Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:14:54 (890056): wrapper (7.7.26015): starting
09:14:54 (890056): wrapper: running run_atlas (--nthreads 2)
[2025-05-08 09:14:54] Arguments: --nthreads 2
[2025-05-08 09:14:54] Threads: 2
[2025-05-08 09:14:54] Checking for CVMFS
[2025-05-08 09:14:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 09:14:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 09:14:54] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 09:14:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 09:14:54] 2.9.2.0 16062 4376 66944 145740 0 56 19459346 36864001 0 130560 0 2195428 99.986 1100715 10421 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 09:14:54] CVMFS is ok
[2025-05-08 09:14:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 09:14:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 09:14:54] Further information can be found at the LHC@home message board.
[2025-05-08 09:14:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 09:14:54] Checking for apptainer binary...
[2025-05-08 09:14:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 09:14:54] Running /usr/bin/apptainer --version
[2025-05-08 09:14:54] apptainer version 1.3.6-6.1
[2025-05-08 09:14:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 09:14:54] magicA250a
[2025-05-08 09:14:54] apptainer works
[2025-05-08 09:14:54] Set ATHENA_PROC_NUMBER=2
[2025-05-08 09:14:54] Set ATHENA_CORE_NUMBER=2
[2025-05-08 09:14:54] Starting ATLAS job with PandaID=6636683781
[2025-05-08 09:14:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 11:49:17]  *** The last 200 lines of the pilot log: ***
[2025-05-08 11:49:17] 2025-05-08 09:48:57,306 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 11:49:17] 2025-05-08 09:48:57,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 11:49:17] 2025-05-08 09:48:57,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 11:49:17] 2025-05-08 09:48:57,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 11:49:17] 2025-05-08 09:48:57,307 | INFO     | fitting pss+swap vs Time
[2025-05-08 11:49:17] 2025-05-08 09:48:57,307 | INFO     | sum of square deviations: 1067554900.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | sum of deviations: 17960405313.999996
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | mean x: 1746693096.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | mean y: 2315844.357615894
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | -- intersect: -29383822482.884857
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | intersect: -29383822482.884857
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | chi2: 3.0290427277019756
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | sum of square deviations: 964976232.5
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | sum of deviations: 18101744814.999985
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | mean x: 1746692943.5
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | mean y: 2316054.506849315
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | -- intersect: -32763454612.697834
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | intersect: -32763454612.697834
[2025-05-08 11:49:17] 2025-05-08 09:48:57,308 | INFO     | chi2: 3.0331139015442634
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | current chi2=3.0331139015442634 (change=-0.1344046356644327 %)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | right removable region: 145
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | sum of square deviations: 964976232.5
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | sum of deviations: -11184456201.000002
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | mean x: 1746693248.5
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | mean y: 2358911.4109589043
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | -- intersect: 20247224511.694706
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | intersect: 20247224511.694706
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | chi2: 1.0216425874253823
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | current chi2=1.0216425874253823 (change=66.27176704765519 %)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,309 | INFO     | sum of square deviations: 869188390.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | sum of deviations: -31509905385.999996
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | mean x: 1746693401.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | mean y: 2391275.985815603
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | -- intersect: 63323697033.25732
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | intersect: 63323697033.25732
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | chi2: 0.09889913249808233
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | current chi2=0.09889913249808233 (change=90.31959574558107 %)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | sum of square deviations: 779958810.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | sum of deviations: -28229793469.5
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | mean x: 1746693553.5
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | mean y: 2385657.4338235296
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | -- intersect: 63222132184.57678
[2025-05-08 11:49:17] 2025-05-08 09:48:57,310 | INFO     | intersect: 63222132184.57678
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | chi2: 0.09253033148922984
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | current chi2=0.09253033148922984 (change=6.439693501837312 %)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | left removable region: 30
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | sum of square deviations: 471562330.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | sum of deviations: -18425738568.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | mean x: 1746693828.0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | mean y: 2371742.208695652
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | -- intersect: 68252360737.44323
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | intersect: 68252360737.44323
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | chi2: 0.08598901899677161
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | -- intersect: 68252360737.44323
[2025-05-08 11:49:17] 2025-05-08 09:48:57,311 | INFO     | current memory leak: -39.07 B/s (using 115 data points, chi2=0.09)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | ..............................
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . Timing measurements:
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . get job = 0 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . initial setup = 1 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . payload setup = 3 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . stage-in = 0 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . payload execution = 9209 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . stage-out = 0 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | . log creation = 0 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,312 | INFO     | ..............................
[2025-05-08 11:49:17] 2025-05-08 09:48:57,345 | INFO     | 
[2025-05-08 11:49:17] 2025-05-08 09:48:57,345 | INFO     | job summary report
[2025-05-08 11:49:17] 2025-05-08 09:48:57,345 | INFO     | --------------------------------------------------
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | PanDA job id: 6636683781
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | task id: 44506063
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | errors: (none)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | pilot state: finished 
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | transexitcode: 0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | exeerrorcode: 0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | exeerrordiag: 
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | exitcode: 0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | exitmsg: OK
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | cpuconsumptiontime: 17172 s
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | nevents: 400
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | neventsw: 0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | pid: 900101
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | pgrp: 900101
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | corecount: 2
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | event service: False
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | sizes: {0: 2393741, 3: 2393947, 11: 2393975, 9215: 2422182, 9217: 2431129, 9219: 2431185, 9223: 2431483}
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | --------------------------------------------------
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | 
[2025-05-08 11:49:17] 2025-05-08 09:48:57,346 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 11:49:17] 2025-05-08 09:48:57,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | job 6636683781 has completed (purged errors)
[2025-05-08 11:49:17] 2025-05-08 09:48:57,359 | INFO     | overall cleanup function is called
[2025-05-08 11:49:17] 2025-05-08 09:48:58,365 | INFO     | --- collectZombieJob: --- 10, [900101]
[2025-05-08 11:49:17] 2025-05-08 09:48:58,366 | INFO     | zombie collector waiting for pid 900101
[2025-05-08 11:49:17] 2025-05-08 09:48:58,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 11:49:17] 2025-05-08 09:48:58,366 | INFO     | collected zombie processes
[2025-05-08 11:49:17] 2025-05-08 09:48:58,366 | INFO     | will attempt to kill all subprocesses of pid=900101
[2025-05-08 11:49:17] 2025-05-08 09:48:58,407 | INFO     | process IDs to be killed: [900101] (in reverse order)
[2025-05-08 11:49:17] 2025-05-08 09:48:58,430 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 11:49:17] 2025-05-08 09:48:58,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 11:49:17] 2025-05-08 09:48:58,431 | INFO     | did not find any defunct processes belonging to 900101
[2025-05-08 11:49:17] 2025-05-08 09:48:58,432 | INFO     | did not find any defunct processes belonging to 900101
[2025-05-08 11:49:17] 2025-05-08 09:48:58,432 | INFO     | ready for new job
[2025-05-08 11:49:17] 2025-05-08 09:48:58,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 11:49:17] 2025-05-08 09:48:58,433 | INFO     | **************************************
[2025-05-08 11:49:17] 2025-05-08 09:48:58,433 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 11:49:17] 2025-05-08 09:48:58,433 | INFO     | **************************************
[2025-05-08 11:49:17] 2025-05-08 09:48:58,433 | INFO     | 
[2025-05-08 11:49:17] 2025-05-08 09:48:58,433 | INFO     | architecture information:
[2025-05-08 11:49:17] 2025-05-08 09:48:58,433 | INFO     | executing command: cat /etc/os-release
[2025-05-08 11:49:17] 2025-05-08 09:48:58,442 | INFO     | cat /etc/os-release:
[2025-05-08 11:49:17] NAME="CentOS Linux"
[2025-05-08 11:49:17] VERSION="7 (Core)"
[2025-05-08 11:49:17] ID="centos"
[2025-05-08 11:49:17] ID_LIKE="rhel fedora"
[2025-05-08 11:49:17] VERSION_ID="7"
[2025-05-08 11:49:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 11:49:17] ANSI_COLOR="0;31"
[2025-05-08 11:49:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 11:49:17] HOME_URL="https://www.centos.org/"
[2025-05-08 11:49:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 11:49:17] 
[2025-05-08 11:49:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 11:49:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 11:49:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 11:49:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 11:49:17] 
[2025-05-08 11:49:17] 2025-05-08 09:48:58,443 | INFO     | **************************************
[2025-05-08 11:49:17] 2025-05-08 09:48:58,730 | INFO     | PID=893690 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-08 11:49:17] 2025-05-08 09:48:58,946 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 11:49:17] 2025-05-08 09:48:58,959 | INFO     | sufficient remaining disk space (336915857408 B)
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | INFO     | update_server=False
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | INFO     | aborting loop
[2025-05-08 11:49:17] 2025-05-08 09:48:58,960 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-08 11:49:17] 2025-05-08 09:48:58,961 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 11:49:17] 2025-05-08 09:48:58,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 11:49:17] 2025-05-08 09:48:58,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 11:49:17] 2025-05-08 09:48:58,993 | INFO     | all job control threads have been joined
[2025-05-08 11:49:17] 2025-05-08 09:48:59,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 11:49:17] 2025-05-08 09:48:59,314 | INFO     | all data control threads have been joined
[2025-05-08 11:49:17] 2025-05-08 09:48:59,322 | INFO     | all payload control threads have been joined
[2025-05-08 11:49:17] 2025-05-08 09:48:59,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 11:49:17] 2025-05-08 09:48:59,965 | INFO     | [job] retrieve thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:48:59,966 | INFO     | [job] job monitor thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:48:59,966 | INFO     | [job] queue monitor thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:48:59,999 | INFO     | [job] control thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:00,257 | INFO     | [payload] validate_post thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:00,270 | INFO     | [data] copytool_in thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:00,316 | INFO     | [data] control thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:00,327 | INFO     | [payload] control thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:00,552 | INFO     | [job] validate thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:00,603 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:00,681 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:01,124 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:01,148 | INFO     | [payload] failed_post thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:01,504 | INFO     | [data] copytool_out thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:03,308 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:09,309 | INFO     | job.realtimelogging is not enabled
[2025-05-08 11:49:17] 2025-05-08 09:49:10,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 11:49:17] 2025-05-08 09:49:11,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111789508416)>', '<ExcThread(monitor, started 140111507326720)>']
[2025-05-08 11:49:17] 2025-05-08 09:49:12,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 11:49:17] 2025-05-08 09:49:12,027 | INFO     | [monitor] control thread has ended
[2025-05-08 11:49:17] 2025-05-08 09:49:16,999 | INFO     | all workflow threads have been joined
[2025-05-08 11:49:17] 2025-05-08 09:49:16,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 11:49:17] 2025-05-08 09:49:17,000 | INFO     | traces error code: 0
[2025-05-08 11:49:17] 2025-05-08 09:49:17,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 11:49:17] 2025-05-08 09:49:17,053 [wrapper] ==== pilot stdout END ====
[2025-05-08 11:49:17] 2025-05-08 09:49:17,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 11:49:17] 2025-05-08 09:49:17,059 [wrapper] pilotpid: 893690
[2025-05-08 11:49:17] 2025-05-08 09:49:17,062 [wrapper] Pilot exit status: 0
[2025-05-08 11:49:17] 2025-05-08 09:49:17,070 [wrapper] pandaids: 6636683781
[2025-05-08 11:49:17] 2025-05-08 09:49:17,086 [wrapper] cleanup supervisor_pilot  917253 893691
[2025-05-08 11:49:17] 2025-05-08 09:49:17,088 [wrapper] Test setup, not cleaning
[2025-05-08 11:49:17] 2025-05-08 09:49:17,091 [wrapper] apfmon messages muted
[2025-05-08 11:49:17] 2025-05-08 09:49:17,093 [wrapper] ==== wrapper stdout END ====
[2025-05-08 11:49:17] 2025-05-08 09:49:17,096 [wrapper] ==== wrapper stderr END ====
[2025-05-08 11:49:17]  *** Error codes and diagnostics ***
[2025-05-08 11:49:17]     "exeErrorCode": 0,
[2025-05-08 11:49:17]     "exeErrorDiag": "",
[2025-05-08 11:49:17]     "pilotErrorCode": 0,
[2025-05-08 11:49:17]     "pilotErrorDiag": "",
[2025-05-08 11:49:17]  *** Listing of results directory ***
[2025-05-08 11:49:17] total 410804
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc    495897 May  7 07:54 pilot3.tar.gz
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc      5111 May  7 08:03 queuedata.json
[2025-05-08 11:49:17] -rwx------ 1 boinc boinc     37140 May  7 08:04 runpilot2-wrapper.sh
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc       100 May  8 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 11:49:17] -rwxr-xr-x 1 boinc boinc      7986 May  8 09:14 run_atlas
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc       105 May  8 09:14 job.xml
[2025-05-08 11:49:17] -rw-r--r-- 2 boinc boinc 223851098 May  8 09:14 EVNT.44506061._001359.pool.root.1
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc      6679 May  8 09:14 init_data.xml
[2025-05-08 11:49:17] drwxrwx--x 2 boinc boinc      4096 May  8 09:14 shared
[2025-05-08 11:49:17] -rw-r--r-- 2 boinc boinc    508880 May  8 09:14 input.tar.gz
[2025-05-08 11:49:17] -rw-r--r-- 2 boinc boinc     17569 May  8 09:14 start_atlas.sh
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc         0 May  8 09:14 boinc_lockfile
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc      2557 May  8 09:14 pandaJob.out
[2025-05-08 11:49:17] -rw------- 1 boinc boinc       424 May  8 09:14 setup.sh.local
[2025-05-08 11:49:17] -rw------- 1 boinc boinc    996844 May  8 09:14 agis_schedconf.cvmfs.json
[2025-05-08 11:49:17] -rw------- 1 boinc boinc   1596741 May  8 09:14 agis_ddmendpoints.agis.ALL.json
[2025-05-08 11:49:17] drwx------ 4 boinc boinc      4096 May  8 09:15 pilot3
[2025-05-08 11:49:17] -rw------- 1 boinc boinc 190711682 May  8 11:48 HITS.44506063._034686.pool.root.1
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc       529 May  8 11:48 boinc_task_state.xml
[2025-05-08 11:49:17] -rw------- 1 boinc boinc        95 May  8 11:48 pilot_heartbeat.json
[2025-05-08 11:49:17] -rw------- 1 boinc boinc      1019 May  8 11:48 memory_monitor_summary.json
[2025-05-08 11:49:17] -rw------- 1 boinc boinc    262778 May  8 11:48 log.44506063._034686.job.log.tgz.1
[2025-05-08 11:49:17] -rw------- 1 boinc boinc      7663 May  8 11:48 heartbeat.json
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc      8192 May  8 11:48 boinc_mmap_file
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc        27 May  8 11:48 wrapper_checkpoint.txt
[2025-05-08 11:49:17] -rw------- 1 boinc boinc      4870 May  8 11:49 pilotlog.txt
[2025-05-08 11:49:17] -rw------- 1 boinc boinc    861286 May  8 11:49 log.44506063._034686.job.log.1
[2025-05-08 11:49:17] -rw------- 1 boinc boinc       357 May  8 11:49 output.list
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc       620 May  8 11:49 runtime_log
[2025-05-08 11:49:17] -rw------- 1 boinc boinc   1146880 May  8 11:49 result.tar.gz
[2025-05-08 11:49:17] -rw------- 1 boinc boinc       663 May  8 11:49 z7NODmi4mW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmo35LDmAReLLo.diag
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc     11119 May  8 11:49 runtime_log.err
[2025-05-08 11:49:17] -rw-r--r-- 1 boinc boinc     20884 May  8 11:49 stderr.txt
[2025-05-08 11:49:17] HITS file was successfully produced:
[2025-05-08 11:49:17] -rw------- 1 boinc boinc 190711682 May  8 11:48 shared/HITS.pool.root.1
[2025-05-08 11:49:17]  *** Contents of shared directory: ***
[2025-05-08 11:49:17] total 406496
[2025-05-08 11:49:17] -rw-r--r-- 2 boinc boinc 223851098 May  8 09:14 ATLAS.root_0
[2025-05-08 11:49:17] -rw-r--r-- 2 boinc boinc    508880 May  8 09:14 input.tar.gz
[2025-05-08 11:49:17] -rw-r--r-- 2 boinc boinc     17569 May  8 09:14 start_atlas.sh
[2025-05-08 11:49:17] -rw------- 1 boinc boinc 190711682 May  8 11:48 HITS.pool.root.1
[2025-05-08 11:49:17] -rw------- 1 boinc boinc   1146880 May  8 11:49 result.tar.gz
11:49:18 (890056): run_atlas exited; CPU time 17212.603725
11:49:18 (890056): called boinc_finish(0)

</stderr_txt>
]]>

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