Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:25:31 (104662): wrapper (7.7.26015): starting
18:25:31 (104662): wrapper: running run_atlas (--nthreads 4)
[2025-05-08 18:25:31] Arguments: --nthreads 4
[2025-05-08 18:25:31] Threads: 4
[2025-05-08 18:25:31] Checking for CVMFS
[2025-05-08 18:25:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 18:25:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 18:25:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 18:25:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 18:25:31] 2.9.2.0 3057 344 65808 145764 0 55 4948629 36864001 0 130560 0 258218 99.991 85809 60599 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 18:25:31] CVMFS is ok
[2025-05-08 18:25:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 18:25:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 18:25:31] Further information can be found at the LHC@home message board.
[2025-05-08 18:25:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 18:25:31] Checking for apptainer binary...
[2025-05-08 18:25:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 18:25:31] Running /usr/bin/apptainer --version
[2025-05-08 18:25:31] apptainer version 1.3.6-6.1
[2025-05-08 18:25:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 18:25:31] magicA250
[2025-05-08 18:25:31] apptainer works
[2025-05-08 18:25:32] Set ATHENA_PROC_NUMBER=4
[2025-05-08 18:25:32] Set ATHENA_CORE_NUMBER=4
[2025-05-08 18:25:32] Starting ATLAS job with PandaID=6637489502
[2025-05-08 18:25:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 19:51:26]  *** The last 200 lines of the pilot log: ***
[2025-05-08 19:51:26]  scope=mc23_13p6TeV
[2025-05-08 19:51:26]  status=None
[2025-05-08 19:51:26]  status_code=0
[2025-05-08 19:51:26]  storage_token=
[2025-05-08 19:51:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6637489502/log.44506063._045645.job.log.tgz.1
[2025-05-08 19:51:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/c2/log.44506063._045645.job.log.tgz.1
[2025-05-08 19:51:26]  workdir=None
[2025-05-08 19:51:26] ]
[2025-05-08 19:51:26] 2025-05-08 17:50:59,809 | INFO     | transferring file log.44506063._045645.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6637489502/log.44506063._045645.job.log.tgz.1 to /local/data/boinc/
[2025-05-08 19:51:26] 2025-05-08 17:50:59,809 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6637489502/log.44506063._045645.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0456
[2025-05-08 19:51:26] 2025-05-08 17:50:59,828 | INFO     | adding to output.list: log.44506063._045645.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/c2/log.44506063._045645.job.log.tg
[2025-05-08 19:51:26] 2025-05-08 17:50:59,829 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-08 19:51:26] 2025-05-08 17:50:59,829 | INFO     | summary of transferred files:
[2025-05-08 19:51:26] 2025-05-08 17:50:59,829 | INFO     |  -- lfn=log.44506063._045645.job.log.tgz.1, status_code=0, status=transferred
[2025-05-08 19:51:26] 2025-05-08 17:50:59,829 | INFO     | stage-out finished correctly
[2025-05-08 19:51:26] 2025-05-08 17:51:01,866 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-08 19:51:26] 2025-05-08 17:51:01,908 | INFO     | job 6637489502 has state=finished
[2025-05-08 19:51:26] 2025-05-08 17:51:01,908 | INFO     | preparing for final server update for job 6637489502 in state='finished'
[2025-05-08 19:51:26] 2025-05-08 17:51:01,909 | INFO     | this job has now completed (state=finished)
[2025-05-08 19:51:26] 2025-05-08 17:51:01,909 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-08 19:51:26] 2025-05-08 17:51:01,909 | INFO     | log transfer has been attempted: DONE
[2025-05-08 19:51:26] 2025-05-08 17:51:01,909 | INFO     | job 6637489502 has finished - writing final server update
[2025-05-08 19:51:26] 2025-05-08 17:51:01,909 | INFO     | total number of processed events: 400 (read)
[2025-05-08 19:51:26] 2025-05-08 17:51:01,910 | INFO     | executing command: lscpu
[2025-05-08 19:51:26] 2025-05-08 17:51:01,930 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-08 19:51:26] 2025-05-08 17:51:04,888 | WARNING  | process 114965 can no longer be monitored (due to stat problems) - aborting
[2025-05-08 19:51:26] 2025-05-08 17:51:04,889 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6637489502/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 19:51:26] 2025-05-08 17:51:04,889 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6637489502/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 19:51:26] 2025-05-08 17:51:04,890 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2478506 B
[2025-05-08 19:51:26] 2025-05-08 17:51:04,890 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15637 B
[2025-05-08 19:51:26] 2025-05-08 17:51:04,890 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,852 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-08 19:51:26] 2025-05-08 17:51:06,856 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6637489502/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,857 | INFO     | extracted standard info from prmon json
[2025-05-08 19:51:26] 2025-05-08 17:51:06,857 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 19:51:26] 2025-05-08 17:51:06,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 19:51:26] 2025-05-08 17:51:06,858 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 19:51:26] 2025-05-08 17:51:06,858 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | fitting pss+swap vs Time
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | sum of square deviations: 141539398.0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | sum of deviations: 5246747189.000004
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | mean x: 1746724186.0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | mean y: 2572448.337662338
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | -- intersect: -64747033261.11873
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | intersect: -64747033261.11873
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | chi2: 1.608880983189921
[2025-05-08 19:51:26] 2025-05-08 17:51:06,859 | INFO     | -- intersect: -64747033261.11873
[2025-05-08 19:51:26] 2025-05-08 17:51:06,860 | INFO     | current memory leak: 37.07 B/s (using 77 data points, chi2=1.61)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | ..............................
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . Timing measurements:
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . get job = 0 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . initial setup = 1 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . payload setup = 4 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . stage-in = 0 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . payload execution = 5097 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . stage-out = 0 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | . log creation = 0 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,861 | INFO     | ..............................
[2025-05-08 19:51:26] 2025-05-08 17:51:06,888 | INFO     | sufficient remaining disk space (355013230592 B)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,898 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,904 | INFO     | 
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | job summary report
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | --------------------------------------------------
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | PanDA job id: 6637489502
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | task id: 44506063
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | errors: (none)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | pilot state: finished 
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | transexitcode: 0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | exeerrorcode: 0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | exeerrordiag: 
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | exitcode: 0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | exitmsg: OK
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | cpuconsumptiontime: 17518 s
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | nevents: 400
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | neventsw: 0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | pid: 114965
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | pgrp: 114965
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | corecount: 4
[2025-05-08 19:51:26] 2025-05-08 17:51:06,905 | INFO     | event service: False
[2025-05-08 19:51:26] 2025-05-08 17:51:06,906 | INFO     | sizes: {0: 2393742, 4: 2393948, 11: 2393976, 5105: 2420320, 5106: 2429267, 5108: 2429323, 5113: 2429621}
[2025-05-08 19:51:26] 2025-05-08 17:51:06,906 | INFO     | --------------------------------------------------
[2025-05-08 19:51:26] 2025-05-08 17:51:06,906 | INFO     | 
[2025-05-08 19:51:26] 2025-05-08 17:51:06,906 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 19:51:26] 2025-05-08 17:51:06,910 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6637489502: 2777979 B (within 2537553920 B limit)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,910 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6637489502/HITS.44506063._045645.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,910 | INFO     | total size of present files: 0 B (workdir size: 2777979 B)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,910 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6637489502/HITS.44506063._045645.pool.root.1 since it does not exist
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 19:51:26] 2025-05-08 17:51:06,926 | INFO     | job 6637489502 has completed (purged errors)
[2025-05-08 19:51:26] 2025-05-08 17:51:06,926 | INFO     | overall cleanup function is called
[2025-05-08 19:51:26] 2025-05-08 17:51:06,959 | INFO     | number of running child processes to parent process 114965: 1
[2025-05-08 19:51:26] 2025-05-08 17:51:06,959 | INFO     | maximum number of monitored processes: 6
[2025-05-08 19:51:26] 2025-05-08 17:51:06,959 | INFO     | aborting job monitoring since job object (job id=6637489502) has expired
[2025-05-08 19:51:26] 2025-05-08 17:51:07,933 | INFO     | --- collectZombieJob: --- 10, [114965]
[2025-05-08 19:51:26] 2025-05-08 17:51:07,933 | INFO     | zombie collector waiting for pid 114965
[2025-05-08 19:51:26] 2025-05-08 17:51:07,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 19:51:26] 2025-05-08 17:51:07,933 | INFO     | collected zombie processes
[2025-05-08 19:51:26] 2025-05-08 17:51:07,933 | INFO     | will attempt to kill all subprocesses of pid=114965
[2025-05-08 19:51:26] 2025-05-08 17:51:07,978 | INFO     | process IDs to be killed: [114965] (in reverse order)
[2025-05-08 19:51:26] 2025-05-08 17:51:08,012 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 19:51:26] 2025-05-08 17:51:08,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 19:51:26] 2025-05-08 17:51:08,014 | INFO     | did not find any defunct processes belonging to 114965
[2025-05-08 19:51:26] 2025-05-08 17:51:08,015 | INFO     | did not find any defunct processes belonging to 114965
[2025-05-08 19:51:26] 2025-05-08 17:51:08,015 | INFO     | ready for new job
[2025-05-08 19:51:26] 2025-05-08 17:51:08,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 19:51:26] 2025-05-08 17:51:08,016 | INFO     | **************************************
[2025-05-08 19:51:26] 2025-05-08 17:51:08,016 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 19:51:26] 2025-05-08 17:51:08,016 | INFO     | **************************************
[2025-05-08 19:51:26] 2025-05-08 17:51:08,016 | INFO     | 
[2025-05-08 19:51:26] 2025-05-08 17:51:08,016 | INFO     | architecture information:
[2025-05-08 19:51:26] 2025-05-08 17:51:08,017 | INFO     | executing command: cat /etc/os-release
[2025-05-08 19:51:26] 2025-05-08 17:51:08,031 | INFO     | cat /etc/os-release:
[2025-05-08 19:51:26] NAME="CentOS Linux"
[2025-05-08 19:51:26] VERSION="7 (Core)"
[2025-05-08 19:51:26] ID="centos"
[2025-05-08 19:51:26] ID_LIKE="rhel fedora"
[2025-05-08 19:51:26] VERSION_ID="7"
[2025-05-08 19:51:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 19:51:26] ANSI_COLOR="0;31"
[2025-05-08 19:51:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 19:51:26] HOME_URL="https://www.centos.org/"
[2025-05-08 19:51:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 19:51:26] 
[2025-05-08 19:51:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 19:51:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 19:51:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 19:51:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 19:51:26] 
[2025-05-08 19:51:26] 2025-05-08 17:51:08,031 | INFO     | **************************************
[2025-05-08 19:51:26] 2025-05-08 17:51:08,534 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | INFO     | sufficient remaining disk space (355016376320 B)
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | INFO     | update_server=False
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 19:51:26] 2025-05-08 17:51:08,553 | INFO     | aborting loop
[2025-05-08 19:51:26] 2025-05-08 17:51:08,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 19:51:26] 2025-05-08 17:51:08,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 19:51:26] 2025-05-08 17:51:08,707 | INFO     | all payload control threads have been joined
[2025-05-08 19:51:26] 2025-05-08 17:51:09,021 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 19:51:26] 2025-05-08 17:51:09,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 19:51:26] 2025-05-08 17:51:09,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 19:51:26] 2025-05-08 17:51:09,112 | INFO     | all job control threads have been joined
[2025-05-08 19:51:26] 2025-05-08 17:51:09,219 | INFO     | all data control threads have been joined
[2025-05-08 19:51:26] 2025-05-08 17:51:09,559 | INFO     | [job] job monitor thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:09,559 | INFO     | [job] retrieve thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:09,559 | INFO     | [job] queue monitor thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:09,656 | INFO     | [job] validate thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:09,664 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:09,712 | INFO     | [payload] control thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:09,885 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:10,059 | INFO     | [payload] validate_post thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:10,118 | INFO     | [job] control thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:10,224 | INFO     | [data] control thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:10,511 | INFO     | [data] copytool_in thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:10,556 | INFO     | [data] copytool_out thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:10,816 | INFO     | [payload] failed_post thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:10,921 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:12,560 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:18,970 | INFO     | job.realtimelogging is not enabled
[2025-05-08 19:51:26] 2025-05-08 17:51:19,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 19:51:26] 2025-05-08 17:51:21,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080177805120)>', '<ExcThread(monitor, started 140079553050368)>']
[2025-05-08 19:51:26] 2025-05-08 17:51:22,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 19:51:26] 2025-05-08 17:51:22,090 | INFO     | [monitor] control thread has ended
[2025-05-08 19:51:26] 2025-05-08 17:51:26,311 | INFO     | all workflow threads have been joined
[2025-05-08 19:51:26] 2025-05-08 17:51:26,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 19:51:26] 2025-05-08 17:51:26,312 | INFO     | traces error code: 0
[2025-05-08 19:51:26] 2025-05-08 17:51:26,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 19:51:26] 2025-05-08 17:51:26,392 [wrapper] ==== pilot stdout END ====
[2025-05-08 19:51:26] 2025-05-08 17:51:26,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 19:51:26] 2025-05-08 17:51:26,401 [wrapper] pilotpid: 108381
[2025-05-08 19:51:26] 2025-05-08 17:51:26,405 [wrapper] Pilot exit status: 0
[2025-05-08 19:51:26] 2025-05-08 17:51:26,418 [wrapper] pandaids: 6637489502
[2025-05-08 19:51:26] 2025-05-08 17:51:26,440 [wrapper] cleanup supervisor_pilot  127421 108382
[2025-05-08 19:51:26] 2025-05-08 17:51:26,445 [wrapper] Test setup, not cleaning
[2025-05-08 19:51:26] 2025-05-08 17:51:26,449 [wrapper] apfmon messages muted
[2025-05-08 19:51:26] 2025-05-08 17:51:26,453 [wrapper] ==== wrapper stdout END ====
[2025-05-08 19:51:26] 2025-05-08 17:51:26,457 [wrapper] ==== wrapper stderr END ====
[2025-05-08 19:51:26]  *** Error codes and diagnostics ***
[2025-05-08 19:51:26]     "exeErrorCode": 0,
[2025-05-08 19:51:26]     "exeErrorDiag": "",
[2025-05-08 19:51:26]     "pilotErrorCode": 0,
[2025-05-08 19:51:26]     "pilotErrorDiag": "",
[2025-05-08 19:51:26]  *** Listing of results directory ***
[2025-05-08 19:51:26] total 415960
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc    495897 May  8 02:11 pilot3.tar.gz
[2025-05-08 19:51:26] -rwx------ 1 boinc boinc     37140 May  8 02:15 runpilot2-wrapper.sh
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc      5111 May  8 02:15 queuedata.json
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc       100 May  8 18:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 19:51:26] -rwxr-xr-x 1 boinc boinc      7986 May  8 18:25 run_atlas
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc       105 May  8 18:25 job.xml
[2025-05-08 19:51:26] -rw-r--r-- 2 boinc boinc 222283325 May  8 18:25 EVNT.44506061._001823.pool.root.1
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc      6858 May  8 18:25 init_data.xml
[2025-05-08 19:51:26] drwxrwx--x 2 boinc boinc      4096 May  8 18:25 shared
[2025-05-08 19:51:26] -rw-r--r-- 2 boinc boinc    508873 May  8 18:25 input.tar.gz
[2025-05-08 19:51:26] -rw-r--r-- 2 boinc boinc     17569 May  8 18:25 start_atlas.sh
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc         0 May  8 18:25 boinc_lockfile
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc      2558 May  8 18:25 pandaJob.out
[2025-05-08 19:51:26] -rw------- 1 boinc boinc       424 May  8 18:25 setup.sh.local
[2025-05-08 19:51:26] -rw------- 1 boinc boinc    997887 May  8 18:25 agis_schedconf.cvmfs.json
[2025-05-08 19:51:26] -rw------- 1 boinc boinc   1596741 May  8 18:25 agis_ddmendpoints.agis.ALL.json
[2025-05-08 19:51:26] drwx------ 4 boinc boinc      4096 May  8 18:25 pilot3
[2025-05-08 19:51:26] -rw------- 1 boinc boinc 198316198 May  8 19:50 HITS.44506063._045645.pool.root.1
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc       529 May  8 19:50 boinc_task_state.xml
[2025-05-08 19:51:26] -rw------- 1 boinc boinc      1038 May  8 19:50 memory_monitor_summary.json
[2025-05-08 19:51:26] -rw------- 1 boinc boinc    248578 May  8 19:50 log.44506063._045645.job.log.tgz.1
[2025-05-08 19:51:26] -rw------- 1 boinc boinc      7673 May  8 19:51 heartbeat.json
[2025-05-08 19:51:26] -rw------- 1 boinc boinc        95 May  8 19:51 pilot_heartbeat.json
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc      8192 May  8 19:51 boinc_mmap_file
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc        27 May  8 19:51 wrapper_checkpoint.txt
[2025-05-08 19:51:26] -rw------- 1 boinc boinc      4429 May  8 19:51 pilotlog.txt
[2025-05-08 19:51:26] -rw------- 1 boinc boinc    496168 May  8 19:51 log.44506063._045645.job.log.1
[2025-05-08 19:51:26] -rw------- 1 boinc boinc       357 May  8 19:51 output.list
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc       620 May  8 19:51 runtime_log
[2025-05-08 19:51:26] -rw------- 1 boinc boinc    768000 May  8 19:51 result.tar.gz
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc     11114 May  8 19:51 runtime_log.err
[2025-05-08 19:51:26] -rw------- 1 boinc boinc       661 May  8 19:51 SmjKDmB63W7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmyr7LDm14oolm.diag
[2025-05-08 19:51:26] -rw-r--r-- 1 boinc boinc     22102 May  8 19:51 stderr.txt
[2025-05-08 19:51:26] HITS file was successfully produced:
[2025-05-08 19:51:26] -rw------- 1 boinc boinc 198316198 May  8 19:50 shared/HITS.pool.root.1
[2025-05-08 19:51:26]  *** Contents of shared directory: ***
[2025-05-08 19:51:26] total 412024
[2025-05-08 19:51:26] -rw-r--r-- 2 boinc boinc 222283325 May  8 18:25 ATLAS.root_0
[2025-05-08 19:51:26] -rw-r--r-- 2 boinc boinc    508873 May  8 18:25 input.tar.gz
[2025-05-08 19:51:26] -rw-r--r-- 2 boinc boinc     17569 May  8 18:25 start_atlas.sh
[2025-05-08 19:51:26] -rw------- 1 boinc boinc 198316198 May  8 19:50 HITS.pool.root.1
[2025-05-08 19:51:26] -rw------- 1 boinc boinc    768000 May  8 19:51 result.tar.gz
19:51:27 (104662): run_atlas exited; CPU time 17531.835954
19:51:27 (104662): called boinc_finish(0)

</stderr_txt>
]]>

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