Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:00:58 (1529366): wrapper (7.7.26015): starting
20:00:58 (1529366): wrapper: running run_atlas (--nthreads 4)
[2025-05-08 20:00:58] Arguments: --nthreads 4
[2025-05-08 20:00:58] Threads: 4
[2025-05-08 20:00:58] Checking for CVMFS
[2025-05-08 20:00:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 20:00:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 20:00:58] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 20:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 20:00:58] 2.9.2.0 13847 5069 94332 145765 0 56 36839515 36864000 0 130560 0 3852662 99.990 1265460 8402 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 20:00:58] CVMFS is ok
[2025-05-08 20:00:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 20:00:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 20:00:58] Further information can be found at the LHC@home message board.
[2025-05-08 20:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 20:00:58] Checking for apptainer binary...
[2025-05-08 20:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 20:00:58] Running /usr/bin/apptainer --version
[2025-05-08 20:00:58] apptainer version 1.3.6-6.1
[2025-05-08 20:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 20:00:58] cosA131b
[2025-05-08 20:00:58] apptainer works
[2025-05-08 20:00:58] Set ATHENA_PROC_NUMBER=4
[2025-05-08 20:00:58] Set ATHENA_CORE_NUMBER=4
[2025-05-08 20:00:58] Starting ATLAS job with PandaID=6637939696
[2025-05-08 20:00:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 21:27:56]  *** The last 200 lines of the pilot log: ***
[2025-05-08 21:27:56]  filetype=log
[2025-05-08 21:27:56]  guid=47831419-0cba-4fe5-8df7-5c02a4d04a0e
[2025-05-08 21:27:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-08 21:27:56]  is_altstaged=None
[2025-05-08 21:27:56]  is_tar=False
[2025-05-08 21:27:56]  lfn=log.44506063._048914.job.log.tgz.1
[2025-05-08 21:27:56]  mtime=0
[2025-05-08 21:27:56]  protocol_id=None
[2025-05-08 21:27:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-08 21:27:56]  replicas=None
[2025-05-08 21:27:56]  scope=mc23_13p6TeV
[2025-05-08 21:27:56]  status=None
[2025-05-08 21:27:56]  status_code=0
[2025-05-08 21:27:56]  storage_token=
[2025-05-08 21:27:56]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6637939696/log.44506063._048914.job.log.tgz.1
[2025-05-08 21:27:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/29/log.44506063._048914.job.log.tgz.1
[2025-05-08 21:27:56]  workdir=None
[2025-05-08 21:27:56] ]
[2025-05-08 21:27:56] 2025-05-08 19:27:32,313 | INFO     | transferring file log.44506063._048914.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6637939696/log.44506063._048914.job.log.tgz.1 to /local/data/boinc/
[2025-05-08 21:27:56] 2025-05-08 19:27:32,313 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6637939696/log.44506063._048914.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0489
[2025-05-08 21:27:56] 2025-05-08 19:27:32,333 | INFO     | adding to output.list: log.44506063._048914.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/29/log.44506063._048914.job.log.tg
[2025-05-08 21:27:56] 2025-05-08 19:27:32,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-08 21:27:56] 2025-05-08 19:27:32,333 | INFO     | summary of transferred files:
[2025-05-08 21:27:56] 2025-05-08 19:27:32,333 | INFO     |  -- lfn=log.44506063._048914.job.log.tgz.1, status_code=0, status=transferred
[2025-05-08 21:27:56] 2025-05-08 19:27:32,334 | INFO     | stage-out finished correctly
[2025-05-08 21:27:56] 2025-05-08 19:27:32,374 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-08 21:27:56] 2025-05-08 19:27:32,414 | INFO     | job 6637939696 has state=finished
[2025-05-08 21:27:56] 2025-05-08 19:27:32,414 | INFO     | preparing for final server update for job 6637939696 in state='finished'
[2025-05-08 21:27:56] 2025-05-08 19:27:32,414 | INFO     | this job has now completed (state=finished)
[2025-05-08 21:27:56] 2025-05-08 19:27:32,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-08 21:27:56] 2025-05-08 19:27:32,414 | INFO     | log transfer has been attempted: DONE
[2025-05-08 21:27:56] 2025-05-08 19:27:32,414 | INFO     | job 6637939696 has finished - writing final server update
[2025-05-08 21:27:56] 2025-05-08 19:27:32,415 | INFO     | total number of processed events: 400 (read)
[2025-05-08 21:27:56] 2025-05-08 19:27:32,416 | INFO     | executing command: lscpu
[2025-05-08 21:27:56] 2025-05-08 19:27:32,437 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-08 21:27:56] 2025-05-08 19:27:34,300 | INFO     | monitor loop #400: job 0:6637939696 is in state 'finished'
[2025-05-08 21:27:56] 2025-05-08 19:27:34,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-08 21:27:56] 2025-05-08 19:27:35,229 | INFO     | 5190s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-08 21:27:56] 2025-05-08 19:27:36,802 | INFO     | monitor loop #401: job 0:6637939696 is in state 'finished'
[2025-05-08 21:27:56] 2025-05-08 19:27:36,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-08 21:27:56] 2025-05-08 19:27:37,829 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-08 21:27:56] 2025-05-08 19:27:37,830 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6637939696/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 21:27:56] 2025-05-08 19:27:37,830 | INFO     | extracted standard info from prmon json
[2025-05-08 21:27:56] 2025-05-08 19:27:37,830 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 21:27:56] 2025-05-08 19:27:37,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 21:27:56] 2025-05-08 19:27:37,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 21:27:56] 2025-05-08 19:27:37,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 21:27:56] 2025-05-08 19:27:37,831 | INFO     | fitting pss+swap vs Time
[2025-05-08 21:27:56] 2025-05-08 19:27:37,831 | INFO     | sum of square deviations: 147126479.5
[2025-05-08 21:27:56] 2025-05-08 19:27:37,831 | INFO     | sum of deviations: 16599177565.0
[2025-05-08 21:27:56] 2025-05-08 19:27:37,831 | INFO     | mean x: 1746729943.5
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | mean y: 2313617.5384615385
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | -- intersect: -197068129369.9791
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | intersect: -197068129369.9791
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | chi2: 1.5133162426949684
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | -- intersect: -197068129369.9791
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | current memory leak: 112.82 B/s (using 78 data points, chi2=1.51)
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | ..............................
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . Timing measurements:
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . get job = 0 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . initial setup = 1 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . payload setup = 4 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . stage-in = 0 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . payload execution = 5163 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . stage-out = 0 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | . log creation = 0 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,832 | INFO     | ..............................
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | 
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | job summary report
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | --------------------------------------------------
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | PanDA job id: 6637939696
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | task id: 44506063
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | errors: (none)
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | pilot state: finished 
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | transexitcode: 0
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | exeerrorcode: 0
[2025-05-08 21:27:56] 2025-05-08 19:27:37,873 | INFO     | exeerrordiag: 
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | exitcode: 0
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | exitmsg: OK
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | cpuconsumptiontime: 18019 s
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | nevents: 400
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | neventsw: 0
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | pid: 1539667
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | pgrp: 1539667
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | corecount: 4
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | event service: False
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | sizes: {0: 2393741, 4: 2393947, 11: 2393975, 5171: 2429390, 5177: 2429504}
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | --------------------------------------------------
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | 
[2025-05-08 21:27:56] 2025-05-08 19:27:37,874 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 21:27:56] 2025-05-08 19:27:37,893 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,893 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,893 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,893 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | job 6637939696 has completed (purged errors)
[2025-05-08 21:27:56] 2025-05-08 19:27:37,894 | INFO     | overall cleanup function is called
[2025-05-08 21:27:56] 2025-05-08 19:27:38,901 | INFO     | --- collectZombieJob: --- 10, [1539667]
[2025-05-08 21:27:56] 2025-05-08 19:27:38,901 | INFO     | zombie collector waiting for pid 1539667
[2025-05-08 21:27:56] 2025-05-08 19:27:38,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 21:27:56] 2025-05-08 19:27:38,902 | INFO     | collected zombie processes
[2025-05-08 21:27:56] 2025-05-08 19:27:38,902 | INFO     | will attempt to kill all subprocesses of pid=1539667
[2025-05-08 21:27:56] 2025-05-08 19:27:38,948 | INFO     | process IDs to be killed: [1539667] (in reverse order)
[2025-05-08 21:27:56] 2025-05-08 19:27:38,982 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 21:27:56] 2025-05-08 19:27:38,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 21:27:56] 2025-05-08 19:27:38,984 | INFO     | did not find any defunct processes belonging to 1539667
[2025-05-08 21:27:56] 2025-05-08 19:27:38,986 | INFO     | did not find any defunct processes belonging to 1539667
[2025-05-08 21:27:56] 2025-05-08 19:27:38,986 | INFO     | ready for new job
[2025-05-08 21:27:56] 2025-05-08 19:27:38,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 21:27:56] 2025-05-08 19:27:38,986 | INFO     | **************************************
[2025-05-08 21:27:56] 2025-05-08 19:27:38,987 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 21:27:56] 2025-05-08 19:27:38,987 | INFO     | **************************************
[2025-05-08 21:27:56] 2025-05-08 19:27:38,987 | INFO     | 
[2025-05-08 21:27:56] 2025-05-08 19:27:38,987 | INFO     | architecture information:
[2025-05-08 21:27:56] 2025-05-08 19:27:38,987 | INFO     | executing command: cat /etc/os-release
[2025-05-08 21:27:56] 2025-05-08 19:27:39,002 | INFO     | cat /etc/os-release:
[2025-05-08 21:27:56] NAME="CentOS Linux"
[2025-05-08 21:27:56] VERSION="7 (Core)"
[2025-05-08 21:27:56] ID="centos"
[2025-05-08 21:27:56] ID_LIKE="rhel fedora"
[2025-05-08 21:27:56] VERSION_ID="7"
[2025-05-08 21:27:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 21:27:56] ANSI_COLOR="0;31"
[2025-05-08 21:27:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 21:27:56] HOME_URL="https://www.centos.org/"
[2025-05-08 21:27:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 21:27:56] 
[2025-05-08 21:27:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 21:27:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 21:27:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 21:27:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 21:27:56] 
[2025-05-08 21:27:56] 2025-05-08 19:27:39,002 | INFO     | **************************************
[2025-05-08 21:27:56] 2025-05-08 19:27:39,505 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 21:27:56] 2025-05-08 19:27:39,524 | INFO     | sufficient remaining disk space (318370742272 B)
[2025-05-08 21:27:56] 2025-05-08 19:27:39,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 21:27:56] 2025-05-08 19:27:39,525 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 21:27:56] 2025-05-08 19:27:39,525 | INFO     | update_server=False
[2025-05-08 21:27:56] 2025-05-08 19:27:39,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 21:27:56] 2025-05-08 19:27:39,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 21:27:56] 2025-05-08 19:27:40,052 | INFO     | all data control threads have been joined
[2025-05-08 21:27:56] 2025-05-08 19:27:40,223 | INFO     | all payload control threads have been joined
[2025-05-08 21:27:56] 2025-05-08 19:27:40,246 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 21:27:56] 2025-05-08 19:27:40,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 21:27:56] 2025-05-08 19:27:40,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 21:27:56] 2025-05-08 19:27:40,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 21:27:56] 2025-05-08 19:27:40,312 | INFO     | aborting loop
[2025-05-08 21:27:56] 2025-05-08 19:27:40,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 21:27:56] 2025-05-08 19:27:40,530 | INFO     | [job] retrieve thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:40,531 | INFO     | [job] queue monitor thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:40,758 | INFO     | all job control threads have been joined
[2025-05-08 21:27:56] 2025-05-08 19:27:40,950 | INFO     | [payload] validate_post thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,057 | INFO     | [data] control thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,104 | INFO     | [job] validate thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,161 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,200 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,229 | INFO     | [payload] control thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,317 | INFO     | [job] job monitor thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,678 | INFO     | [payload] failed_post thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,764 | INFO     | [job] control thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,918 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:41,960 | INFO     | [data] copytool_in thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:42,393 | INFO     | [data] copytool_out thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:42,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 21:27:56] 2025-05-08 19:27:46,933 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:49,803 | INFO     | job.realtimelogging is not enabled
[2025-05-08 21:27:56] 2025-05-08 19:27:50,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 21:27:56] 2025-05-08 19:27:51,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427942692672)>', '<ExcThread(monitor, started 140427143395072)>']
[2025-05-08 21:27:56] 2025-05-08 19:27:51,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 21:27:56] 2025-05-08 19:27:51,301 | INFO     | [monitor] control thread has ended
[2025-05-08 21:27:56] 2025-05-08 19:27:56,188 | INFO     | all workflow threads have been joined
[2025-05-08 21:27:56] 2025-05-08 19:27:56,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 21:27:56] 2025-05-08 19:27:56,188 | INFO     | traces error code: 0
[2025-05-08 21:27:56] 2025-05-08 19:27:56,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 21:27:56] 2025-05-08 19:27:56,271 [wrapper] ==== pilot stdout END ====
[2025-05-08 21:27:56] 2025-05-08 19:27:56,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 21:27:56] 2025-05-08 19:27:56,280 [wrapper] pilotpid: 1533093
[2025-05-08 21:27:56] 2025-05-08 19:27:56,284 [wrapper] Pilot exit status: 0
[2025-05-08 21:27:56] 2025-05-08 19:27:56,296 [wrapper] pandaids: 6637939696
[2025-05-08 21:27:56] 2025-05-08 19:27:56,320 [wrapper] cleanup supervisor_pilot 1551785 1533094
[2025-05-08 21:27:56] 2025-05-08 19:27:56,324 [wrapper] Test setup, not cleaning
[2025-05-08 21:27:56] 2025-05-08 19:27:56,328 [wrapper] apfmon messages muted
[2025-05-08 21:27:56] 2025-05-08 19:27:56,331 [wrapper] ==== wrapper stdout END ====
[2025-05-08 21:27:56] 2025-05-08 19:27:56,335 [wrapper] ==== wrapper stderr END ====
[2025-05-08 21:27:56]  *** Error codes and diagnostics ***
[2025-05-08 21:27:56]     "exeErrorCode": 0,
[2025-05-08 21:27:56]     "exeErrorDiag": "",
[2025-05-08 21:27:56]     "pilotErrorCode": 0,
[2025-05-08 21:27:56]     "pilotErrorDiag": "",
[2025-05-08 21:27:56]  *** Listing of results directory ***
[2025-05-08 21:27:56] total 422848
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc    495897 May  8 06:45 pilot3.tar.gz
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc      5111 May  8 07:02 queuedata.json
[2025-05-08 21:27:56] -rwx------ 1 boinc boinc     37140 May  8 07:03 runpilot2-wrapper.sh
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc       100 May  8 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 21:27:56] -rwxr-xr-x 1 boinc boinc      7986 May  8 20:00 run_atlas
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc       105 May  8 20:00 job.xml
[2025-05-08 21:27:56] -rw-r--r-- 2 boinc boinc 223509208 May  8 20:00 EVNT.44506061._002105.pool.root.1
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc      6862 May  8 20:00 init_data.xml
[2025-05-08 21:27:56] drwxrwx--x 2 boinc boinc      4096 May  8 20:00 shared
[2025-05-08 21:27:56] -rw-r--r-- 2 boinc boinc    508885 May  8 20:00 input.tar.gz
[2025-05-08 21:27:56] -rw-r--r-- 2 boinc boinc     17569 May  8 20:00 start_atlas.sh
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc         0 May  8 20:00 boinc_lockfile
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc      2557 May  8 20:00 pandaJob.out
[2025-05-08 21:27:56] -rw------- 1 boinc boinc       424 May  8 20:00 setup.sh.local
[2025-05-08 21:27:56] -rw------- 1 boinc boinc    997871 May  8 20:01 agis_schedconf.cvmfs.json
[2025-05-08 21:27:56] -rw------- 1 boinc boinc   1596741 May  8 20:01 agis_ddmendpoints.agis.ALL.json
[2025-05-08 21:27:56] drwx------ 4 boinc boinc      4096 May  8 20:01 pilot3
[2025-05-08 21:27:56] -rw------- 1 boinc boinc 204125186 May  8 21:27 HITS.44506063._048914.pool.root.1
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc       529 May  8 21:27 boinc_task_state.xml
[2025-05-08 21:27:56] -rw------- 1 boinc boinc      1022 May  8 21:27 memory_monitor_summary.json
[2025-05-08 21:27:56] -rw------- 1 boinc boinc    257522 May  8 21:27 log.44506063._048914.job.log.tgz.1
[2025-05-08 21:27:56] -rw------- 1 boinc boinc        95 May  8 21:27 pilot_heartbeat.json
[2025-05-08 21:27:56] -rw------- 1 boinc boinc      7664 May  8 21:27 heartbeat.json
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc      8192 May  8 21:27 boinc_mmap_file
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc        27 May  8 21:27 wrapper_checkpoint.txt
[2025-05-08 21:27:56] -rw------- 1 boinc boinc      4429 May  8 21:27 pilotlog.txt
[2025-05-08 21:27:56] -rw------- 1 boinc boinc    501829 May  8 21:27 log.44506063._048914.job.log.1
[2025-05-08 21:27:56] -rw------- 1 boinc boinc       357 May  8 21:27 output.list
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc       620 May  8 21:27 runtime_log
[2025-05-08 21:27:56] -rw------- 1 boinc boinc    778240 May  8 21:27 result.tar.gz
[2025-05-08 21:27:56] -rw------- 1 boinc boinc       660 May  8 21:27 v43LDmSb8W7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmdO8LDm6mtgLn.diag
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc     11109 May  8 21:27 runtime_log.err
[2025-05-08 21:27:56] -rw-r--r-- 1 boinc boinc     21150 May  8 21:27 stderr.txt
[2025-05-08 21:27:56] HITS file was successfully produced:
[2025-05-08 21:27:56] -rw------- 1 boinc boinc 204125186 May  8 21:27 shared/HITS.pool.root.1
[2025-05-08 21:27:56]  *** Contents of shared directory: ***
[2025-05-08 21:27:56] total 418900
[2025-05-08 21:27:56] -rw-r--r-- 2 boinc boinc 223509208 May  8 20:00 ATLAS.root_0
[2025-05-08 21:27:56] -rw-r--r-- 2 boinc boinc    508885 May  8 20:00 input.tar.gz
[2025-05-08 21:27:56] -rw-r--r-- 2 boinc boinc     17569 May  8 20:00 start_atlas.sh
[2025-05-08 21:27:56] -rw------- 1 boinc boinc 204125186 May  8 21:27 HITS.pool.root.1
[2025-05-08 21:27:56] -rw------- 1 boinc boinc    778240 May  8 21:27 result.tar.gz
21:27:58 (1529366): run_atlas exited; CPU time 18037.162017
21:27:58 (1529366): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN