Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:29:10 (231263): wrapper (7.7.26015): starting
01:29:10 (231263): wrapper: running run_atlas (--nthreads 4)
[2025-05-09 01:29:10] Arguments: --nthreads 4
[2025-05-09 01:29:10] Threads: 4
[2025-05-09 01:29:10] Checking for CVMFS
[2025-05-09 01:29:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-09 01:29:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-09 01:29:10] Running cvmfs_config stat atlas.cern.ch
[2025-05-09 01:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-09 01:29:10] 2.9.2.0 3057 768 79376 145774 1 56 5162096 36864000 0 130560 0 580892 99.990 275438 4531 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-09 01:29:10] CVMFS is ok
[2025-05-09 01:29:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-09 01:29:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-09 01:29:10] Further information can be found at the LHC@home message board.
[2025-05-09 01:29:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-09 01:29:10] Checking for apptainer binary...
[2025-05-09 01:29:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-09 01:29:10] Running /usr/bin/apptainer --version
[2025-05-09 01:29:10] apptainer version 1.3.6-6.1
[2025-05-09 01:29:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-09 01:29:10] magicA250
[2025-05-09 01:29:10] apptainer works
[2025-05-09 01:29:11] Set ATHENA_PROC_NUMBER=4
[2025-05-09 01:29:11] Set ATHENA_CORE_NUMBER=4
[2025-05-09 01:29:11] Starting ATLAS job with PandaID=6638218987
[2025-05-09 01:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-09 02:55:28]  *** The last 200 lines of the pilot log: ***
[2025-05-09 02:55:28]  guid=77335c1a-b749-4a8d-a5f6-39d2d854ebdd
[2025-05-09 02:55:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-09 02:55:28]  is_altstaged=None
[2025-05-09 02:55:28]  is_tar=False
[2025-05-09 02:55:28]  lfn=log.44506063._050278.job.log.tgz.1
[2025-05-09 02:55:28]  mtime=0
[2025-05-09 02:55:28]  protocol_id=None
[2025-05-09 02:55:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-09 02:55:28]  replicas=None
[2025-05-09 02:55:28]  scope=mc23_13p6TeV
[2025-05-09 02:55:28]  status=None
[2025-05-09 02:55:28]  status_code=0
[2025-05-09 02:55:28]  storage_token=
[2025-05-09 02:55:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6638218987/log.44506063._050278.job.log.tgz.1
[2025-05-09 02:55:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/b1/log.44506063._050278.job.log.tgz.1
[2025-05-09 02:55:28]  workdir=None
[2025-05-09 02:55:28] ]
[2025-05-09 02:55:28] 2025-05-09 00:55:11,368 | INFO     | transferring file log.44506063._050278.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6638218987/log.44506063._050278.job.log.tgz.1 to /local/data/boinc/
[2025-05-09 02:55:28] 2025-05-09 00:55:11,368 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6638218987/log.44506063._050278.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0502
[2025-05-09 02:55:28] 2025-05-09 00:55:11,387 | INFO     | adding to output.list: log.44506063._050278.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/b1/log.44506063._050278.job.log.tg
[2025-05-09 02:55:28] 2025-05-09 00:55:11,388 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-09 02:55:28] 2025-05-09 00:55:11,388 | INFO     | summary of transferred files:
[2025-05-09 02:55:28] 2025-05-09 00:55:11,388 | INFO     |  -- lfn=log.44506063._050278.job.log.tgz.1, status_code=0, status=transferred
[2025-05-09 02:55:28] 2025-05-09 00:55:11,388 | INFO     | stage-out finished correctly
[2025-05-09 02:55:28] 2025-05-09 00:55:11,635 | INFO     | PID=234977 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-09 02:55:28] 2025-05-09 00:55:12,243 | INFO     | monitor loop #396: job 0:6638218987 is in state 'finished'
[2025-05-09 02:55:28] 2025-05-09 00:55:12,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 02:55:28] 2025-05-09 00:55:12,411 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-09 02:55:28] 2025-05-09 00:55:12,454 | INFO     | job 6638218987 has state=finished
[2025-05-09 02:55:28] 2025-05-09 00:55:12,454 | INFO     | preparing for final server update for job 6638218987 in state='finished'
[2025-05-09 02:55:28] 2025-05-09 00:55:12,454 | INFO     | this job has now completed (state=finished)
[2025-05-09 02:55:28] 2025-05-09 00:55:12,454 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-09 02:55:28] 2025-05-09 00:55:12,454 | INFO     | log transfer has been attempted: DONE
[2025-05-09 02:55:28] 2025-05-09 00:55:12,454 | INFO     | job 6638218987 has finished - writing final server update
[2025-05-09 02:55:28] 2025-05-09 00:55:12,454 | INFO     | total number of processed events: 400 (read)
[2025-05-09 02:55:28] 2025-05-09 00:55:12,456 | INFO     | executing command: lscpu
[2025-05-09 02:55:28] 2025-05-09 00:55:12,476 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-09 02:55:28] 2025-05-09 00:55:14,746 | INFO     | monitor loop #397: job 0:6638218987 is in state 'finished'
[2025-05-09 02:55:28] 2025-05-09 00:55:14,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 02:55:28] 2025-05-09 00:55:17,249 | INFO     | monitor loop #398: job 0:6638218987 is in state 'finished'
[2025-05-09 02:55:28] 2025-05-09 00:55:17,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-09 02:55:28] 2025-05-09 00:55:17,377 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-09 02:55:28] 2025-05-09 00:55:17,377 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6638218987/memory_monitor_summary.json (trf name=prmon)
[2025-05-09 02:55:28] 2025-05-09 00:55:17,378 | INFO     | extracted standard info from prmon json
[2025-05-09 02:55:28] 2025-05-09 00:55:17,378 | INFO     | extracted standard memory fields from prmon json
[2025-05-09 02:55:28] 2025-05-09 00:55:17,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-09 02:55:28] 2025-05-09 00:55:17,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-09 02:55:28] 2025-05-09 00:55:17,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | fitting pss+swap vs Time
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | sum of square deviations: 147126479.5
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | sum of deviations: 175011470.49999678
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | mean x: 1746749635.5
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | mean y: 2486210.858974359
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | -- intersect: -2075326181.1937313
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | intersect: -2075326181.1937313
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | chi2: 1.3807989606768405
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | -- intersect: -2075326181.1937313
[2025-05-09 02:55:28] 2025-05-09 00:55:17,379 | INFO     | current memory leak: 1.19 B/s (using 78 data points, chi2=1.38)
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | ..............................
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . Timing measurements:
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . get job = 0 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . initial setup = 1 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . payload setup = 4 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . stage-in = 0 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . payload execution = 5130 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . stage-out = 0 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | . log creation = 0 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,380 | INFO     | ..............................
[2025-05-09 02:55:28] 2025-05-09 00:55:17,421 | INFO     | 
[2025-05-09 02:55:28] 2025-05-09 00:55:17,421 | INFO     | job summary report
[2025-05-09 02:55:28] 2025-05-09 00:55:17,421 | INFO     | --------------------------------------------------
[2025-05-09 02:55:28] 2025-05-09 00:55:17,421 | INFO     | PanDA job id: 6638218987
[2025-05-09 02:55:28] 2025-05-09 00:55:17,421 | INFO     | task id: 44506063
[2025-05-09 02:55:28] 2025-05-09 00:55:17,421 | INFO     | errors: (none)
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | pilot state: finished 
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | transexitcode: 0
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | exeerrorcode: 0
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | exeerrordiag: 
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | exitcode: 0
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | exitmsg: OK
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | cpuconsumptiontime: 17715 s
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | nevents: 400
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | neventsw: 0
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | pid: 241546
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | pgrp: 241546
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | corecount: 4
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | event service: False
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | sizes: {0: 2393692, 4: 2393898, 11: 2393926, 5138: 2429341, 5139: 2429341, 5144: 2429511}
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | --------------------------------------------------
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | 
[2025-05-09 02:55:28] 2025-05-09 00:55:17,422 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-09 02:55:28] 2025-05-09 00:55:17,441 | INFO     | job 6638218987 has completed (purged errors)
[2025-05-09 02:55:28] 2025-05-09 00:55:17,442 | INFO     | overall cleanup function is called
[2025-05-09 02:55:28] 2025-05-09 00:55:18,448 | INFO     | --- collectZombieJob: --- 10, [241546]
[2025-05-09 02:55:28] 2025-05-09 00:55:18,449 | INFO     | zombie collector waiting for pid 241546
[2025-05-09 02:55:28] 2025-05-09 00:55:18,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-09 02:55:28] 2025-05-09 00:55:18,449 | INFO     | collected zombie processes
[2025-05-09 02:55:28] 2025-05-09 00:55:18,449 | INFO     | will attempt to kill all subprocesses of pid=241546
[2025-05-09 02:55:28] 2025-05-09 00:55:18,495 | INFO     | process IDs to be killed: [241546] (in reverse order)
[2025-05-09 02:55:28] 2025-05-09 00:55:18,529 | WARNING  | found no corresponding commands to process id(s)
[2025-05-09 02:55:28] 2025-05-09 00:55:18,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-09 02:55:28] 2025-05-09 00:55:18,531 | INFO     | did not find any defunct processes belonging to 241546
[2025-05-09 02:55:28] 2025-05-09 00:55:18,533 | INFO     | did not find any defunct processes belonging to 241546
[2025-05-09 02:55:28] 2025-05-09 00:55:18,533 | INFO     | ready for new job
[2025-05-09 02:55:28] 2025-05-09 00:55:18,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-09 02:55:28] 2025-05-09 00:55:18,534 | INFO     | **************************************
[2025-05-09 02:55:28] 2025-05-09 00:55:18,534 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-09 02:55:28] 2025-05-09 00:55:18,534 | INFO     | **************************************
[2025-05-09 02:55:28] 2025-05-09 00:55:18,534 | INFO     | 
[2025-05-09 02:55:28] 2025-05-09 00:55:18,534 | INFO     | architecture information:
[2025-05-09 02:55:28] 2025-05-09 00:55:18,534 | INFO     | executing command: cat /etc/os-release
[2025-05-09 02:55:28] 2025-05-09 00:55:18,549 | INFO     | cat /etc/os-release:
[2025-05-09 02:55:28] NAME="CentOS Linux"
[2025-05-09 02:55:28] VERSION="7 (Core)"
[2025-05-09 02:55:28] ID="centos"
[2025-05-09 02:55:28] ID_LIKE="rhel fedora"
[2025-05-09 02:55:28] VERSION_ID="7"
[2025-05-09 02:55:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-09 02:55:28] ANSI_COLOR="0;31"
[2025-05-09 02:55:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-09 02:55:28] HOME_URL="https://www.centos.org/"
[2025-05-09 02:55:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-09 02:55:28] 
[2025-05-09 02:55:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-09 02:55:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-09 02:55:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-09 02:55:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-09 02:55:28] 
[2025-05-09 02:55:28] 2025-05-09 00:55:18,549 | INFO     | **************************************
[2025-05-09 02:55:28] 2025-05-09 00:55:19,053 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-09 02:55:28] 2025-05-09 00:55:19,070 | INFO     | sufficient remaining disk space (355459923968 B)
[2025-05-09 02:55:28] 2025-05-09 00:55:19,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-09 02:55:28] 2025-05-09 00:55:19,071 | INFO     | current server update state: UPDATING_FINAL
[2025-05-09 02:55:28] 2025-05-09 00:55:19,071 | INFO     | update_server=False
[2025-05-09 02:55:28] 2025-05-09 00:55:19,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-09 02:55:28] 2025-05-09 00:55:19,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-09 02:55:28] 2025-05-09 00:55:19,071 | INFO     | aborting loop
[2025-05-09 02:55:28] 2025-05-09 00:55:19,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-09 02:55:28] 2025-05-09 00:55:19,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-09 02:55:28] 2025-05-09 00:55:19,203 | INFO     | all data control threads have been joined
[2025-05-09 02:55:28] 2025-05-09 00:55:19,382 | INFO     | all payload control threads have been joined
[2025-05-09 02:55:28] 2025-05-09 00:55:19,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-09 02:55:28] 2025-05-09 00:55:19,656 | INFO     | found 0 job(s) in 20 queues
[2025-05-09 02:55:28] 2025-05-09 00:55:19,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-09 02:55:28] 2025-05-09 00:55:19,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-09 02:55:28] 2025-05-09 00:55:20,076 | INFO     | [job] retrieve thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:20,076 | INFO     | [job] job monitor thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:20,077 | INFO     | [job] queue monitor thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:20,208 | INFO     | [data] control thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:20,256 | INFO     | [job] validate thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:20,305 | INFO     | [payload] failed_post thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:20,388 | INFO     | [payload] control thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:20,736 | INFO     | all job control threads have been joined
[2025-05-09 02:55:28] 2025-05-09 00:55:20,969 | INFO     | [payload] execute_payloads thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:21,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:21,155 | INFO     | [data] copytool_in thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:21,431 | INFO     | [job] create_data_payload thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:21,446 | INFO     | [data] copytool_out thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:21,522 | INFO     | [payload] validate_pre thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:21,621 | INFO     | [payload] validate_post thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:21,742 | INFO     | [job] control thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:23,078 | INFO     | [data] queue_monitor thread has finished
[2025-05-09 02:55:28] 2025-05-09 00:55:23,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947715344192)>', '<ExcThread(monitor, started 139946845255424)>']
[2025-05-09 02:55:28] 2025-05-09 00:55:23,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-09 02:55:28] 2025-05-09 00:55:23,677 | INFO     | [monitor] control thread has ended
[2025-05-09 02:55:28] 2025-05-09 00:55:28,326 | INFO     | all workflow threads have been joined
[2025-05-09 02:55:28] 2025-05-09 00:55:28,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-09 02:55:28] 2025-05-09 00:55:28,326 | INFO     | traces error code: 0
[2025-05-09 02:55:28] 2025-05-09 00:55:28,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-09 02:55:28] 2025-05-09 00:55:28,405 [wrapper] ==== pilot stdout END ====
[2025-05-09 02:55:28] 2025-05-09 00:55:28,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-09 02:55:28] 2025-05-09 00:55:28,414 [wrapper] pilotpid: 234977
[2025-05-09 02:55:28] 2025-05-09 00:55:28,418 [wrapper] Pilot exit status: 0
[2025-05-09 02:55:28] 2025-05-09 00:55:28,430 [wrapper] pandaids: 6638218987
[2025-05-09 02:55:28] 2025-05-09 00:55:28,454 [wrapper] cleanup supervisor_pilot  253848 234978
[2025-05-09 02:55:28] 2025-05-09 00:55:28,458 [wrapper] Test setup, not cleaning
[2025-05-09 02:55:28] 2025-05-09 00:55:28,462 [wrapper] apfmon messages muted
[2025-05-09 02:55:28] 2025-05-09 00:55:28,466 [wrapper] ==== wrapper stdout END ====
[2025-05-09 02:55:28] 2025-05-09 00:55:28,470 [wrapper] ==== wrapper stderr END ====
[2025-05-09 02:55:28]  *** Error codes and diagnostics ***
[2025-05-09 02:55:28]     "exeErrorCode": 0,
[2025-05-09 02:55:28]     "exeErrorDiag": "",
[2025-05-09 02:55:28]     "pilotErrorCode": 0,
[2025-05-09 02:55:28]     "pilotErrorDiag": "",
[2025-05-09 02:55:28]  *** Listing of results directory ***
[2025-05-09 02:55:28] total 420140
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc    495897 May  8 08:57 pilot3.tar.gz
[2025-05-09 02:55:28] -rwx------ 1 boinc boinc     37140 May  8 09:03 runpilot2-wrapper.sh
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc      5111 May  8 09:03 queuedata.json
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc       100 May  9 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-09 02:55:28] -rwxr-xr-x 1 boinc boinc      7986 May  9 01:29 run_atlas
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc       105 May  9 01:29 job.xml
[2025-05-09 02:55:28] -rw-r--r-- 2 boinc boinc 223886646 May  9 01:29 EVNT.44506061._001107.pool.root.1
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc      6858 May  9 01:29 init_data.xml
[2025-05-09 02:55:28] drwxrwx--x 2 boinc boinc      4096 May  9 01:29 shared
[2025-05-09 02:55:28] -rw-r--r-- 2 boinc boinc    508885 May  9 01:29 input.tar.gz
[2025-05-09 02:55:28] -rw-r--r-- 2 boinc boinc     17569 May  9 01:29 start_atlas.sh
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc         0 May  9 01:29 boinc_lockfile
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc      2558 May  9 01:29 pandaJob.out
[2025-05-09 02:55:28] -rw------- 1 boinc boinc       424 May  9 01:29 setup.sh.local
[2025-05-09 02:55:28] -rw------- 1 boinc boinc    997945 May  9 01:29 agis_schedconf.cvmfs.json
[2025-05-09 02:55:28] -rw------- 1 boinc boinc   1596741 May  9 01:29 agis_ddmendpoints.agis.ALL.json
[2025-05-09 02:55:28] drwx------ 4 boinc boinc      4096 May  9 01:29 pilot3
[2025-05-09 02:55:28] -rw------- 1 boinc boinc        95 May  9 02:54 pilot_heartbeat.json
[2025-05-09 02:55:28] -rw------- 1 boinc boinc 200987028 May  9 02:54 HITS.44506063._050278.pool.root.1
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc       529 May  9 02:54 boinc_task_state.xml
[2025-05-09 02:55:28] -rw------- 1 boinc boinc      1024 May  9 02:55 memory_monitor_summary.json
[2025-05-09 02:55:28] -rw------- 1 boinc boinc    252425 May  9 02:55 log.44506063._050278.job.log.tgz.1
[2025-05-09 02:55:28] -rw------- 1 boinc boinc      7668 May  9 02:55 heartbeat.json
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc      8192 May  9 02:55 boinc_mmap_file
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc        27 May  9 02:55 wrapper_checkpoint.txt
[2025-05-09 02:55:28] -rw------- 1 boinc boinc      4357 May  9 02:55 pilotlog.txt
[2025-05-09 02:55:28] -rw------- 1 boinc boinc    498742 May  9 02:55 log.44506063._050278.job.log.1
[2025-05-09 02:55:28] -rw------- 1 boinc boinc       357 May  9 02:55 output.list
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc       620 May  9 02:55 runtime_log
[2025-05-09 02:55:28] -rw------- 1 boinc boinc    768000 May  9 02:55 result.tar.gz
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc     11114 May  9 02:55 runtime_log.err
[2025-05-09 02:55:28] -rw------- 1 boinc boinc       661 May  9 02:55 Lx8MDm6SAX7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjc8LDmv4DeSn.diag
[2025-05-09 02:55:28] -rw-r--r-- 1 boinc boinc     21367 May  9 02:55 stderr.txt
[2025-05-09 02:55:28] HITS file was successfully produced:
[2025-05-09 02:55:28] -rw------- 1 boinc boinc 200987028 May  9 02:54 shared/HITS.pool.root.1
[2025-05-09 02:55:28]  *** Contents of shared directory: ***
[2025-05-09 02:55:28] total 416200
[2025-05-09 02:55:28] -rw-r--r-- 2 boinc boinc 223886646 May  9 01:29 ATLAS.root_0
[2025-05-09 02:55:28] -rw-r--r-- 2 boinc boinc    508885 May  9 01:29 input.tar.gz
[2025-05-09 02:55:28] -rw-r--r-- 2 boinc boinc     17569 May  9 01:29 start_atlas.sh
[2025-05-09 02:55:28] -rw------- 1 boinc boinc 200987028 May  9 02:54 HITS.pool.root.1
[2025-05-09 02:55:28] -rw------- 1 boinc boinc    768000 May  9 02:55 result.tar.gz
02:55:29 (231263): run_atlas exited; CPU time 17730.797767
02:55:29 (231263): called boinc_finish(0)

</stderr_txt>
]]>

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