Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:22 (18507): wrapper (7.7.26015): starting
18:49:22 (18507): wrapper: running run_atlas (--nthreads 10)
[2025-05-07 18:49:22] Arguments: --nthreads 10
[2025-05-07 18:49:22] Threads: 10
[2025-05-07 18:49:22] Checking for CVMFS
[2025-05-07 18:49:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 18:49:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 18:49:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 18:49:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 18:49:23] 2.11.2.0 9271 68927 380348 145728 0 437 15653311 18432000 22176 130560 0 229391598 98.996 550774231 35492 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-07 18:49:23] CVMFS is ok
[2025-05-07 18:49:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-07 18:49:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-07 18:49:23] Further information can be found at the LHC@home message board.
[2025-05-07 18:49:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 18:49:23] Checking for apptainer binary...
[2025-05-07 18:49:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 18:49:23] Running /usr/bin/apptainer --version
[2025-05-07 18:49:23] apptainer version 1.3.2-1.el7
[2025-05-07 18:49:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 18:49:28] c-211-18.aglt2.org
[2025-05-07 18:49:28] apptainer works
[2025-05-07 18:49:28] Set ATHENA_PROC_NUMBER=10
[2025-05-07 18:49:28] Set ATHENA_CORE_NUMBER=10
[2025-05-07 18:49:28] Starting ATLAS job with PandaID=6637467546
[2025-05-07 18:49:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:10:01 (26952): wrapper (7.7.26015): starting
21:10:01 (26952): wrapper: running run_atlas (--nthreads 10)
[2025-05-07 21:10:01] Arguments: --nthreads 10
[2025-05-07 21:10:01] Threads: 10
[2025-05-07 21:10:01] This job has been restarted, cleaning up previous attempt
[2025-05-07 21:10:01] Checking for CVMFS
[2025-05-07 21:10:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 21:10:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 21:10:02] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 21:10:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 21:10:03] 2.11.2.0 9271 69067 384008 145730 0 490 13020239 18432001 22931 130560 0 232987133 99.005 552368398 35499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-07 21:10:03] CVMFS is ok
[2025-05-07 21:10:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-07 21:10:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-07 21:10:03] Further information can be found at the LHC@home message board.
[2025-05-07 21:10:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 21:10:03] Checking for apptainer binary...
[2025-05-07 21:10:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 21:10:03] Running /usr/bin/apptainer --version
[2025-05-07 21:10:03] apptainer version 1.3.2-1.el7
[2025-05-07 21:10:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 21:10:10] c-211-18.aglt2.org
[2025-05-07 21:10:10] apptainer works
[2025-05-07 21:10:10] Set ATHENA_PROC_NUMBER=10
[2025-05-07 21:10:10] Set ATHENA_CORE_NUMBER=10
[2025-05-07 21:10:10] Starting ATLAS job with PandaID=6637467546
[2025-05-07 21:10:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 06:44:33]  *** The last 200 lines of the pilot log: ***
[2025-05-08 06:44:33] 2025-05-08 10:44:14,439 | INFO     | sum of square deviations: 53874895944.80475
[2025-05-08 06:44:33] 2025-05-08 10:44:14,447 | INFO     | sum of deviations: 352490945199.3394
[2025-05-08 06:44:33] 2025-05-08 10:44:14,448 | INFO     | mean x: 1746683993.8405018
[2025-05-08 06:44:33] 2025-05-08 10:44:14,448 | INFO     | mean y: 2549779.790322581
[2025-05-08 06:44:33] 2025-05-08 10:44:14,448 | INFO     | -- intersect: -11425598361.491938
[2025-05-08 06:44:33] 2025-05-08 10:44:14,448 | INFO     | intersect: -11425598361.491938
[2025-05-08 06:44:33] 2025-05-08 10:44:14,449 | INFO     | chi2: 3.454240138924899
[2025-05-08 06:44:33] 2025-05-08 10:44:14,449 | INFO     | current chi2=3.454240138924899 (change=48.642471218994466 %)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,450 | INFO     | sum of square deviations: 52439545966.719696
[2025-05-08 06:44:33] 2025-05-08 10:44:14,458 | INFO     | sum of deviations: 218691801664.50827
[2025-05-08 06:44:33] 2025-05-08 10:44:14,459 | INFO     | mean x: 1746684146.3435805
[2025-05-08 06:44:33] 2025-05-08 10:44:14,459 | INFO     | mean y: 2563994.0867992765
[2025-05-08 06:44:33] 2025-05-08 10:44:14,459 | INFO     | -- intersect: -7281738260.267863
[2025-05-08 06:44:33] 2025-05-08 10:44:14,459 | INFO     | intersect: -7281738260.267863
[2025-05-08 06:44:33] 2025-05-08 10:44:14,460 | INFO     | chi2: 1.5353391317052976
[2025-05-08 06:44:33] 2025-05-08 10:44:14,460 | INFO     | current chi2=1.5353391317052976 (change=55.55204415570372 %)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,461 | INFO     | sum of square deviations: 51029917401.12415
[2025-05-08 06:44:33] 2025-05-08 10:44:14,469 | INFO     | sum of deviations: 112108081297.23358
[2025-05-08 06:44:33] 2025-05-08 10:44:14,470 | INFO     | mean x: 1746684298.8467152
[2025-05-08 06:44:33] 2025-05-08 10:44:14,470 | INFO     | mean y: 2575511.4908759124
[2025-05-08 06:44:33] 2025-05-08 10:44:14,470 | INFO     | -- intersect: -3834730824.642744
[2025-05-08 06:44:33] 2025-05-08 10:44:14,470 | INFO     | intersect: -3834730824.642744
[2025-05-08 06:44:33] 2025-05-08 10:44:14,471 | INFO     | chi2: 0.2509882824654041
[2025-05-08 06:44:33] 2025-05-08 10:44:14,471 | INFO     | current chi2=0.2509882824654041 (change=83.65258350533722 %)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,472 | INFO     | sum of square deviations: 49645777685.517456
[2025-05-08 06:44:33] 2025-05-08 10:44:14,480 | INFO     | sum of deviations: 70978044892.33882
[2025-05-08 06:44:33] 2025-05-08 10:44:14,480 | INFO     | mean x: 1746684451.3499079
[2025-05-08 06:44:33] 2025-05-08 10:44:14,481 | INFO     | mean y: 2580038.777163904
[2025-05-08 06:44:33] 2025-05-08 10:44:14,481 | INFO     | -- intersect: -2494636304.2922287
[2025-05-08 06:44:33] 2025-05-08 10:44:14,481 | INFO     | intersect: -2494636304.2922287
[2025-05-08 06:44:33] 2025-05-08 10:44:14,482 | INFO     | chi2: 0.07477824510265382
[2025-05-08 06:44:33] 2025-05-08 10:44:14,482 | INFO     | current chi2=0.07477824510265382 (change=70.20647961405882 %)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,483 | INFO     | sum of square deviations: 48286894257.3995
[2025-05-08 06:44:33] 2025-05-08 10:44:14,491 | INFO     | sum of deviations: 48729268081.86434
[2025-05-08 06:44:33] 2025-05-08 10:44:14,492 | INFO     | mean x: 1746684603.85316
[2025-05-08 06:44:33] 2025-05-08 10:44:14,492 | INFO     | mean y: 2582528.403345725
[2025-05-08 06:44:33] 2025-05-08 10:44:14,492 | INFO     | -- intersect: -1760104089.2513535
[2025-05-08 06:44:33] 2025-05-08 10:44:14,492 | INFO     | intersect: -1760104089.2513535
[2025-05-08 06:44:33] 2025-05-08 10:44:14,493 | INFO     | chi2: 0.004055685823877468
[2025-05-08 06:44:33] 2025-05-08 10:44:14,493 | INFO     | current chi2=0.004055685823877468 (change=94.5763827189179 %)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,494 | INFO     | sum of square deviations: 46953198762.78792
[2025-05-08 06:44:33] 2025-05-08 10:44:14,502 | INFO     | sum of deviations: 45252786184.906204
[2025-05-08 06:44:33] 2025-05-08 10:44:14,503 | INFO     | mean x: 1746684756.347092
[2025-05-08 06:44:33] 2025-05-08 10:44:14,503 | INFO     | mean y: 2582925.6491557225
[2025-05-08 06:44:33] 2025-05-08 10:44:14,503 | INFO     | -- intersect: -1680845549.8150935
[2025-05-08 06:44:33] 2025-05-08 10:44:14,503 | INFO     | intersect: -1680845549.8150935
[2025-05-08 06:44:33] 2025-05-08 10:44:14,504 | INFO     | chi2: 0.003502172526226884
[2025-05-08 06:44:33] 2025-05-08 10:44:14,504 | INFO     | current chi2=0.003502172526226884 (change=13.647834711254664 %)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,504 | INFO     | left removable region: 60
[2025-05-08 06:44:33] 2025-05-08 10:44:14,505 | INFO     | sum of square deviations: 38067424158.2494
[2025-05-08 06:44:33] 2025-05-08 10:44:14,512 | INFO     | sum of deviations: 39863019479.84507
[2025-05-08 06:44:33] 2025-05-08 10:44:14,512 | INFO     | mean x: 1746685488.3581488
[2025-05-08 06:44:33] 2025-05-08 10:44:14,512 | INFO     | mean y: 2582982.3098591547
[2025-05-08 06:44:33] 2025-05-08 10:44:14,513 | INFO     | -- intersect: -1826491592.2695405
[2025-05-08 06:44:33] 2025-05-08 10:44:14,513 | INFO     | intersect: -1826491592.2695405
[2025-05-08 06:44:33] 2025-05-08 10:44:14,514 | INFO     | chi2: 0.0007315873068041479
[2025-05-08 06:44:33] 2025-05-08 10:44:14,514 | INFO     | -- intersect: -1826491592.2695405
[2025-05-08 06:44:33] 2025-05-08 10:44:14,514 | INFO     | current memory leak: 1.05 B/s (using 497 data points, chi2=0.00)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,515 | INFO     | ..............................
[2025-05-08 06:44:33] 2025-05-08 10:44:14,515 | INFO     | . Timing measurements:
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | . get job = 0 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | . initial setup = 1 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | . payload setup = 17 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | . stage-in = 0 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | . payload execution = 34349 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | . stage-out = 3 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | . log creation = 0 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,516 | INFO     | ..............................
[2025-05-08 06:44:33] 2025-05-08 10:44:14,916 | INFO     | 
[2025-05-08 06:44:33] 2025-05-08 10:44:14,916 | INFO     | job summary report
[2025-05-08 06:44:33] 2025-05-08 10:44:14,917 | INFO     | --------------------------------------------------
[2025-05-08 06:44:33] 2025-05-08 10:44:14,917 | INFO     | PanDA job id: 6637467546
[2025-05-08 06:44:33] 2025-05-08 10:44:14,917 | INFO     | task id: 44506063
[2025-05-08 06:44:33] 2025-05-08 10:44:14,917 | INFO     | errors: (none)
[2025-05-08 06:44:33] 2025-05-08 10:44:14,917 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 06:44:33] 2025-05-08 10:44:14,917 | INFO     | pilot state: finished 
[2025-05-08 06:44:33] 2025-05-08 10:44:14,917 | INFO     | transexitcode: 0
[2025-05-08 06:44:33] 2025-05-08 10:44:14,918 | INFO     | exeerrorcode: 0
[2025-05-08 06:44:33] 2025-05-08 10:44:14,918 | INFO     | exeerrordiag: 
[2025-05-08 06:44:33] 2025-05-08 10:44:14,918 | INFO     | exitcode: 0
[2025-05-08 06:44:33] 2025-05-08 10:44:14,918 | INFO     | exitmsg: OK
[2025-05-08 06:44:33] 2025-05-08 10:44:14,918 | INFO     | cpuconsumptiontime: 96946 s
[2025-05-08 06:44:33] 2025-05-08 10:44:14,918 | INFO     | nevents: 400
[2025-05-08 06:44:33] 2025-05-08 10:44:14,919 | INFO     | neventsw: 0
[2025-05-08 06:44:33] 2025-05-08 10:44:14,919 | INFO     | pid: 6092
[2025-05-08 06:44:33] 2025-05-08 10:44:14,919 | INFO     | pgrp: 6092
[2025-05-08 06:44:33] 2025-05-08 10:44:14,919 | INFO     | corecount: 10
[2025-05-08 06:44:33] 2025-05-08 10:44:14,919 | INFO     | event service: False
[2025-05-08 06:44:33] 2025-05-08 10:44:14,919 | INFO     | sizes: {0: 2393516, 1: 2393715, 11: 2393921, 12: 2393949, 34371: 2432881, 34374: 2441822, 34375: 2442006, 34397: 2442176}
[2025-05-08 06:44:33] 2025-05-08 10:44:14,919 | INFO     | --------------------------------------------------
[2025-05-08 06:44:33] 2025-05-08 10:44:14,920 | INFO     | 
[2025-05-08 06:44:33] 2025-05-08 10:44:14,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-08 06:44:33] 2025-05-08 10:44:15,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,275 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 06:44:33] 2025-05-08 10:44:15,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,303 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 06:44:33] 2025-05-08 10:44:15,303 | INFO     | job 6637467546 has completed (purged errors)
[2025-05-08 06:44:33] 2025-05-08 10:44:15,303 | INFO     | overall cleanup function is called
[2025-05-08 06:44:33] 2025-05-08 10:44:16,341 | INFO     | --- collectZombieJob: --- 10, [6092]
[2025-05-08 06:44:33] 2025-05-08 10:44:16,341 | INFO     | zombie collector waiting for pid 6092
[2025-05-08 06:44:33] 2025-05-08 10:44:16,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 06:44:33] 2025-05-08 10:44:16,361 | INFO     | collected zombie processes
[2025-05-08 06:44:33] 2025-05-08 10:44:16,361 | INFO     | will attempt to kill all subprocesses of pid=6092
[2025-05-08 06:44:33] 2025-05-08 10:44:17,846 | INFO     | process IDs to be killed: [6092] (in reverse order)
[2025-05-08 06:44:33] 2025-05-08 10:44:18,690 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 06:44:33] 2025-05-08 10:44:18,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 06:44:33] 2025-05-08 10:44:18,737 | INFO     | did not find any defunct processes belonging to 6092
[2025-05-08 06:44:33] 2025-05-08 10:44:18,756 | INFO     | did not find any defunct processes belonging to 6092
[2025-05-08 06:44:33] 2025-05-08 10:44:18,756 | INFO     | ready for new job
[2025-05-08 06:44:33] 2025-05-08 10:44:18,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 06:44:33] 2025-05-08 10:44:18,759 | INFO     | **************************************
[2025-05-08 06:44:33] 2025-05-08 10:44:18,760 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 06:44:33] 2025-05-08 10:44:18,760 | INFO     | **************************************
[2025-05-08 06:44:33] 2025-05-08 10:44:18,760 | INFO     | 
[2025-05-08 06:44:33] 2025-05-08 10:44:18,762 | INFO     | architecture information:
[2025-05-08 06:44:33] 2025-05-08 10:44:18,763 | INFO     | executing command: cat /etc/os-release
[2025-05-08 06:44:33] 2025-05-08 10:44:18,788 | INFO     | cat /etc/os-release:
[2025-05-08 06:44:33] NAME="CentOS Linux"
[2025-05-08 06:44:33] VERSION="7 (Core)"
[2025-05-08 06:44:33] ID="centos"
[2025-05-08 06:44:33] ID_LIKE="rhel fedora"
[2025-05-08 06:44:33] VERSION_ID="7"
[2025-05-08 06:44:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 06:44:33] ANSI_COLOR="0;31"
[2025-05-08 06:44:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 06:44:33] HOME_URL="https://www.centos.org/"
[2025-05-08 06:44:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 06:44:33] 
[2025-05-08 06:44:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 06:44:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 06:44:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 06:44:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 06:44:33] 
[2025-05-08 06:44:33] 2025-05-08 10:44:18,788 | INFO     | **************************************
[2025-05-08 06:44:33] 2025-05-08 10:44:19,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-08 06:44:33] 2025-05-08 10:44:19,438 | INFO     | sufficient remaining disk space (56735301632 B)
[2025-05-08 06:44:33] 2025-05-08 10:44:19,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 06:44:33] 2025-05-08 10:44:19,438 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 06:44:33] 2025-05-08 10:44:19,439 | INFO     | update_server=False
[2025-05-08 06:44:33] 2025-05-08 10:44:19,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 06:44:33] 2025-05-08 10:44:19,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 06:44:33] 2025-05-08 10:44:19,439 | INFO     | aborting loop
[2025-05-08 06:44:33] 2025-05-08 10:44:19,482 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 06:44:33] 2025-05-08 10:44:19,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 06:44:33] 2025-05-08 10:44:19,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 06:44:33] 2025-05-08 10:44:19,657 | INFO     | all data control threads have been joined
[2025-05-08 06:44:33] 2025-05-08 10:44:19,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 06:44:33] 2025-05-08 10:44:19,867 | INFO     | all payload control threads have been joined
[2025-05-08 06:44:33] 2025-05-08 10:44:19,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 06:44:33] 2025-05-08 10:44:20,447 | INFO     | [job] retrieve thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:20,452 | INFO     | [job] job monitor thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:20,596 | INFO     | all job control threads have been joined
[2025-05-08 06:44:33] 2025-05-08 10:44:20,663 | INFO     | [data] control thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:20,674 | INFO     | [job] queue monitor thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:20,708 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:20,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:20,873 | INFO     | [payload] control thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,045 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 06:44:33] 2025-05-08 10:44:21,243 | INFO     | [job] validate thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,253 | INFO     | [data] copytool_in thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,356 | INFO     | [payload] validate_post thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,602 | INFO     | [job] control thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,649 | INFO     | [payload] failed_post thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,756 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:21,943 | INFO     | [data] copytool_out thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:25,177 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 06:44:33] 2025-05-08 10:44:26,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878394996544)>', '<ExcThread(monitor, started 139878173226752)>']
[2025-05-08 06:44:33] 2025-05-08 10:44:26,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 06:44:33] 2025-05-08 10:44:26,523 | INFO     | [monitor] control thread has ended
[2025-05-08 06:44:33] 2025-05-08 10:44:31,460 | INFO     | all workflow threads have been joined
[2025-05-08 06:44:33] 2025-05-08 10:44:31,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 06:44:33] 2025-05-08 10:44:31,461 | INFO     | traces error code: 0
[2025-05-08 06:44:33] 2025-05-08 10:44:31,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 06:44:33] 2025-05-08 10:44:31,910 [wrapper] ==== pilot stdout END ====
[2025-05-08 06:44:33] 2025-05-08 10:44:31,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 06:44:33] 2025-05-08 10:44:31,989 [wrapper] pilotpid: 37642
[2025-05-08 06:44:33] 2025-05-08 10:44:32,056 [wrapper] Pilot exit status: 0
[2025-05-08 06:44:33] 2025-05-08 10:44:32,250 [wrapper] pandaids: 6637467546 6637467546
[2025-05-08 06:44:33] 2025-05-08 10:44:32,583 [wrapper] cleanup supervisor_pilot 28142 37643
[2025-05-08 06:44:33] 2025-05-08 10:44:32,640 [wrapper] Test setup, not cleaning
[2025-05-08 06:44:33] 2025-05-08 10:44:32,662 [wrapper] apfmon messages muted
[2025-05-08 06:44:33] 2025-05-08 10:44:32,666 [wrapper] ==== wrapper stdout END ====
[2025-05-08 06:44:33] 2025-05-08 10:44:32,671 [wrapper] ==== wrapper stderr END ====
[2025-05-08 06:44:33]  *** Error codes and diagnostics ***
[2025-05-08 06:44:33]     "exeErrorCode": 0,
[2025-05-08 06:44:33]     "exeErrorDiag": "",
[2025-05-08 06:44:33]     "pilotErrorCode": 0,
[2025-05-08 06:44:33]     "pilotErrorDiag": "",
[2025-05-08 06:44:33]  *** Listing of results directory ***
[2025-05-08 06:44:33] total 639928
[2025-05-08 06:44:33] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas    495897 May  7 15:27 pilot3.tar.gz
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas      5111 May  7 15:35 queuedata.json
[2025-05-08 06:44:33] -rwx------ 1 boincer umatlas     37140 May  7 15:38 runpilot2-wrapper.sh
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas       100 May  7 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 06:44:33] -rwxr-xr-x 1 boincer umatlas      7986 May  7 18:49 run_atlas
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas       105 May  7 18:49 job.xml
[2025-05-08 06:44:33] -rw-r--r-- 3 boincer umatlas 224523713 May  7 18:49 EVNT.44506061._000818.pool.root.1
[2025-05-08 06:44:33] -rw-r--r-- 3 boincer umatlas 224523713 May  7 18:49 ATLAS.root_0
[2025-05-08 06:44:33] -rw-r--r-- 2 boincer umatlas     17569 May  7 18:49 start_atlas.sh
[2025-05-08 06:44:33] drwxrwx--x 2 boincer umatlas      4096 May  7 18:49 shared
[2025-05-08 06:44:33] -rw-r--r-- 2 boincer umatlas    508891 May  7 18:49 input.tar.gz
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas         0 May  7 18:49 boinc_lockfile
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas      2557 May  7 21:10 pandaJob.out
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas       467 May  7 21:10 setup.sh.local
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas    996852 May  7 21:10 agis_schedconf.cvmfs.json
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas      6037 May  8 06:36 init_data.xml
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas 196051030 May  8 06:42 HITS.44506063._042748.pool.root.1
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas       532 May  8 06:43 boinc_task_state.xml
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas      1062 May  8 06:43 memory_monitor_summary.json
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas   1596741 May  8 06:43 agis_ddmendpoints.agis.ALL.json
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas    584002 May  8 06:43 log.44506063._042748.job.log.tgz.1
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas      7749 May  8 06:44 heartbeat.json
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas        96 May  8 06:44 pilot_heartbeat.json
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas      8192 May  8 06:44 boinc_mmap_file
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas        29 May  8 06:44 wrapper_checkpoint.txt
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas      4353 May  8 06:44 pilotlog.txt
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas   2584832 May  8 06:44 log.44506063._042748.job.log.1
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas       357 May  8 06:44 output.list
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas       620 May  8 06:44 runtime_log
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas   3184640 May  8 06:44 result.tar.gz
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas     11506 May  8 06:44 runtime_log.err
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas       788 May  8 06:44 Q29MDmolzW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLP7LDmEhaTxn.diag
[2025-05-08 06:44:33] -rw-r--r-- 1 boincer umatlas     22994 May  8 06:44 stderr.txt
[2025-05-08 06:44:33] HITS file was successfully produced:
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas 196051030 May  8 06:42 shared/HITS.pool.root.1
[2025-05-08 06:44:33]  *** Contents of shared directory: ***
[2025-05-08 06:44:33] total 414360
[2025-05-08 06:44:33] -rw-r--r-- 3 boincer umatlas 224523713 May  7 18:49 ATLAS.root_0
[2025-05-08 06:44:33] -rw-r--r-- 2 boincer umatlas     17569 May  7 18:49 start_atlas.sh
[2025-05-08 06:44:33] -rw-r--r-- 2 boincer umatlas    508891 May  7 18:49 input.tar.gz
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas 196051030 May  8 06:42 HITS.pool.root.1
[2025-05-08 06:44:33] -rw------- 1 boincer umatlas   3184640 May  8 06:44 result.tar.gz
06:44:34 (26952): run_atlas exited; CPU time 98656.858955
06:44:34 (26952): called boinc_finish(0)

</stderr_txt>
]]>

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