Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-08 09:44:28 (66244): Detected: vboxwrapper 26206
2025-05-08 09:44:28 (66244): Detected: BOINC client v8.0.2
2025-05-08 09:44:29 (66244): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-08 09:44:29 (66244): Successfully copied 'init_data.xml' to the shared directory.
2025-05-08 09:44:30 (66244): Create VM. (boinc_4efdbb3025b8e61d, slot#16)
2025-05-08 09:44:30 (66244): Setting Memory Size for VM. (4800MB)
2025-05-08 09:44:31 (66244): Setting CPU Count for VM. (8)
2025-05-08 09:44:31 (66244): Setting Chipset Options for VM.
2025-05-08 09:44:31 (66244): Setting Graphics Controller Options for VM.
2025-05-08 09:44:31 (66244): Setting Boot Options for VM.
2025-05-08 09:44:32 (66244): Setting Network Configuration for NAT.
2025-05-08 09:44:32 (66244): Enabling VM Network Access.
2025-05-08 09:44:32 (66244): Disabling USB Support for VM.
2025-05-08 09:44:32 (66244): Disabling COM Port Support for VM.
2025-05-08 09:44:33 (66244): Disabling LPT Port Support for VM.
2025-05-08 09:44:33 (66244): Disabling Audio Support for VM.
2025-05-08 09:44:33 (66244): Disabling Clipboard Support for VM.
2025-05-08 09:44:33 (66244): Disabling Drag and Drop Support for VM.
2025-05-08 09:44:34 (66244): Adding storage controller(s) to VM.
2025-05-08 09:44:34 (66244): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-08 09:44:37 (66244): Adding VirtualBox Guest Additions to VM.
2025-05-08 09:44:37 (66244): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-08 09:44:37 (66244): forwarding host port 60846 to guest port 80
2025-05-08 09:44:38 (66244): Enabling remote desktop for VM.
2025-05-08 09:44:38 (66244): Required extension pack not installed, remote desktop not enabled.
2025-05-08 09:44:38 (66244): Enabling shared directory for VM.
2025-05-08 09:44:39 (66244): Starting VM using VBoxManage interface. (boinc_4efdbb3025b8e61d, slot#16)
2025-05-08 09:44:44 (66244): Successfully started VM. (PID = '83076')
2025-05-08 09:44:44 (66244): Reporting VM Process ID to BOINC.
2025-05-08 09:44:44 (66244): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-08 09:44:44 (66244): Guest Log: CPUID EDX: 0x178bfbff
2025-05-08 09:44:44 (66244): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-08 09:44:44 (66244): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-08 09:44:44 (66244): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-08 09:44:44 (66244): Detected: Web Application Enabled (http://localhost:60846)
2025-05-08 09:44:44 (66244): Preference change detected
2025-05-08 09:44:44 (66244): Setting CPU throttle for VM. (90%)
2025-05-08 09:44:44 (66244): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-08 09:44:46 (66244): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-08 09:44:46 (66244): Guest Log: BIOS: Booting from Hard Disk...
2025-05-08 09:44:49 (66244): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-08 09:44:49 (66244): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-08 09:44:49 (66244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-08 09:44:59 (66244): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-08 09:44:59 (66244): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-08 09:45:07 (66244): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.000269 main     Log opened 2025-05-08T09:45:04.884880000Z
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.000432 main     OS Product: Linux
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.000481 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.000521 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.000563 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.000564 main     Process ID: 1395
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.000565 main     Package type: LINUX_64BITS_GENERIC
2025-05-08 09:45:07 (66244): Guest Log: 00:00:00.001769 main     5.2.32 r132073 started. Verbose level = 0
2025-05-08 09:45:07 (66244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-08 09:45:07 (66244): Guest Log: [INFO] Mounting shared directory
2025-05-08 09:45:07 (66244): Guest Log: [INFO] Checking for init_data.xml
2025-05-08 09:45:16 (66244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-08 09:45:16 (66244): Guest Log: [INFO] Detected branch: prod
2025-05-08 09:45:17 (66244): Guest Log: 00:00:10.016464 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 394 929 000ns (GuestNow=1 746 690 316 494 023 000 ns GuestLast=1 746 697 504 888 952 000 ns fSetTimeLastLoop=true )
2025-05-08 09:45:17 (66244): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-08 09:45:17 (66244): Guest Log: Copying input files
2025-05-08 09:45:19 (66244): Guest Log: Copied input files into RunAtlas.
2025-05-08 09:45:19 (66244): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-08 09:45:19 (66244): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-08 09:45:19 (66244): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-08 09:45:19 (66244): Guest Log: Further information can be found at the LHC@home message board.
2025-05-08 09:45:28 (66244): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-08 09:45:28 (66244): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-08 09:45:28 (66244): Guest Log: 2.6.3.0 1674 0 30192 145741 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-08 09:45:29 (66244): Guest Log: copied the webapp to /var/www
2025-05-08 09:45:29 (66244): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-08 09:45:29 (66244): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-08 09:45:29 (66244): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-08 09:45:29 (66244): Guest Log:  *** Starting ATLAS job. (PandaID=6637931822 taskID=44506063) ***
2025-05-08 10:28:18 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 10:28:38 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 10:28:49 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 10:29:09 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 10:33:50 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 10:34:10 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 10:35:50 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 10:36:10 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 10:53:42 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 10:54:02 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 11:09:25 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 11:09:45 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 11:15:36 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 11:15:56 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 11:16:45 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 11:17:06 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 11:17:15 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 11:17:35 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 11:28:09 (66244): Status Report: Elapsed Time: '6000.000000'
2025-05-08 11:28:09 (66244): Status Report: CPU Time: '35628.828125'
2025-05-08 11:42:19 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 11:42:39 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 11:55:51 (66244): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 11:56:12 (66244): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 11:57:42 (66244): Guest Log:  *** Job finished ***
2025-05-08 11:57:42 (66244): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:53:52,189 | INFO     | [payload] validate_post thread has finished
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:53:52,236 | INFO     | [payload] control thread has finished
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:53:55,561 | INFO     | [data] queue_monitor thread has finished
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:53:57,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325592663872)>', '<ExcThread(monitor, started 140325012096768)>']
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:53:57,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:53:57,816 | INFO     | [monitor] control thread has ended
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,374 | INFO     | all workflow threads have been joined
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,375 | INFO     | end of generic workflow (traces error code: 0)
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,375 | INFO     | traces error code: 0
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,506 [wrapper] ==== pilot stdout END ====
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,512 [wrapper] ==== wrapper stdout RESUME ====
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,517 [wrapper] pilotpid: 6025
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,523 [wrapper] Pilot exit status: 0
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,660 [wrapper] pandaids: 6637931822
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,709 [wrapper] cleanup supervisor_pilot  3715 6026
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,724 [wrapper] Test setup, not cleaning
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,732 [wrapper] apfmon messages muted
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,739 [wrapper] ==== wrapper stdout END ====
2025-05-08 11:57:42 (66244): Guest Log: 2025-05-08 09:54:02,746 [wrapper] ==== wrapper stderr END ====
2025-05-08 11:57:42 (66244): Guest Log:  *** Error codes and diagnostics ***
2025-05-08 11:57:42 (66244): Guest Log:     "exeErrorCode": 0,
2025-05-08 11:57:42 (66244): Guest Log:     "exeErrorDiag": "",
2025-05-08 11:57:42 (66244): Guest Log:     "pilotErrorCode": 0,
2025-05-08 11:57:42 (66244): Guest Log:     "pilotErrorDiag": "",
2025-05-08 11:57:42 (66244): Guest Log:  *** Listing of results directory ***
2025-05-08 11:57:42 (66244): Guest Log: total 196240
2025-05-08 11:57:42 (66244): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  8 00:54 pilot3.tar.gz
2025-05-08 11:57:42 (66244): Guest Log: -rwx------. 1 atlas atlas     37140 May  8 01:23 runpilot2-wrapper.sh
2025-05-08 11:57:42 (66244): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  8 01:23 queuedata.json
2025-05-08 11:57:42 (66244): Guest Log: -rwxr-xr-x. 1 atlas atlas     12245 May  8 07:45 init_data.xml
2025-05-08 11:57:42 (66244): Guest Log: -rwxr-xr-x. 1 atlas atlas    508885 May  8 07:45 input.tar.gz
2025-05-08 11:57:42 (66244): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  8 07:45 start_atlas.sh
2025-05-08 11:57:42 (66244): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  8 07:45 EVNT.44506061._001852.pool.root.1 -> /data/./ATLAS.root_0
2025-05-08 11:57:42 (66244): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May  8 07:45 pandaJob.out
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas       424 May  8 07:45 setup.sh.local
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas    996852 May  8 07:46 agis_schedconf.cvmfs.json
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas   1596741 May  8 07:46 agis_ddmendpoints.agis.ALL.json
2025-05-08 11:57:42 (66244): Guest Log: drwx------. 4 atlas atlas      4096 May  8 07:46 pilot3
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas 195248284 May  8 09:52 HITS.44506063._046447.pool.root.1
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas      1028 May  8 09:53 memory_monitor_summary.json
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas    318960 May  8 09:53 log.44506063._046447.job.log.tgz.1
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas        95 May  8 09:53 pilot_heartbeat.json
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas      7683 May  8 09:53 heartbeat.json
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas      4536 May  8 09:54 pilotlog.txt
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas    641614 May  8 09:54 log.44506063._046447.job.log.1
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas       357 May  8 09:54 output.list
2025-05-08 11:57:42 (66244): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  8 09:54 runtime_log
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas    983040 May  8 09:54 result.tar.gz
2025-05-08 11:57:42 (66244): Guest Log: -rw-r--r--. 1 atlas atlas     10958 May  8 09:54 runtime_log.err
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas       663 May  8 09:54 m7LLDml94W7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmS07LDmVp8fem.diag
2025-05-08 11:57:42 (66244): Guest Log: Looking for outputfile HITS.44506063._046447.pool.root.1
2025-05-08 11:57:42 (66244): Guest Log: HITS file was successfully produced
2025-05-08 11:57:42 (66244): Guest Log: -rw-------. 1 atlas atlas 195248284 May  8 09:52 /home/atlas/RunAtlas/HITS.44506063._046447.pool.root.1
2025-05-08 11:57:44 (66244): Guest Log: Successfully finished the ATLAS job!
2025-05-08 11:57:44 (66244): Guest Log: Copying the results back to the shared directory!
2025-05-08 11:57:44 (66244): Guest Log:  *** Contents of shared directory: ***
2025-05-08 11:57:44 (66244): Guest Log: total 409420
2025-05-08 11:57:44 (66244): Guest Log: -rwxrwxrwx. 1 root root 222462975 May  8 07:44 ATLAS.root_0
2025-05-08 11:57:44 (66244): Guest Log: -rwxrwxrwx. 1 root root 195248284 May  8  2025 HITS.pool.root.1
2025-05-08 11:57:44 (66244): Guest Log: -rwxrwxrwx. 1 root root     12245 May  8 07:44 init_data.xml
2025-05-08 11:57:44 (66244): Guest Log: -rwxrwxrwx. 1 root root    508885 May  8 07:44 input.tar.gz
2025-05-08 11:57:44 (66244): Guest Log: -rwxrwxrwx. 1 root root    983040 May  8  2025 result.tar.gz
2025-05-08 11:57:44 (66244): Guest Log: -rwxrwxrwx. 1 root root     17569 May  8 07:44 start_atlas.sh
2025-05-08 11:57:44 (66244): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-08 11:57:44 (66244): VM Completion File Detected.
2025-05-08 11:57:44 (66244): Powering off VM.
2025-05-08 11:57:44 (66244): Successfully stopped VM.
2025-05-08 11:57:44 (66244): Deregistering VM. (boinc_4efdbb3025b8e61d, slot#16)
2025-05-08 11:57:44 (66244): Removing network bandwidth throttle group from VM.
2025-05-08 11:57:45 (66244): Removing VM from VirtualBox.
11:57:50 (66244): called boinc_finish(0)

</stderr_txt>
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