Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:44:56 (29943): wrapper (7.7.26015): starting
06:44:56 (29943): wrapper: running run_atlas (--nthreads 10)
[2025-05-08 06:44:56] Arguments: --nthreads 10
[2025-05-08 06:44:56] Threads: 10
[2025-05-08 06:44:56] Checking for CVMFS
[2025-05-08 06:44:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 06:44:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 06:44:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 06:44:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 06:44:57] 2.11.2.0 9271 69642 382536 145747 2 356 11627177 18432000 12032 130560 0 237284517 99.014 557387509 35492 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-08 06:44:57] CVMFS is ok
[2025-05-08 06:44:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 06:44:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 06:44:57] Further information can be found at the LHC@home message board.
[2025-05-08 06:44:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 06:44:57] Checking for apptainer binary...
[2025-05-08 06:44:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 06:44:57] Running /usr/bin/apptainer --version
[2025-05-08 06:44:57] apptainer version 1.3.2-1.el7
[2025-05-08 06:44:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 06:45:03] c-211-18.aglt2.org
[2025-05-08 06:45:03] apptainer works
[2025-05-08 06:45:03] Set ATHENA_PROC_NUMBER=10
[2025-05-08 06:45:03] Set ATHENA_CORE_NUMBER=10
[2025-05-08 06:45:03] Starting ATLAS job with PandaID=6638221579
[2025-05-08 06:45:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 16:21:17]  *** The last 200 lines of the pilot log: ***
[2025-05-08 16:21:17] 2025-05-08 20:21:03,268 | INFO     | -- intersect: -2356703700.157665
[2025-05-08 16:21:17] 2025-05-08 20:21:03,268 | INFO     | intersect: -2356703700.157665
[2025-05-08 16:21:17] 2025-05-08 20:21:03,269 | INFO     | chi2: 0.003027396922642068
[2025-05-08 16:21:17] 2025-05-08 20:21:03,269 | INFO     | current chi2=0.003027396922642068 (change=31.052177876551767 %)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,270 | INFO     | sum of square deviations: 40890897256.77791
[2025-05-08 16:21:17] 2025-05-08 20:21:03,278 | INFO     | sum of deviations: 52379330481.91161
[2025-05-08 16:21:17] 2025-05-08 20:21:03,278 | INFO     | mean x: 1746720093.5304518
[2025-05-08 16:21:17] 2025-05-08 20:21:03,278 | INFO     | mean y: 2573649.166994106
[2025-05-08 16:21:17] 2025-05-08 20:21:03,278 | INFO     | -- intersect: -2234893248.7564
[2025-05-08 16:21:17] 2025-05-08 20:21:03,279 | INFO     | intersect: -2234893248.7564
[2025-05-08 16:21:17] 2025-05-08 20:21:03,279 | INFO     | chi2: 0.0019703827851810874
[2025-05-08 16:21:17] 2025-05-08 20:21:03,280 | INFO     | current chi2=0.0019703827851810874 (change=34.91495051592059 %)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,280 | INFO     | sum of square deviations: 39697658016.553444
[2025-05-08 16:21:17] 2025-05-08 20:21:03,288 | INFO     | sum of deviations: 48554914683.04765
[2025-05-08 16:21:17] 2025-05-08 20:21:03,289 | INFO     | mean x: 1746720246.0297618
[2025-05-08 16:21:17] 2025-05-08 20:21:03,289 | INFO     | mean y: 2574137.73015873
[2025-05-08 16:21:17] 2025-05-08 20:21:03,289 | INFO     | -- intersect: -2133870598.7770066
[2025-05-08 16:21:17] 2025-05-08 20:21:03,289 | INFO     | intersect: -2133870598.7770066
[2025-05-08 16:21:17] 2025-05-08 20:21:03,290 | INFO     | chi2: 0.0012607854223053206
[2025-05-08 16:21:17] 2025-05-08 20:21:03,290 | INFO     | current chi2=0.0012607854223053206 (change=36.01317308558151 %)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,291 | INFO     | sum of square deviations: 38527830210.26857
[2025-05-08 16:21:17] 2025-05-08 20:21:03,298 | INFO     | sum of deviations: 45558418513.56715
[2025-05-08 16:21:17] 2025-05-08 20:21:03,298 | INFO     | mean x: 1746720398.5310621
[2025-05-08 16:21:17] 2025-05-08 20:21:03,299 | INFO     | mean y: 2574528.382765531
[2025-05-08 16:21:17] 2025-05-08 20:21:03,299 | INFO     | -- intersect: -2062888761.612049
[2025-05-08 16:21:17] 2025-05-08 20:21:03,299 | INFO     | intersect: -2062888761.612049
[2025-05-08 16:21:17] 2025-05-08 20:21:03,300 | INFO     | chi2: 0.0009290755027027709
[2025-05-08 16:21:17] 2025-05-08 20:21:03,300 | INFO     | current chi2=0.0009290755027027709 (change=26.309783864412456 %)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,301 | INFO     | sum of square deviations: 37381181702.414894
[2025-05-08 16:21:17] 2025-05-08 20:21:03,308 | INFO     | sum of deviations: 42795173270.78746
[2025-05-08 16:21:17] 2025-05-08 20:21:03,309 | INFO     | mean x: 1746720551.0344129
[2025-05-08 16:21:17] 2025-05-08 20:21:03,309 | INFO     | mean y: 2574895.8360323887
[2025-05-08 16:21:17] 2025-05-08 20:21:03,309 | INFO     | -- intersect: -1997126698.1971488
[2025-05-08 16:21:17] 2025-05-08 20:21:03,309 | INFO     | intersect: -1997126698.1971488
[2025-05-08 16:21:17] 2025-05-08 20:21:03,310 | INFO     | chi2: 0.0006563932788894808
[2025-05-08 16:21:17] 2025-05-08 20:21:03,310 | INFO     | current chi2=0.0006563932788894808 (change=29.349845412997226 %)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,311 | INFO     | sum of square deviations: 36257480113.47222
[2025-05-08 16:21:17] 2025-05-08 20:21:03,318 | INFO     | sum of deviations: 40753648351.30063
[2025-05-08 16:21:17] 2025-05-08 20:21:03,318 | INFO     | mean x: 1746720703.5398774
[2025-05-08 16:21:17] 2025-05-08 20:21:03,318 | INFO     | mean y: 2575172.6768916156
[2025-05-08 16:21:17] 2025-05-08 20:21:03,319 | INFO     | -- intersect: -1960750494.1156619
[2025-05-08 16:21:17] 2025-05-08 20:21:03,319 | INFO     | intersect: -1960750494.1156619
[2025-05-08 16:21:17] 2025-05-08 20:21:03,320 | INFO     | chi2: 0.0005630091797402079
[2025-05-08 16:21:17] 2025-05-08 20:21:03,320 | INFO     | current chi2=0.0005630091797402079 (change=14.226851820796332 %)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,320 | INFO     | left removable region: 150
[2025-05-08 16:21:17] 2025-05-08 20:21:03,321 | INFO     | sum of square deviations: 21059626371.372616
[2025-05-08 16:21:17] 2025-05-08 20:21:03,325 | INFO     | sum of deviations: 20971013862.862747
[2025-05-08 16:21:17] 2025-05-08 20:21:03,326 | INFO     | mean x: 1746722808.0392158
[2025-05-08 16:21:17] 2025-05-08 20:21:03,326 | INFO     | mean y: 2578108.3210784313
[2025-05-08 16:21:17] 2025-05-08 20:21:03,326 | INFO     | -- intersect: -1736795020.907968
[2025-05-08 16:21:17] 2025-05-08 20:21:03,326 | INFO     | intersect: -1736795020.907968
[2025-05-08 16:21:17] 2025-05-08 20:21:03,327 | INFO     | chi2: 0.0003471414046808736
[2025-05-08 16:21:17] 2025-05-08 20:21:03,327 | INFO     | -- intersect: -1736795020.907968
[2025-05-08 16:21:17] 2025-05-08 20:21:03,327 | INFO     | current memory leak: 1.00 B/s (using 408 data points, chi2=0.00)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,328 | INFO     | ..............................
[2025-05-08 16:21:17] 2025-05-08 20:21:03,329 | INFO     | . Timing measurements:
[2025-05-08 16:21:17] 2025-05-08 20:21:03,329 | INFO     | . get job = 0 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,329 | INFO     | . initial setup = 3 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,329 | INFO     | . payload setup = 29 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,329 | INFO     | . stage-in = 0 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,329 | INFO     | . payload execution = 34441 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,329 | INFO     | . stage-out = 2 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,330 | INFO     | . log creation = 0 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,330 | INFO     | ..............................
[2025-05-08 16:21:17] 2025-05-08 20:21:03,694 | INFO     | 
[2025-05-08 16:21:17] 2025-05-08 20:21:03,694 | INFO     | job summary report
[2025-05-08 16:21:17] 2025-05-08 20:21:03,694 | INFO     | --------------------------------------------------
[2025-05-08 16:21:17] 2025-05-08 20:21:03,695 | INFO     | PanDA job id: 6638221579
[2025-05-08 16:21:17] 2025-05-08 20:21:03,695 | INFO     | task id: 44506063
[2025-05-08 16:21:17] 2025-05-08 20:21:03,695 | INFO     | errors: (none)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 16:21:17] 2025-05-08 20:21:03,695 | INFO     | pilot state: finished 
[2025-05-08 16:21:17] 2025-05-08 20:21:03,695 | INFO     | transexitcode: 0
[2025-05-08 16:21:17] 2025-05-08 20:21:03,696 | INFO     | exeerrorcode: 0
[2025-05-08 16:21:17] 2025-05-08 20:21:03,696 | INFO     | exeerrordiag: 
[2025-05-08 16:21:17] 2025-05-08 20:21:03,696 | INFO     | exitcode: 0
[2025-05-08 16:21:17] 2025-05-08 20:21:03,696 | INFO     | exitmsg: OK
[2025-05-08 16:21:17] 2025-05-08 20:21:03,696 | INFO     | cpuconsumptiontime: 96310 s
[2025-05-08 16:21:17] 2025-05-08 20:21:03,696 | INFO     | nevents: 400
[2025-05-08 16:21:17] 2025-05-08 20:21:03,697 | INFO     | neventsw: 0
[2025-05-08 16:21:17] 2025-05-08 20:21:03,697 | INFO     | pid: 11101
[2025-05-08 16:21:17] 2025-05-08 20:21:03,697 | INFO     | pgrp: 11101
[2025-05-08 16:21:17] 2025-05-08 20:21:03,697 | INFO     | corecount: 10
[2025-05-08 16:21:17] 2025-05-08 20:21:03,697 | INFO     | event service: False
[2025-05-08 16:21:17] 2025-05-08 20:21:03,697 | INFO     | sizes: {0: 2393512, 1: 2393767, 2: 2393795, 13: 2393795, 21: 2394057, 24: 2394085, 34474: 2433135, 34478: 2442076, 34480: 2442132, 34487: 2442302}
[2025-05-08 16:21:17] 2025-05-08 20:21:03,698 | INFO     | --------------------------------------------------
[2025-05-08 16:21:17] 2025-05-08 20:21:03,698 | INFO     | 
[2025-05-08 16:21:17] 2025-05-08 20:21:03,698 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-08 16:21:17] 2025-05-08 20:21:03,721 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 16:21:17] 2025-05-08 20:21:03,725 | INFO     | job 6638221579 has completed (purged errors)
[2025-05-08 16:21:17] 2025-05-08 20:21:03,725 | INFO     | overall cleanup function is called
[2025-05-08 16:21:17] 2025-05-08 20:21:04,735 | INFO     | --- collectZombieJob: --- 10, [11101]
[2025-05-08 16:21:17] 2025-05-08 20:21:04,735 | INFO     | zombie collector waiting for pid 11101
[2025-05-08 16:21:17] 2025-05-08 20:21:04,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 16:21:17] 2025-05-08 20:21:04,736 | INFO     | collected zombie processes
[2025-05-08 16:21:17] 2025-05-08 20:21:04,736 | INFO     | will attempt to kill all subprocesses of pid=11101
[2025-05-08 16:21:17] 2025-05-08 20:21:05,191 | INFO     | process IDs to be killed: [11101] (in reverse order)
[2025-05-08 16:21:17] 2025-05-08 20:21:05,350 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 16:21:17] 2025-05-08 20:21:05,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 16:21:17] 2025-05-08 20:21:05,368 | INFO     | did not find any defunct processes belonging to 11101
[2025-05-08 16:21:17] 2025-05-08 20:21:05,386 | INFO     | did not find any defunct processes belonging to 11101
[2025-05-08 16:21:17] 2025-05-08 20:21:05,386 | INFO     | ready for new job
[2025-05-08 16:21:17] 2025-05-08 20:21:05,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 16:21:17] 2025-05-08 20:21:05,390 | INFO     | **************************************
[2025-05-08 16:21:17] 2025-05-08 20:21:05,390 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 16:21:17] 2025-05-08 20:21:05,390 | INFO     | **************************************
[2025-05-08 16:21:17] 2025-05-08 20:21:05,390 | INFO     | 
[2025-05-08 16:21:17] 2025-05-08 20:21:05,393 | INFO     | architecture information:
[2025-05-08 16:21:17] 2025-05-08 20:21:05,393 | INFO     | executing command: cat /etc/os-release
[2025-05-08 16:21:17] 2025-05-08 20:21:05,408 | INFO     | cat /etc/os-release:
[2025-05-08 16:21:17] NAME="CentOS Linux"
[2025-05-08 16:21:17] VERSION="7 (Core)"
[2025-05-08 16:21:17] ID="centos"
[2025-05-08 16:21:17] ID_LIKE="rhel fedora"
[2025-05-08 16:21:17] VERSION_ID="7"
[2025-05-08 16:21:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 16:21:17] ANSI_COLOR="0;31"
[2025-05-08 16:21:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 16:21:17] HOME_URL="https://www.centos.org/"
[2025-05-08 16:21:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 16:21:17] 
[2025-05-08 16:21:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 16:21:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 16:21:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 16:21:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 16:21:17] 
[2025-05-08 16:21:17] 2025-05-08 20:21:05,409 | INFO     | **************************************
[2025-05-08 16:21:17] 2025-05-08 20:21:05,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-08 16:21:17] 2025-05-08 20:21:05,933 | INFO     | sufficient remaining disk space (56947113984 B)
[2025-05-08 16:21:17] 2025-05-08 20:21:05,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 16:21:17] 2025-05-08 20:21:05,934 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 16:21:17] 2025-05-08 20:21:05,934 | INFO     | update_server=False
[2025-05-08 16:21:17] 2025-05-08 20:21:05,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 16:21:17] 2025-05-08 20:21:06,042 | INFO     | PID=38790 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-08 16:21:17] 2025-05-08 20:21:06,042 | INFO     | .. there are 35 such processes running
[2025-05-08 16:21:17] 2025-05-08 20:21:06,043 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 16:21:17] 2025-05-08 20:21:06,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 16:21:17] 2025-05-08 20:21:06,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 16:21:17] 2025-05-08 20:21:06,143 | INFO     | all data control threads have been joined
[2025-05-08 16:21:17] 2025-05-08 20:21:06,269 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-08 16:21:17] 2025-05-08 20:21:06,269 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-08 16:21:17] 2025-05-08 20:21:06,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 16:21:17] 2025-05-08 20:21:06,270 | INFO     | will abort loop
[2025-05-08 16:21:17] 2025-05-08 20:21:06,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 16:21:17] 2025-05-08 20:21:06,940 | INFO     | [job] retrieve thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:07,013 | INFO     | all payload control threads have been joined
[2025-05-08 16:21:17] 2025-05-08 20:21:07,148 | INFO     | [data] control thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:07,236 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:07,275 | INFO     | [job] job monitor thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:07,300 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:07,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 16:21:17] 2025-05-08 20:21:07,524 | INFO     | all job control threads have been joined
[2025-05-08 16:21:17] 2025-05-08 20:21:07,628 | INFO     | [payload] validate_post thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:07,933 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:08,018 | INFO     | [payload] control thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:08,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:08,124 | INFO     | [job] validate thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:08,130 | INFO     | [data] copytool_in thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:08,146 | INFO     | [payload] failed_post thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:08,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 16:21:17] 2025-05-08 20:21:08,529 | INFO     | [job] control thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:09,402 | INFO     | [data] copytool_out thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:09,497 | INFO     | [job] queue monitor thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:10,586 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 16:21:17] 2025-05-08 20:21:11,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281574864704)>', '<ExcThread(monitor, started 140281131292416)>']
[2025-05-08 16:21:17] 2025-05-08 20:21:12,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 16:21:17] 2025-05-08 20:21:12,076 | INFO     | [monitor] control thread has ended
[2025-05-08 16:21:17] 2025-05-08 20:21:16,828 | INFO     | all workflow threads have been joined
[2025-05-08 16:21:17] 2025-05-08 20:21:16,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 16:21:17] 2025-05-08 20:21:16,829 | INFO     | traces error code: 0
[2025-05-08 16:21:17] 2025-05-08 20:21:16,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 16:21:17] 2025-05-08 20:21:17,028 [wrapper] ==== pilot stdout END ====
[2025-05-08 16:21:17] 2025-05-08 20:21:17,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 16:21:17] 2025-05-08 20:21:17,035 [wrapper] pilotpid: 38790
[2025-05-08 16:21:17] 2025-05-08 20:21:17,039 [wrapper] Pilot exit status: 0
[2025-05-08 16:21:17] 2025-05-08 20:21:17,051 [wrapper] pandaids: 6638221579
[2025-05-08 16:21:17] 2025-05-08 20:21:17,192 [wrapper] cleanup supervisor_pilot 14256 38791
[2025-05-08 16:21:17] 2025-05-08 20:21:17,196 [wrapper] Test setup, not cleaning
[2025-05-08 16:21:17] 2025-05-08 20:21:17,200 [wrapper] apfmon messages muted
[2025-05-08 16:21:17] 2025-05-08 20:21:17,203 [wrapper] ==== wrapper stdout END ====
[2025-05-08 16:21:17] 2025-05-08 20:21:17,208 [wrapper] ==== wrapper stderr END ====
[2025-05-08 16:21:17]  *** Error codes and diagnostics ***
[2025-05-08 16:21:17]     "exeErrorCode": 0,
[2025-05-08 16:21:17]     "exeErrorDiag": "",
[2025-05-08 16:21:17]     "pilotErrorCode": 0,
[2025-05-08 16:21:17]     "pilotErrorDiag": "",
[2025-05-08 16:21:17]  *** Listing of results directory ***
[2025-05-08 16:21:17] total 419468
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas    495897 May  8 03:40 pilot3.tar.gz
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas      5111 May  8 04:01 queuedata.json
[2025-05-08 16:21:17] -rwx------ 1 boincer umatlas     37140 May  8 04:02 runpilot2-wrapper.sh
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas       100 May  8 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 16:21:17] -rwxr-xr-x 1 boincer umatlas      7986 May  8 06:44 run_atlas
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas       105 May  8 06:44 job.xml
[2025-05-08 16:21:17] -rw-r--r-- 2 boincer umatlas 221981061 May  8 06:44 EVNT.44506061._001658.pool.root.1
[2025-05-08 16:21:17] -rw-r--r-- 2 boincer umatlas     17569 May  8 06:44 start_atlas.sh
[2025-05-08 16:21:17] drwxrwx--x 2 boincer umatlas      4096 May  8 06:44 shared
[2025-05-08 16:21:17] -rw-r--r-- 2 boincer umatlas    508883 May  8 06:44 input.tar.gz
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas         0 May  8 06:44 boinc_lockfile
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas      2558 May  8 06:45 pandaJob.out
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas       467 May  8 06:45 setup.sh.local
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas    996852 May  8 06:45 agis_schedconf.cvmfs.json
[2025-05-08 16:21:17] drwx------ 4 boincer umatlas      4096 May  8 06:45 pilot3
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas      6036 May  8 16:19 init_data.xml
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas        95 May  8 16:20 pilot_heartbeat.json
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas 197212597 May  8 16:20 HITS.44506063._050981.pool.root.1
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas       531 May  8 16:20 boinc_task_state.xml
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas      1060 May  8 16:20 memory_monitor_summary.json
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas   1596741 May  8 16:20 agis_ddmendpoints.agis.ALL.json
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas    601458 May  8 16:20 log.44506063._050981.job.log.tgz.1
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas      7747 May  8 16:21 heartbeat.json
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas      8192 May  8 16:21 boinc_mmap_file
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas        28 May  8 16:21 wrapper_checkpoint.txt
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas      4933 May  8 16:21 pilotlog.txt
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas   2648086 May  8 16:21 log.44506063._050981.job.log.1
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas       357 May  8 16:21 output.list
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas       620 May  8 16:21 runtime_log
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas   3266560 May  8 16:21 result.tar.gz
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas     11421 May  8 16:21 runtime_log.err
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas       664 May  8 16:21 mVqLDm5NBX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmml8LDmgfWTlm.diag
[2025-05-08 16:21:17] -rw-r--r-- 1 boincer umatlas     21066 May  8 16:21 stderr.txt
[2025-05-08 16:21:17] HITS file was successfully produced:
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas 197212597 May  8 16:20 shared/HITS.pool.root.1
[2025-05-08 16:21:17]  *** Contents of shared directory: ***
[2025-05-08 16:21:17] total 413088
[2025-05-08 16:21:17] -rw-r--r-- 2 boincer umatlas 221981061 May  8 06:44 ATLAS.root_0
[2025-05-08 16:21:17] -rw-r--r-- 2 boincer umatlas     17569 May  8 06:44 start_atlas.sh
[2025-05-08 16:21:17] -rw-r--r-- 2 boincer umatlas    508883 May  8 06:44 input.tar.gz
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas 197212597 May  8 16:20 HITS.pool.root.1
[2025-05-08 16:21:17] -rw------- 1 boincer umatlas   3266560 May  8 16:21 result.tar.gz
16:21:19 (29943): run_atlas exited; CPU time 97939.230456
16:21:19 (29943): called boinc_finish(0)

</stderr_txt>
]]>

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