Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-07 23:52:20 (33064): Detected: vboxwrapper 26206
2025-05-07 23:52:20 (33064): Detected: BOINC client v8.0.2
2025-05-07 23:52:21 (33064): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-07 23:52:21 (33064): Successfully copied 'init_data.xml' to the shared directory.
2025-05-07 23:52:22 (33064): Create VM. (boinc_5e7c271d7d08530c, slot#2)
2025-05-07 23:52:22 (33064): Setting Memory Size for VM. (4800MB)
2025-05-07 23:52:23 (33064): Setting CPU Count for VM. (8)
2025-05-07 23:52:23 (33064): Setting Chipset Options for VM.
2025-05-07 23:52:23 (33064): Setting Graphics Controller Options for VM.
2025-05-07 23:52:23 (33064): Setting Boot Options for VM.
2025-05-07 23:52:24 (33064): Setting Network Configuration for NAT.
2025-05-07 23:52:24 (33064): Enabling VM Network Access.
2025-05-07 23:52:24 (33064): Disabling USB Support for VM.
2025-05-07 23:52:24 (33064): Disabling COM Port Support for VM.
2025-05-07 23:52:25 (33064): Disabling LPT Port Support for VM.
2025-05-07 23:52:25 (33064): Disabling Audio Support for VM.
2025-05-07 23:52:25 (33064): Disabling Clipboard Support for VM.
2025-05-07 23:52:25 (33064): Disabling Drag and Drop Support for VM.
2025-05-07 23:52:26 (33064): Adding storage controller(s) to VM.
2025-05-07 23:52:26 (33064): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-07 23:52:29 (33064): Adding VirtualBox Guest Additions to VM.
2025-05-07 23:52:29 (33064): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-07 23:52:29 (33064): forwarding host port 55965 to guest port 80
2025-05-07 23:52:30 (33064): Enabling remote desktop for VM.
2025-05-07 23:52:30 (33064): Required extension pack not installed, remote desktop not enabled.
2025-05-07 23:52:30 (33064): Enabling shared directory for VM.
2025-05-07 23:52:30 (33064): Starting VM using VBoxManage interface. (boinc_5e7c271d7d08530c, slot#2)
2025-05-07 23:52:37 (33064): Successfully started VM. (PID = '49788')
2025-05-07 23:52:37 (33064): Reporting VM Process ID to BOINC.
2025-05-07 23:52:37 (33064): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-07 23:52:37 (33064): Guest Log: CPUID EDX: 0x178bfbff
2025-05-07 23:52:37 (33064): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-07 23:52:37 (33064): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-07 23:52:37 (33064): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-07 23:52:37 (33064): Detected: Web Application Enabled (http://localhost:55965)
2025-05-07 23:52:37 (33064): Preference change detected
2025-05-07 23:52:37 (33064): Setting CPU throttle for VM. (90%)
2025-05-07 23:52:37 (33064): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-07 23:52:39 (33064): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-07 23:52:39 (33064): Guest Log: BIOS: Booting from Hard Disk...
2025-05-07 23:52:42 (33064): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-07 23:52:42 (33064): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-07 23:52:42 (33064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-07 23:52:50 (33064): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-07 23:52:50 (33064): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-07 23:52:59 (33064): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.000246 main     Log opened 2025-05-07T23:52:56.730687000Z
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.000418 main     OS Product: Linux
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.000622 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.000673 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.000697 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.000698 main     Process ID: 1376
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.000699 main     Package type: LINUX_64BITS_GENERIC
2025-05-07 23:52:59 (33064): Guest Log: 00:00:00.002014 main     5.2.32 r132073 started. Verbose level = 0
2025-05-07 23:52:59 (33064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-07 23:52:59 (33064): Guest Log: [INFO] Mounting shared directory
2025-05-07 23:52:59 (33064): Guest Log: [INFO] Checking for init_data.xml
2025-05-07 23:53:04 (33064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-07 23:53:04 (33064): Guest Log: [INFO] Detected branch: prod
2025-05-07 23:53:04 (33064): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-07 23:53:04 (33064): Guest Log: Copying input files
2025-05-07 23:53:07 (33064): Guest Log: Copied input files into RunAtlas.
2025-05-07 23:53:07 (33064): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-07 23:53:07 (33064): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-07 23:53:07 (33064): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-07 23:53:07 (33064): Guest Log: Further information can be found at the LHC@home message board.
2025-05-07 23:53:09 (33064): Guest Log: 00:00:10.004813 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 535 800 000ns (GuestNow=1 746 654 788 198 692 000 ns GuestLast=1 746 661 976 734 492 000 ns fSetTimeLastLoop=true )
2025-05-07 23:53:17 (33064): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-07 23:53:17 (33064): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-07 23:53:17 (33064): Guest Log: 2.6.3.0 1670 0 32188 145726 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-07 23:53:18 (33064): Guest Log: copied the webapp to /var/www
2025-05-07 23:53:19 (33064): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-07 23:53:19 (33064): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-07 23:53:19 (33064): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-07 23:53:19 (33064): Guest Log:  *** Starting ATLAS job. (PandaID=6636773098 taskID=44506063) ***
2025-05-07 23:58:40 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 23:59:00 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-07 23:59:10 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 23:59:30 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 00:16:45 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 00:17:06 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 00:21:36 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 00:21:56 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 01:21:45 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 01:22:05 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 01:32:38 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 01:32:58 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 01:34:58 (33064): Status Report: Elapsed Time: '6000.000000'
2025-05-08 01:34:58 (33064): Status Report: CPU Time: '34979.265625'
2025-05-08 01:44:01 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 01:44:21 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 01:51:23 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 01:51:43 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 01:59:16 (33064): VM state change detected. (old = 'running', new = 'paused')
2025-05-08 01:59:36 (33064): VM state change detected. (old = 'paused', new = 'running')
2025-05-08 02:23:21 (33064): Guest Log:  *** Job finished ***
2025-05-08 02:23:21 (33064): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:09,100 | INFO     | [data] queue_monitor thread has finished
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:15,454 | INFO     | job.realtimelogging is not enabled
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:16,456 | INFO     | [payload] run_realtimelog thread has finished
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:17,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914156042048)>', '<ExcThread(monitor, started 139913559258880)>']
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:17,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:17,378 | INFO     | [monitor] control thread has ended
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,092 | INFO     | all workflow threads have been joined
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,092 | INFO     | end of generic workflow (traces error code: 0)
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,092 | INFO     | traces error code: 0
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,210 [wrapper] ==== pilot stdout END ====
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,219 [wrapper] ==== wrapper stdout RESUME ====
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,227 [wrapper] pilotpid: 6029
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,235 [wrapper] Pilot exit status: 0
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,337 [wrapper] pandaids: 6636773098
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,383 [wrapper] cleanup supervisor_pilot  4010 6030
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,394 [wrapper] Test setup, not cleaning
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,406 [wrapper] apfmon messages muted
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,417 [wrapper] ==== wrapper stdout END ====
2025-05-08 02:23:21 (33064): Guest Log: 2025-05-08 00:20:22,425 [wrapper] ==== wrapper stderr END ====
2025-05-08 02:23:21 (33064): Guest Log:  *** Error codes and diagnostics ***
2025-05-08 02:23:21 (33064): Guest Log:     "exeErrorCode": 0,
2025-05-08 02:23:21 (33064): Guest Log:     "exeErrorDiag": "",
2025-05-08 02:23:21 (33064): Guest Log:     "pilotErrorCode": 0,
2025-05-08 02:23:21 (33064): Guest Log:     "pilotErrorDiag": "",
2025-05-08 02:23:21 (33064): Guest Log:  *** Listing of results directory ***
2025-05-08 02:23:21 (33064): Guest Log: total 205304
2025-05-08 02:23:21 (33064): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  7 18:30 pilot3.tar.gz
2025-05-08 02:23:21 (33064): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  7 18:32 queuedata.json
2025-05-08 02:23:21 (33064): Guest Log: -rwx------. 1 atlas atlas     37140 May  7 18:33 runpilot2-wrapper.sh
2025-05-08 02:23:21 (33064): Guest Log: -rwxr-xr-x. 1 atlas atlas     12243 May  7 21:53 init_data.xml
2025-05-08 02:23:21 (33064): Guest Log: -rwxr-xr-x. 1 atlas atlas    508883 May  7 21:53 input.tar.gz
2025-05-08 02:23:21 (33064): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  7 21:53 start_atlas.sh
2025-05-08 02:23:21 (33064): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  7 21:53 EVNT.44506061._001665.pool.root.1 -> /data/./ATLAS.root_0
2025-05-08 02:23:21 (33064): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May  7 21:53 pandaJob.out
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas       424 May  7 21:53 setup.sh.local
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas    996828 May  7 21:54 agis_schedconf.cvmfs.json
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas   1596741 May  7 21:54 agis_ddmendpoints.agis.ALL.json
2025-05-08 02:23:21 (33064): Guest Log: drwx------. 4 atlas atlas      4096 May  7 21:54 pilot3
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas 204322086 May  8 00:18 HITS.44506063._042150.pool.root.1
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas        95 May  8 00:19 pilot_heartbeat.json
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas      1028 May  8 00:19 memory_monitor_summary.json
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas    343643 May  8 00:19 log.44506063._042150.job.log.tgz.1
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas      7681 May  8 00:20 heartbeat.json
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas      4608 May  8 00:20 pilotlog.txt
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas    722606 May  8 00:20 log.44506063._042150.job.log.1
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas       357 May  8 00:20 output.list
2025-05-08 02:23:21 (33064): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  8 00:20 runtime_log
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas   1085440 May  8 00:20 result.tar.gz
2025-05-08 02:23:21 (33064): Guest Log: -rw-r--r--. 1 atlas atlas     10958 May  8 00:20 runtime_log.err
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas       664 May  8 00:20 HSsMDm3kyW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm7J7LDmFleO1n.diag
2025-05-08 02:23:21 (33064): Guest Log: Looking for outputfile HITS.44506063._042150.pool.root.1
2025-05-08 02:23:21 (33064): Guest Log: HITS file was successfully produced
2025-05-08 02:23:21 (33064): Guest Log: -rw-------. 1 atlas atlas 204322086 May  8 00:18 /home/atlas/RunAtlas/HITS.44506063._042150.pool.root.1
2025-05-08 02:23:23 (33064): Guest Log: Successfully finished the ATLAS job!
2025-05-08 02:23:23 (33064): Guest Log: Copying the results back to the shared directory!
2025-05-08 02:23:23 (33064): Guest Log:  *** Contents of shared directory: ***
2025-05-08 02:23:23 (33064): Guest Log: total 419784
2025-05-08 02:23:23 (33064): Guest Log: -rwxrwxrwx. 1 root root 223900715 May  7 21:52 ATLAS.root_0
2025-05-08 02:23:23 (33064): Guest Log: -rwxrwxrwx. 1 root root 204322086 May  8  2025 HITS.pool.root.1
2025-05-08 02:23:23 (33064): Guest Log: -rwxrwxrwx. 1 root root     12243 May  7 21:52 init_data.xml
2025-05-08 02:23:23 (33064): Guest Log: -rwxrwxrwx. 1 root root    508883 May  7 21:52 input.tar.gz
2025-05-08 02:23:23 (33064): Guest Log: -rwxrwxrwx. 1 root root   1085440 May  8  2025 result.tar.gz
2025-05-08 02:23:23 (33064): Guest Log: -rwxrwxrwx. 1 root root     17569 May  7 21:52 start_atlas.sh
2025-05-08 02:23:23 (33064): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-08 02:23:23 (33064): VM Completion File Detected.
2025-05-08 02:23:23 (33064): Powering off VM.
2025-05-08 02:23:24 (33064): Successfully stopped VM.
2025-05-08 02:23:24 (33064): Deregistering VM. (boinc_5e7c271d7d08530c, slot#2)
2025-05-08 02:23:24 (33064): Removing network bandwidth throttle group from VM.
2025-05-08 02:23:25 (33064): Removing VM from VirtualBox.
02:23:30 (33064): called boinc_finish(0)

</stderr_txt>
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