Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:11 (6542): wrapper (7.7.26015): starting
15:31:11 (6542): wrapper: running run_atlas (--nthreads 8)
[2025-05-08 15:31:11] Arguments: --nthreads 8
[2025-05-08 15:31:11] Threads: 8
[2025-05-08 15:31:11] Checking for CVMFS
[2025-05-08 15:31:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 15:31:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 15:31:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 15:31:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 15:31:11] 2.11.2.0 29279 4711 83812 145755 0 58 23536145 25165825 1011 130560 0 1646935 99.515 1546272 1623 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-08 15:31:11] CVMFS is ok
[2025-05-08 15:31:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 15:31:11] Checking for apptainer binary...
[2025-05-08 15:31:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 15:31:11] Running /usr/bin/apptainer --version
[2025-05-08 15:31:11] apptainer version 1.3.2-1.el7
[2025-05-08 15:31:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 15:31:12] cg-vwn382.simple-grid.lan
[2025-05-08 15:31:12] apptainer works
[2025-05-08 15:31:12] Set ATHENA_PROC_NUMBER=8
[2025-05-08 15:31:12] Set ATHENA_CORE_NUMBER=8
[2025-05-08 15:31:12] Starting ATLAS job with PandaID=6637473798
[2025-05-08 15:31:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 22:18:21]  *** The last 200 lines of the pilot log: ***
[2025-05-08 22:18:21] 2025-05-08 17:33:15,956 | INFO     | mean y: 2426183.7584745763
[2025-05-08 22:18:21] 2025-05-08 17:33:15,956 | INFO     | -- intersect: -44828217201.58927
[2025-05-08 22:18:21] 2025-05-08 17:33:15,956 | INFO     | intersect: -44828217201.58927
[2025-05-08 22:18:21] 2025-05-08 17:33:15,957 | INFO     | chi2: 5.731070031930373
[2025-05-08 22:18:21] 2025-05-08 17:33:15,957 | INFO     | sum of square deviations: 3822136780.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,959 | INFO     | sum of deviations: 117763760145.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,959 | INFO     | mean x: 1746718134.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,960 | INFO     | mean y: 2433934.7316017314
[2025-05-08 22:18:21] 2025-05-08 17:33:15,960 | INFO     | -- intersect: -53815654536.00543
[2025-05-08 22:18:21] 2025-05-08 17:33:15,960 | INFO     | intersect: -53815654536.00543
[2025-05-08 22:18:21] 2025-05-08 17:33:15,960 | INFO     | chi2: 4.984382260759985
[2025-05-08 22:18:21] 2025-05-08 17:33:15,960 | INFO     | current chi2=4.984382260759985 (change=13.028767176290879 %)
[2025-05-08 22:18:21] 2025-05-08 17:33:15,960 | INFO     | right removable region: 230
[2025-05-08 22:18:21] 2025-05-08 17:33:15,961 | INFO     | sum of square deviations: 3822136780.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,966 | INFO     | sum of deviations: 46843679675.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,966 | INFO     | mean x: 1746718439.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,966 | INFO     | mean y: 2460820.4632034632
[2025-05-08 22:18:21] 2025-05-08 17:33:15,966 | INFO     | -- intersect: -21405124451.493504
[2025-05-08 22:18:21] 2025-05-08 17:33:15,967 | INFO     | intersect: -21405124451.493504
[2025-05-08 22:18:21] 2025-05-08 17:33:15,967 | INFO     | chi2: 3.190168903422977
[2025-05-08 22:18:21] 2025-05-08 17:33:15,967 | INFO     | current chi2=3.190168903422977 (change=44.33554492181898 %)
[2025-05-08 22:18:21] 2025-05-08 17:33:15,968 | INFO     | sum of square deviations: 3579276412.5
[2025-05-08 22:18:21] 2025-05-08 17:33:15,969 | INFO     | sum of deviations: -4621256300.000021
[2025-05-08 22:18:21] 2025-05-08 17:33:15,970 | INFO     | mean x: 1746718591.5
[2025-05-08 22:18:21] 2025-05-08 17:33:15,970 | INFO     | mean y: 2493138.902654867
[2025-05-08 22:18:21] 2025-05-08 17:33:15,970 | INFO     | -- intersect: 2257707144.4782968
[2025-05-08 22:18:21] 2025-05-08 17:33:15,970 | INFO     | intersect: 2257707144.4782968
[2025-05-08 22:18:21] 2025-05-08 17:33:15,970 | INFO     | chi2: 1.3501321203755574
[2025-05-08 22:18:21] 2025-05-08 17:33:15,970 | INFO     | current chi2=1.3501321203755574 (change=57.678349916617364 %)
[2025-05-08 22:18:21] 2025-05-08 17:33:15,974 | INFO     | sum of square deviations: 3346927870.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,976 | INFO     | sum of deviations: -27849181133.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,976 | INFO     | mean x: 1746718744.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,976 | INFO     | mean y: 2508273.488687783
[2025-05-08 22:18:21] 2025-05-08 17:33:15,976 | INFO     | -- intersect: 14536638849.19848
[2025-05-08 22:18:21] 2025-05-08 17:33:15,976 | INFO     | intersect: 14536638849.19848
[2025-05-08 22:18:21] 2025-05-08 17:33:15,977 | INFO     | chi2: 0.8160251428360049
[2025-05-08 22:18:21] 2025-05-08 17:33:15,977 | INFO     | current chi2=0.8160251428360049 (change=39.55960823974645 %)
[2025-05-08 22:18:21] 2025-05-08 17:33:15,977 | INFO     | sum of square deviations: 3124858590.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,979 | INFO     | sum of deviations: -27913151528.0
[2025-05-08 22:18:21] 2025-05-08 17:33:15,979 | INFO     | mean x: 1746718896.5
[2025-05-08 22:18:21] 2025-05-08 17:33:15,979 | INFO     | mean y: 2508305.064814815
[2025-05-08 22:18:21] 2025-05-08 17:33:15,979 | INFO     | -- intersect: 15605271703.976074
[2025-05-08 22:18:21] 2025-05-08 17:33:15,979 | INFO     | intersect: 15605271703.976074
[2025-05-08 22:18:21] 2025-05-08 17:33:15,980 | INFO     | chi2: 0.8134526523014309
[2025-05-08 22:18:21] 2025-05-08 17:33:15,980 | INFO     | current chi2=0.8134526523014309 (change=0.3152464794937045 %)
[2025-05-08 22:18:21] 2025-05-08 17:33:15,980 | INFO     | left removable region: 40
[2025-05-08 22:18:21] 2025-05-08 17:33:15,980 | INFO     | sum of square deviations: 2126802667.5
[2025-05-08 22:18:21] 2025-05-08 17:33:15,982 | INFO     | sum of deviations: -5626186952.999999
[2025-05-08 22:18:21] 2025-05-08 17:33:15,982 | INFO     | mean x: 1746719323.5
[2025-05-08 22:18:21] 2025-05-08 17:33:15,982 | INFO     | mean y: 2512628.7789473683
[2025-05-08 22:18:21] 2025-05-08 17:33:15,982 | INFO     | -- intersect: 4623237258.57288
[2025-05-08 22:18:21] 2025-05-08 17:33:15,982 | INFO     | intersect: 4623237258.57288
[2025-05-08 22:18:21] 2025-05-08 17:33:15,983 | INFO     | chi2: 0.018010059181202905
[2025-05-08 22:18:21] 2025-05-08 17:33:15,983 | INFO     | -- intersect: 4623237258.57288
[2025-05-08 22:18:21] 2025-05-08 17:33:15,983 | INFO     | current memory leak: -2.65 B/s (using 190 data points, chi2=0.02)
[2025-05-08 22:18:21] 2025-05-08 17:33:15,991 | INFO     | ..............................
[2025-05-08 22:18:21] 2025-05-08 17:33:15,991 | INFO     | . Timing measurements:
[2025-05-08 22:18:21] 2025-05-08 17:33:15,991 | INFO     | . get job = 0 s
[2025-05-08 22:18:21] 2025-05-08 17:33:15,991 | INFO     | . initial setup = 2 s
[2025-05-08 22:18:21] 2025-05-08 17:33:15,992 | INFO     | . payload setup = 7 s
[2025-05-08 22:18:21] 2025-05-08 17:33:15,992 | INFO     | . stage-in = 0 s
[2025-05-08 22:18:21] 2025-05-08 17:33:15,992 | INFO     | . payload execution = 14365 s
[2025-05-08 22:18:21] 2025-05-08 17:33:15,992 | INFO     | . stage-out = 4 s
[2025-05-08 22:18:21] 2025-05-08 17:33:15,992 | INFO     | . log creation = 1 s
[2025-05-08 22:18:21] 2025-05-08 17:33:15,992 | INFO     | ..............................
[2025-05-08 22:18:21] 2025-05-08 17:33:16,140 | INFO     | 
[2025-05-08 22:18:21] 2025-05-08 17:33:16,140 | INFO     | job summary report
[2025-05-08 22:18:21] 2025-05-08 17:33:16,140 | INFO     | --------------------------------------------------
[2025-05-08 22:18:21] 2025-05-08 17:33:16,140 | INFO     | PanDA job id: 6637473798
[2025-05-08 22:18:21] 2025-05-08 17:33:16,140 | INFO     | task id: 44506063
[2025-05-08 22:18:21] 2025-05-08 17:33:16,140 | INFO     | errors: (none)
[2025-05-08 22:18:21] 2025-05-08 17:33:16,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | pilot state: finished 
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | transexitcode: 0
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | exeerrorcode: 0
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | exeerrordiag: 
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | exitcode: 0
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | exitmsg: OK
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | cpuconsumptiontime: 61411 s
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | nevents: 400
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | neventsw: 0
[2025-05-08 22:18:21] 2025-05-08 17:33:16,141 | INFO     | pid: 16855
[2025-05-08 22:18:21] 2025-05-08 17:33:16,142 | INFO     | pgrp: 16855
[2025-05-08 22:18:21] 2025-05-08 17:33:16,142 | INFO     | corecount: 8
[2025-05-08 22:18:21] 2025-05-08 17:33:16,142 | INFO     | event service: False
[2025-05-08 22:18:21] 2025-05-08 17:33:16,142 | INFO     | sizes: {0: 2393739, 6: 2393945, 11: 2393973, 14377: 2423977, 14378: 2423976, 14382: 2432975, 14384: 2433187, 14492: 2433357}
[2025-05-08 22:18:21] 2025-05-08 17:33:16,142 | INFO     | --------------------------------------------------
[2025-05-08 22:18:21] 2025-05-08 17:33:16,142 | INFO     | 
[2025-05-08 22:18:21] 2025-05-08 17:33:16,142 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-05-08 22:18:21] 2025-05-08 17:33:16,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 22:18:21] 2025-05-08 17:33:16,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 22:18:21] 2025-05-08 17:33:16,727 | INFO     | job 6637473798 has completed (purged errors)
[2025-05-08 22:18:21] 2025-05-08 17:33:16,727 | INFO     | overall cleanup function is called
[2025-05-08 22:18:21] 2025-05-08 17:33:17,736 | INFO     | --- collectZombieJob: --- 10, [16855]
[2025-05-08 22:18:21] 2025-05-08 17:33:17,736 | INFO     | zombie collector waiting for pid 16855
[2025-05-08 22:18:21] 2025-05-08 17:33:17,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 22:18:21] 2025-05-08 17:33:17,736 | INFO     | collected zombie processes
[2025-05-08 22:18:21] 2025-05-08 17:33:17,736 | INFO     | will attempt to kill all subprocesses of pid=16855
[2025-05-08 22:18:21] 2025-05-08 17:33:17,819 | INFO     | process IDs to be killed: [16855] (in reverse order)
[2025-05-08 22:18:21] 2025-05-08 17:33:18,251 | INFO     | PID=10438 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-08 22:18:21] 2025-05-08 17:33:18,252 | INFO     | .. there are 2 such processes running
[2025-05-08 22:18:21] 2025-05-08 17:33:18,854 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 22:18:21] 2025-05-08 17:33:18,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 22:18:21] 2025-05-08 17:33:18,857 | INFO     | did not find any defunct processes belonging to 16855
[2025-05-08 22:18:21] 2025-05-08 17:33:18,859 | INFO     | did not find any defunct processes belonging to 16855
[2025-05-08 22:18:21] 2025-05-08 17:33:18,859 | INFO     | ready for new job
[2025-05-08 22:18:21] 2025-05-08 17:33:18,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 22:18:21] 2025-05-08 17:33:18,861 | INFO     | **************************************
[2025-05-08 22:18:21] 2025-05-08 17:33:18,861 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 22:18:21] 2025-05-08 17:33:18,861 | INFO     | **************************************
[2025-05-08 22:18:21] 2025-05-08 17:33:18,861 | INFO     | 
[2025-05-08 22:18:21] 2025-05-08 17:33:18,862 | INFO     | pilot is running in a VM
[2025-05-08 22:18:21] 2025-05-08 17:33:18,862 | INFO     | architecture information:
[2025-05-08 22:18:21] 2025-05-08 17:33:18,885 | INFO     | executing command: cat /etc/os-release
[2025-05-08 22:18:21] 2025-05-08 17:33:19,205 | INFO     | cat /etc/os-release:
[2025-05-08 22:18:21] NAME="CentOS Linux"
[2025-05-08 22:18:21] VERSION="7 (Core)"
[2025-05-08 22:18:21] ID="centos"
[2025-05-08 22:18:21] ID_LIKE="rhel fedora"
[2025-05-08 22:18:21] VERSION_ID="7"
[2025-05-08 22:18:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 22:18:21] ANSI_COLOR="0;31"
[2025-05-08 22:18:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 22:18:21] HOME_URL="https://www.centos.org/"
[2025-05-08 22:18:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 22:18:21] 
[2025-05-08 22:18:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 22:18:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 22:18:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 22:18:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 22:18:21] 
[2025-05-08 22:18:21] 2025-05-08 17:33:19,206 | INFO     | **************************************
[2025-05-08 22:18:21] 2025-05-08 17:33:19,709 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-05-08 22:18:21] 2025-05-08 17:33:19,900 | INFO     | sufficient remaining disk space (496501784576 B)
[2025-05-08 22:18:21] 2025-05-08 17:33:19,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 22:18:21] 2025-05-08 17:33:19,901 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 22:18:21] 2025-05-08 17:33:19,901 | INFO     | update_server=False
[2025-05-08 22:18:21] 2025-05-08 17:33:19,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 22:18:21] 2025-05-08 17:33:19,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 22:18:21] 2025-05-08 17:33:20,258 | INFO     | all data control threads have been joined
[2025-05-08 22:18:21] 2025-05-08 17:33:20,259 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 22:18:21] 2025-05-08 17:33:20,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 22:18:21] 2025-05-08 17:33:20,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 22:18:21] 2025-05-08 17:33:20,272 | INFO     | all job control threads have been joined
[2025-05-08 22:18:21] 2025-05-08 17:33:20,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 22:18:21] 2025-05-08 17:33:20,436 | INFO     | aborting loop
[2025-05-08 22:18:21] 2025-05-08 17:33:20,907 | INFO     | [job] retrieve thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:20,958 | INFO     | all payload control threads have been joined
[2025-05-08 22:18:21] 2025-05-08 17:33:21,002 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,028 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,125 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 22:18:21] 2025-05-08 17:33:21,264 | INFO     | [data] control thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,277 | INFO     | [job] control thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,381 | INFO     | [data] copytool_in thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,442 | INFO     | [job] job monitor thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,451 | INFO     | [job] validate thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,725 | INFO     | [payload] failed_post thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,810 | INFO     | [payload] validate_post thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,909 | INFO     | [data] copytool_out thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:21,964 | INFO     | [payload] control thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:22,080 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:22,153 | INFO     | [job] queue monitor thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:22,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 22:18:21] 2025-05-08 17:33:26,582 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 22:18:21] 2025-05-08 17:33:28,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139931863828288)>', '<ExcThread(monitor, started 139931284391680)>']
[2025-05-08 22:18:21] 2025-05-08 17:33:29,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 22:18:21] 2025-05-08 17:33:29,313 | INFO     | [monitor] control thread has ended
[2025-05-08 22:18:21] 2025-05-08 17:33:33,558 | INFO     | all workflow threads have been joined
[2025-05-08 22:18:21] 2025-05-08 17:33:33,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 22:18:21] 2025-05-08 17:33:33,558 | INFO     | traces error code: 0
[2025-05-08 22:18:21] 2025-05-08 17:33:33,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 22:18:21] 2025-05-08 17:33:33,932 [wrapper] ==== pilot stdout END ====
[2025-05-08 22:18:21] 2025-05-08 17:33:34,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 22:18:21] 2025-05-08 17:33:34,144 [wrapper] pilotpid: 10438
[2025-05-08 22:18:21] 2025-05-08 17:33:34,261 [wrapper] Pilot exit status: 0
[2025-05-08 22:18:21] 2025-05-08 17:33:34,702 [wrapper] pandaids: 6637473798
[2025-05-08 22:18:21] 2025-05-08 17:33:35,311 [wrapper] cleanup supervisor_pilot 16463 10439
[2025-05-08 22:18:21] 2025-05-08 17:33:35,427 [wrapper] Test setup, not cleaning
[2025-05-08 22:18:21] 2025-05-08 17:33:35,530 [wrapper] apfmon messages muted
[2025-05-08 22:18:21] 2025-05-08 17:33:35,669 [wrapper] ==== wrapper stdout END ====
[2025-05-08 22:18:21] 2025-05-08 17:33:35,785 [wrapper] ==== wrapper stderr END ====
[2025-05-08 22:18:21]  *** Error codes and diagnostics ***
[2025-05-08 22:18:21]     "exeErrorCode": 0,
[2025-05-08 22:18:21]     "exeErrorDiag": "",
[2025-05-08 22:18:21]     "pilotErrorCode": 0,
[2025-05-08 22:18:21]     "pilotErrorDiag": "",
[2025-05-08 22:18:21]  *** Listing of results directory ***
[2025-05-08 22:18:21] total 418524
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc    495897 May  7 22:43 pilot3.tar.gz
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc      5111 May  7 22:59 queuedata.json
[2025-05-08 22:18:21] -rwx------. 1 boinc boinc     37140 May  7 23:01 runpilot2-wrapper.sh
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc       100 May  8 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 22:18:21] -rwxr-xr-x. 1 boinc boinc      7986 May  8 15:31 run_atlas
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc       105 May  8 15:31 job.xml
[2025-05-08 22:18:21] -rw-r--r--. 2 boinc boinc 221691390 May  8 15:31 EVNT.44506061._001726.pool.root.1
[2025-05-08 22:18:21] -rw-r--r--. 2 boinc boinc     17569 May  8 15:31 start_atlas.sh
[2025-05-08 22:18:21] drwxrwx--x. 2 boinc boinc        68 May  8 15:31 shared
[2025-05-08 22:18:21] -rw-r--r--. 2 boinc boinc    508879 May  8 15:31 input.tar.gz
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc      6371 May  8 15:31 init_data.xml
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc         0 May  8 15:31 boinc_lockfile
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc      2557 May  8 15:31 pandaJob.out
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc       424 May  8 15:31 setup.sh.local
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc    996860 May  8 15:31 agis_schedconf.cvmfs.json
[2025-05-08 22:18:21] drwx------. 4 boinc boinc      4096 May  8 15:31 pilot3
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc 199729714 May  8 19:29 HITS.44506063._043569.pool.root.1
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc       531 May  8 19:30 boinc_task_state.xml
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc      1021 May  8 19:31 memory_monitor_summary.json
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc   1596741 May  8 19:31 agis_ddmendpoints.agis.ALL.json
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc    393186 May  8 19:31 log.44506063._043569.job.log.tgz.1
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc        95 May  8 19:33 pilot_heartbeat.json
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc      7695 May  8 19:33 heartbeat.json
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc      4417 May  8 19:33 pilotlog.txt
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc   1262676 May  8 19:33 log.44506063._043569.job.log.1
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc       357 May  8 19:33 output.list
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc       620 May  8 19:33 runtime_log
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc   1679360 May  8 19:33 result.tar.gz
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc       657 May  8 19:33 tmiKDma40W7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4W7LDmNRjAMo.diag
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc     11031 May  8 19:33 runtime_log.err
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc      8192 May  8 22:18 boinc_mmap_file
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc        28 May  8 22:18 wrapper_checkpoint.txt
[2025-05-08 22:18:21] -rw-r--r--. 1 boinc boinc     20513 May  8 22:18 stderr.txt
[2025-05-08 22:18:21] HITS file was successfully produced:
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc 199729714 May  8 19:29 shared/HITS.pool.root.1
[2025-05-08 22:18:21]  *** Contents of shared directory: ***
[2025-05-08 22:18:21] total 413708
[2025-05-08 22:18:21] -rw-r--r--. 2 boinc boinc 221691390 May  8 15:31 ATLAS.root_0
[2025-05-08 22:18:21] -rw-r--r--. 2 boinc boinc     17569 May  8 15:31 start_atlas.sh
[2025-05-08 22:18:21] -rw-r--r--. 2 boinc boinc    508879 May  8 15:31 input.tar.gz
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc 199729714 May  8 19:29 HITS.pool.root.1
[2025-05-08 22:18:21] -rw-------. 1 boinc boinc   1679360 May  8 19:33 result.tar.gz
22:18:23 (6542): run_atlas exited; CPU time 61524.908443
22:18:23 (6542): called boinc_finish(0)

</stderr_txt>
]]>

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