8
[2025-05-09 06:50:52] Threads: 8
[2025-05-09 06:50:52] Checking for CVMFS
[2025-05-09 06:50:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 06:50:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 06:50:53] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 06:50:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 06:50:54] 2.11.2.0 15068 5648 84268 145781 3 58 13975865 25165825 941 130560 0 2129986 99.818 1896992 3677 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-09 06:50:54] CVMFS is ok
[2025-05-09 06:50:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 06:50:54] Checking for apptainer binary...
[2025-05-09 06:50:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 06:50:54] Running /usr/bin/apptainer --version
[2025-05-09 06:50:55] apptainer version 1.3.2-1.el7
[2025-05-09 06:50:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 10:09:43] cg-vwn315.simple-grid.lan
[2025-05-09 10:09:43] apptainer works
[2025-05-09 10:09:43] Set ATHENA_PROC_NUMBER=8
[2025-05-09 10:09:43] Set ATHENA_CORE_NUMBER=8
[2025-05-09 10:09:43] Starting ATLAS job with PandaID=6638224391
[2025-05-09 10:09:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 14:55:38]  *** The last 200 lines of the pilot log: ***
[2025-05-09 14:55:38] 2025-05-09 12:44:19,499 | INFO     | mean y: 2425262.619402985
[2025-05-09 14:55:38] 2025-05-09 12:44:19,499 | INFO     | -- intersect: -29005326501.994797
[2025-05-09 14:55:38] 2025-05-09 12:44:19,499 | INFO     | intersect: -29005326501.994797
[2025-05-09 14:55:38] 2025-05-09 12:44:19,500 | INFO     | chi2: 6.286355984138301
[2025-05-09 14:55:38] 2025-05-09 12:44:19,500 | INFO     | sum of square deviations: 5640782972.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,503 | INFO     | sum of deviations: 133279604915.99998
[2025-05-09 14:55:38] 2025-05-09 12:44:19,503 | INFO     | mean x: 1746786240.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,503 | INFO     | mean y: 2440962.2927756654
[2025-05-09 14:55:38] 2025-05-09 12:44:19,503 | INFO     | -- intersect: -41270371889.317345
[2025-05-09 14:55:38] 2025-05-09 12:44:19,503 | INFO     | intersect: -41270371889.317345
[2025-05-09 14:55:38] 2025-05-09 12:44:19,504 | INFO     | chi2: 4.686621164031833
[2025-05-09 14:55:38] 2025-05-09 12:44:19,504 | INFO     | current chi2=4.686621164031833 (change=25.447728765964094 %)
[2025-05-09 14:55:38] 2025-05-09 12:44:19,504 | INFO     | sum of square deviations: 5325139844.5
[2025-05-09 14:55:38] 2025-05-09 12:44:19,512 | INFO     | sum of deviations: 130664240347.00002
[2025-05-09 14:55:38] 2025-05-09 12:44:19,512 | INFO     | mean x: 1746786087.5
[2025-05-09 14:55:38] 2025-05-09 12:44:19,513 | INFO     | mean y: 2439698.5581395347
[2025-05-09 14:55:38] 2025-05-09 12:44:19,513 | INFO     | -- intersect: -42858871710.4996
[2025-05-09 14:55:38] 2025-05-09 12:44:19,513 | INFO     | intersect: -42858871710.4996
[2025-05-09 14:55:38] 2025-05-09 12:44:19,513 | INFO     | chi2: 4.687604318109905
[2025-05-09 14:55:38] 2025-05-09 12:44:19,513 | INFO     | current chi2=4.687604318109905 (change=-0.020977886704758093 %)
[2025-05-09 14:55:38] 2025-05-09 12:44:19,513 | INFO     | right removable region: 257
[2025-05-09 14:55:38] 2025-05-09 12:44:19,514 | INFO     | sum of square deviations: 5640782972.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,516 | INFO     | sum of deviations: 32519015393.000042
[2025-05-09 14:55:38] 2025-05-09 12:44:19,517 | INFO     | mean x: 1746786545.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,517 | INFO     | mean y: 2456159.3041825094
[2025-05-09 14:55:38] 2025-05-09 12:44:19,517 | INFO     | -- intersect: -10067737788.434242
[2025-05-09 14:55:38] 2025-05-09 12:44:19,517 | INFO     | intersect: -10067737788.434242
[2025-05-09 14:55:38] 2025-05-09 12:44:19,518 | INFO     | chi2: 3.7217294329646546
[2025-05-09 14:55:38] 2025-05-09 12:44:19,518 | INFO     | current chi2=3.7217294329646546 (change=40.79671208001421 %)
[2025-05-09 14:55:38] 2025-05-09 12:44:19,518 | INFO     | sum of square deviations: 5325139844.5
[2025-05-09 14:55:38] 2025-05-09 12:44:19,521 | INFO     | sum of deviations: -19637379677.000004
[2025-05-09 14:55:38] 2025-05-09 12:44:19,521 | INFO     | mean x: 1746786697.5
[2025-05-09 14:55:38] 2025-05-09 12:44:19,521 | INFO     | mean y: 2481384.1317829457
[2025-05-09 14:55:38] 2025-05-09 12:44:19,521 | INFO     | -- intersect: 6444061247.798489
[2025-05-09 14:55:38] 2025-05-09 12:44:19,521 | INFO     | intersect: 6444061247.798489
[2025-05-09 14:55:38] 2025-05-09 12:44:19,522 | INFO     | chi2: 2.2623898281524872
[2025-05-09 14:55:38] 2025-05-09 12:44:19,522 | INFO     | current chi2=2.2623898281524872 (change=39.21132986955709 %)
[2025-05-09 14:55:38] 2025-05-09 12:44:19,523 | INFO     | sum of square deviations: 5021496942.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,532 | INFO     | sum of deviations: -46163148059.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,532 | INFO     | mean x: 1746786850.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,532 | INFO     | mean y: 2494620.7391304346
[2025-05-09 14:55:38] 2025-05-09 12:44:19,533 | INFO     | -- intersect: 16060889341.566628
[2025-05-09 14:55:38] 2025-05-09 12:44:19,533 | INFO     | intersect: 16060889341.566628
[2025-05-09 14:55:38] 2025-05-09 12:44:19,533 | INFO     | chi2: 1.7272282052779366
[2025-05-09 14:55:38] 2025-05-09 12:44:19,533 | INFO     | current chi2=1.7272282052779366 (change=23.65470425190049 %)
[2025-05-09 14:55:38] 2025-05-09 12:44:19,533 | INFO     | left removable region: 30
[2025-05-09 14:55:38] 2025-05-09 12:44:19,534 | INFO     | sum of square deviations: 3627000098.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,536 | INFO     | sum of deviations: -13765691453.000002
[2025-05-09 14:55:38] 2025-05-09 12:44:19,536 | INFO     | mean x: 1746786972.0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,536 | INFO     | mean y: 2514349.013215859
[2025-05-09 14:55:38] 2025-05-09 12:44:19,536 | INFO     | -- intersect: 6632161396.426159
[2025-05-09 14:55:38] 2025-05-09 12:44:19,537 | INFO     | intersect: 6632161396.426159
[2025-05-09 14:55:38] 2025-05-09 12:44:19,537 | INFO     | chi2: 0.019416781599789493
[2025-05-09 14:55:38] 2025-05-09 12:44:19,537 | INFO     | -- intersect: 6632161396.426159
[2025-05-09 14:55:38] 2025-05-09 12:44:19,537 | INFO     | current memory leak: -3.80 B/s (using 227 data points, chi2=0.02)
[2025-05-09 14:55:38] 2025-05-09 12:44:19,538 | INFO     | ..............................
[2025-05-09 14:55:38] 2025-05-09 12:44:19,538 | INFO     | . Timing measurements:
[2025-05-09 14:55:38] 2025-05-09 12:44:19,538 | INFO     | . get job = 0 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,539 | INFO     | . initial setup = 2 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,539 | INFO     | . payload setup = 9 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,539 | INFO     | . stage-in = 0 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,539 | INFO     | . payload execution = 16314 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,539 | INFO     | . stage-out = 3 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,539 | INFO     | . log creation = 1 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,539 | INFO     | ..............................
[2025-05-09 14:55:38] 2025-05-09 12:44:19,722 | INFO     | 
[2025-05-09 14:55:38] 2025-05-09 12:44:19,722 | INFO     | job summary report
[2025-05-09 14:55:38] 2025-05-09 12:44:19,722 | INFO     | --------------------------------------------------
[2025-05-09 14:55:38] 2025-05-09 12:44:19,722 | INFO     | PanDA job id: 6638224391
[2025-05-09 14:55:38] 2025-05-09 12:44:19,723 | INFO     | task id: 44506063
[2025-05-09 14:55:38] 2025-05-09 12:44:19,723 | INFO     | errors: (none)
[2025-05-09 14:55:38] 2025-05-09 12:44:19,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 14:55:38] 2025-05-09 12:44:19,723 | INFO     | pilot state: finished 
[2025-05-09 14:55:38] 2025-05-09 12:44:19,723 | INFO     | transexitcode: 0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,723 | INFO     | exeerrorcode: 0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,723 | INFO     | exeerrordiag: 
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | exitcode: 0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | exitmsg: OK
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | cpuconsumptiontime: 59051 s
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | nevents: 400
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | neventsw: 0
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | pid: 5670
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | pgrp: 5670
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | corecount: 8
[2025-05-09 14:55:38] 2025-05-09 12:44:19,724 | INFO     | event service: False
[2025-05-09 14:55:38] 2025-05-09 12:44:19,725 | INFO     | sizes: {0: 2393568, 1: 2393767, 2: 2393767, 9: 2394001, 12: 2394029, 16328: 2424853, 16332: 2433852, 16441: 2433966}
[2025-05-09 14:55:38] 2025-05-09 12:44:19,725 | INFO     | --------------------------------------------------
[2025-05-09 14:55:38] 2025-05-09 12:44:19,725 | INFO     | 
[2025-05-09 14:55:38] 2025-05-09 12:44:19,725 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-05-09 14:55:38] 2025-05-09 12:44:20,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 14:55:38] 2025-05-09 12:44:20,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 14:55:38] 2025-05-09 12:44:20,331 | INFO     | job 6638224391 has completed (purged errors)
[2025-05-09 14:55:38] 2025-05-09 12:44:20,331 | INFO     | overall cleanup function is called
[2025-05-09 14:55:38] 2025-05-09 12:44:21,340 | INFO     | --- collectZombieJob: --- 10, [5670]
[2025-05-09 14:55:38] 2025-05-09 12:44:21,340 | INFO     | zombie collector waiting for pid 5670
[2025-05-09 14:55:38] 2025-05-09 12:44:21,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 14:55:38] 2025-05-09 12:44:21,341 | INFO     | collected zombie processes
[2025-05-09 14:55:38] 2025-05-09 12:44:21,341 | INFO     | will attempt to kill all subprocesses of pid=5670
[2025-05-09 14:55:38] 2025-05-09 12:44:21,451 | INFO     | process IDs to be killed: [5670] (in reverse order)
[2025-05-09 14:55:38] 2025-05-09 12:44:22,165 | INFO     | PID=31639 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-09 14:55:38] 2025-05-09 12:44:22,165 | INFO     | .. there are 2 such processes running
[2025-05-09 14:55:38] 2025-05-09 12:44:22,488 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 14:55:38] 2025-05-09 12:44:22,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 14:55:38] 2025-05-09 12:44:22,490 | INFO     | did not find any defunct processes belonging to 5670
[2025-05-09 14:55:38] 2025-05-09 12:44:22,492 | INFO     | did not find any defunct processes belonging to 5670
[2025-05-09 14:55:38] 2025-05-09 12:44:22,492 | INFO     | ready for new job
[2025-05-09 14:55:38] 2025-05-09 12:44:22,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 14:55:38] 2025-05-09 12:44:22,494 | INFO     | **************************************
[2025-05-09 14:55:38] 2025-05-09 12:44:22,494 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 14:55:38] 2025-05-09 12:44:22,494 | INFO     | **************************************
[2025-05-09 14:55:38] 2025-05-09 12:44:22,494 | INFO     | 
[2025-05-09 14:55:38] 2025-05-09 12:44:22,495 | INFO     | pilot is running in a VM
[2025-05-09 14:55:38] 2025-05-09 12:44:22,495 | INFO     | architecture information:
[2025-05-09 14:55:38] 2025-05-09 12:44:22,510 | INFO     | executing command: cat /etc/os-release
[2025-05-09 14:55:38] 2025-05-09 12:44:22,850 | INFO     | cat /etc/os-release:
[2025-05-09 14:55:38] NAME="CentOS Linux"
[2025-05-09 14:55:38] VERSION="7 (Core)"
[2025-05-09 14:55:38] ID="centos"
[2025-05-09 14:55:38] ID_LIKE="rhel fedora"
[2025-05-09 14:55:38] VERSION_ID="7"
[2025-05-09 14:55:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 14:55:38] ANSI_COLOR="0;31"
[2025-05-09 14:55:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 14:55:38] HOME_URL="https://www.centos.org/"
[2025-05-09 14:55:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 14:55:38] 
[2025-05-09 14:55:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 14:55:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 14:55:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 14:55:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 14:55:38] 
[2025-05-09 14:55:38] 2025-05-09 12:44:22,851 | INFO     | **************************************
[2025-05-09 14:55:38] 2025-05-09 12:44:23,354 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-05-09 14:55:38] 2025-05-09 12:44:23,660 | INFO     | sufficient remaining disk space (494765342720 B)
[2025-05-09 14:55:38] 2025-05-09 12:44:23,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 14:55:38] 2025-05-09 12:44:23,660 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 14:55:38] 2025-05-09 12:44:23,660 | INFO     | update_server=False
[2025-05-09 14:55:38] 2025-05-09 12:44:23,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 14:55:38] 2025-05-09 12:44:23,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 14:55:38] 2025-05-09 12:44:23,661 | INFO     | aborting loop
[2025-05-09 14:55:38] 2025-05-09 12:44:24,172 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 14:55:38] 2025-05-09 12:44:24,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 14:55:38] 2025-05-09 12:44:24,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 14:55:38] 2025-05-09 12:44:24,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 14:55:38] 2025-05-09 12:44:24,307 | INFO     | all data control threads have been joined
[2025-05-09 14:55:38] 2025-05-09 12:44:24,317 | INFO     | all job control threads have been joined
[2025-05-09 14:55:38] 2025-05-09 12:44:24,666 | INFO     | [job] retrieve thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:24,667 | INFO     | [job] job monitor thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:24,676 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:24,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 14:55:38] 2025-05-09 12:44:24,876 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,155 | INFO     | all payload control threads have been joined
[2025-05-09 14:55:38] 2025-05-09 12:44:25,188 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,313 | INFO     | [data] control thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,323 | INFO     | [job] control thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,388 | INFO     | [payload] validate_post thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 14:55:38] 2025-05-09 12:44:25,686 | INFO     | [data] copytool_in thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,753 | INFO     | [job] queue monitor thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,769 | INFO     | [payload] failed_post thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:25,995 | INFO     | [job] validate thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:26,161 | INFO     | [payload] control thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:26,291 | INFO     | [data] copytool_out thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:29,407 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 14:55:38] 2025-05-09 12:44:31,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875123869504)>', '<ExcThread(monitor, started 139874325751552)>']
[2025-05-09 14:55:38] 2025-05-09 12:44:32,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 14:55:38] 2025-05-09 12:44:32,219 | INFO     | [monitor] control thread has ended
[2025-05-09 14:55:38] 2025-05-09 12:44:36,516 | INFO     | all workflow threads have been joined
[2025-05-09 14:55:38] 2025-05-09 12:44:36,516 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 14:55:38] 2025-05-09 12:44:36,516 | INFO     | traces error code: 0
[2025-05-09 14:55:38] 2025-05-09 12:44:36,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 14:55:38] 2025-05-09 12:44:36,804 [wrapper] ==== pilot stdout END ====
[2025-05-09 14:55:38] 2025-05-09 12:44:36,893 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 14:55:38] 2025-05-09 12:44:36,974 [wrapper] pilotpid: 31639
[2025-05-09 14:55:38] 2025-05-09 12:44:37,061 [wrapper] Pilot exit status: 0
[2025-05-09 14:55:38] 2025-05-09 12:44:37,600 [wrapper] pandaids: 6638224391
[2025-05-09 14:55:38] 2025-05-09 12:44:38,468 [wrapper] cleanup supervisor_pilot  6026 31640
[2025-05-09 14:55:38] 2025-05-09 12:44:38,492 [wrapper] Test setup, not cleaning
[2025-05-09 14:55:38] 2025-05-09 12:44:38,653 [wrapper] apfmon messages muted
[2025-05-09 14:55:38] 2025-05-09 12:44:38,782 [wrapper] ==== wrapper stdout END ====
[2025-05-09 14:55:38] 2025-05-09 12:44:38,923 [wrapper] ==== wrapper stderr END ====
[2025-05-09 14:55:38]  *** Error codes and diagnostics ***
[2025-05-09 14:55:38]     "exeErrorCode": 0,
[2025-05-09 14:55:38]     "exeErrorDiag": "",
[2025-05-09 14:55:38]     "pilotErrorCode": 0,
[2025-05-09 14:55:38]     "pilotErrorDiag": "",
[2025-05-09 14:55:38]  *** Listing of results directory ***
[2025-05-09 14:55:38] total 417544
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc      5111 May  8 11:02 queuedata.json
[2025-05-09 14:55:38] -rwx------. 1 boinc boinc     37140 May  8 11:03 runpilot2-wrapper.sh
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc    495897 May  8 11:03 pilot3.tar.gz
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc       100 May  9 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 14:55:38] -rwxr-xr-x. 1 boinc boinc      7986 May  9 06:50 run_atlas
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc       105 May  9 06:50 job.xml
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc      6369 May  9 06:50 init_data.xml
[2025-05-09 14:55:38] -rw-r--r--. 2 boinc boinc 223464844 May  9 06:50 EVNT.44506061._001846.pool.root.1
[2025-05-09 14:55:38] -rw-r--r--. 2 boinc boinc     17569 May  9 06:50 start_atlas.sh
[2025-05-09 14:55:38] drwxrwx--x. 2 boinc boinc        68 May  9 06:50 shared
[2025-05-09 14:55:38] -rw-r--r--. 2 boinc boinc    508877 May  9 06:50 input.tar.gz
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc         0 May  9 06:50 boinc_lockfile
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc      2557 May  9 10:09 pandaJob.out
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc       424 May  9 10:09 setup.sh.local
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc    997945 May  9 10:09 agis_schedconf.cvmfs.json
[2025-05-09 14:55:38] drwx------. 4 boinc boinc      4096 May  9 10:10 pilot3
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc 196580480 May  9 14:41 HITS.44506063._051722.pool.root.1
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc       531 May  9 14:41 boinc_task_state.xml
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc      1020 May  9 14:42 memory_monitor_summary.json
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc   1596741 May  9 14:42 agis_ddmendpoints.agis.ALL.json
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc    422258 May  9 14:42 log.44506063._051722.job.log.tgz.1
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc        95 May  9 14:43 pilot_heartbeat.json
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc      7704 May  9 14:44 heartbeat.json
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc      4417 May  9 14:44 pilotlog.txt
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc   1423748 May  9 14:44 log.44506063._051722.job.log.1
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc       357 May  9 14:44 output.list
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc       620 May  9 14:44 runtime_log
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc   1863680 May  9 14:44 result.tar.gz
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc       657 May  9 14:44 XpjNDmELCX7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmtaJLDmihi38m.diag
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc     11031 May  9 14:44 runtime_log.err
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc      8192 May  9 14:55 boinc_mmap_file
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc        28 May  9 14:55 wrapper_checkpoint.txt
[2025-05-09 14:55:38] -rw-r--r--. 1 boinc boinc     20275 May  9 14:55 stderr.txt
[2025-05-09 14:55:38] HITS file was successfully produced:
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc 196580480 May  9 14:41 shared/HITS.pool.root.1
[2025-05-09 14:55:38]  *** Contents of shared directory: ***
[2025-05-09 14:55:38] total 412544
[2025-05-09 14:55:38] -rw-r--r--. 2 boinc boinc 223464844 May  9 06:50 ATLAS.root_0
[2025-05-09 14:55:38] -rw-r--r--. 2 boinc boinc     17569 May  9 06:50 start_atlas.sh
[2025-05-09 14:55:38] -rw-r--r--. 2 boinc boinc    508877 May  9 06:50 input.tar.gz
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc 196580480 May  9 14:41 HITS.pool.root.1
[2025-05-09 14:55:38] -rw-------. 1 boinc boinc   1863680 May  9 14:44 result.tar.gz
14:55:40 (12141): run_atlas exited; CPU time 59191.308827
14:55:40 (12141): called boinc_finish(0)

</stderr_txt>
]]>

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