Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:25 (1664896): wrapper (7.7.26015): starting
23:27:25 (1664896): wrapper: running run_atlas (--nthreads 12)
[2025-05-07 23:27:25] Arguments: --nthreads 12
[2025-05-07 23:27:25] Threads: 12
[2025-05-07 23:27:25] Checking for CVMFS
[2025-05-07 23:27:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 23:27:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 23:27:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 23:27:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 23:27:25] 2.11.5.0 2604 11653 238228 145740 2 113 44646320 45568001 11977 130560 0 123544331 99.796 78232927 29868 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-07 23:27:25] CVMFS is ok
[2025-05-07 23:27:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-07 23:27:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-07 23:27:25] Further information can be found at the LHC@home message board.
[2025-05-07 23:27:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 23:27:25] Checking for apptainer binary...
[2025-05-07 23:27:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 23:27:25] Running /usr/bin/apptainer --version
[2025-05-07 23:27:25] apptainer version 1.4.0-1.el9
[2025-05-07 23:27:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 23:27:25] wns0053.triumf.lcg
[2025-05-07 23:27:25] apptainer works
[2025-05-07 23:27:25] Set ATHENA_PROC_NUMBER=12
[2025-05-07 23:27:25] Set ATHENA_CORE_NUMBER=12
[2025-05-07 23:27:25] Starting ATLAS job with PandaID=6636748540
[2025-05-07 23:27:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 00:34:02]  *** The last 200 lines of the pilot log: ***
[2025-05-08 00:34:02]  guid=af632a0f-6d07-4656-b1aa-6d193d54f327
[2025-05-08 00:34:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-08 00:34:02]  is_altstaged=None
[2025-05-08 00:34:02]  is_tar=False
[2025-05-08 00:34:02]  lfn=log.44506063._038952.job.log.tgz.1
[2025-05-08 00:34:02]  mtime=0
[2025-05-08 00:34:02]  protocol_id=None
[2025-05-08 00:34:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-08 00:34:02]  replicas=None
[2025-05-08 00:34:02]  scope=mc23_13p6TeV
[2025-05-08 00:34:02]  status=None
[2025-05-08 00:34:02]  status_code=0
[2025-05-08 00:34:02]  storage_token=
[2025-05-08 00:34:02]  surl=/home/boinc/slots/0/PanDA_Pilot-6636748540/log.44506063._038952.job.log.tgz.1
[2025-05-08 00:34:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/1b/log.44506063._038952.job.log.tgz.1
[2025-05-08 00:34:02]  workdir=None
[2025-05-08 00:34:02] ]
[2025-05-08 00:34:02] 2025-05-08 07:33:37,804 | INFO     | transferring file log.44506063._038952.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6636748540/log.44506063._038952.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-05-08 00:34:02] 2025-05-08 07:33:37,804 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6636748540/log.44506063._038952.job.log.tgz.1 /home/boinc/slots/0/log.44506063._038952.job.log.t
[2025-05-08 00:34:02] 2025-05-08 07:33:37,820 | INFO     | adding to output.list: log.44506063._038952.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/1b/log.44506063._038952.job.log.tg
[2025-05-08 00:34:02] 2025-05-08 07:33:37,821 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-08 00:34:02] 2025-05-08 07:33:37,821 | INFO     | summary of transferred files:
[2025-05-08 00:34:02] 2025-05-08 07:33:37,821 | INFO     |  -- lfn=log.44506063._038952.job.log.tgz.1, status_code=0, status=transferred
[2025-05-08 00:34:02] 2025-05-08 07:33:37,821 | INFO     | stage-out finished correctly
[2025-05-08 00:34:02] 2025-05-08 07:33:38,524 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-08 00:34:02] 2025-05-08 07:33:40,836 | INFO     | job 6636748540 has state=finished
[2025-05-08 00:34:02] 2025-05-08 07:33:40,836 | INFO     | preparing for final server update for job 6636748540 in state='finished'
[2025-05-08 00:34:02] 2025-05-08 07:33:41,174 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-08 00:34:02] 2025-05-08 07:33:41,174 | INFO     | this job has now completed (state=finished)
[2025-05-08 00:34:02] 2025-05-08 07:33:41,175 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-08 00:34:02] 2025-05-08 07:33:41,175 | INFO     | log transfer has been attempted: DONE
[2025-05-08 00:34:02] 2025-05-08 07:33:41,175 | INFO     | job 6636748540 has finished - writing final server update
[2025-05-08 00:34:02] 2025-05-08 07:33:41,175 | INFO     | total number of processed events: 400 (read)
[2025-05-08 00:34:02] 2025-05-08 07:33:41,177 | INFO     | executing command: lscpu
[2025-05-08 00:34:02] 2025-05-08 07:33:41,215 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-08 00:34:02] 2025-05-08 07:33:42,501 | WARNING  | process 1674785 can no longer be monitored (due to stat problems) - aborting
[2025-05-08 00:34:02] 2025-05-08 07:33:42,501 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6636748540/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 00:34:02] 2025-05-08 07:33:42,619 | INFO     | number of running child processes to parent process 1674785: 1
[2025-05-08 00:34:02] 2025-05-08 07:33:42,619 | INFO     | maximum number of monitored processes: 6
[2025-05-08 00:34:02] 2025-05-08 07:33:43,761 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-08 00:34:02] 2025-05-08 07:33:43,761 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6636748540/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 00:34:02] 2025-05-08 07:33:43,762 | INFO     | extracted standard info from prmon json
[2025-05-08 00:34:02] 2025-05-08 07:33:43,762 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 00:34:02] 2025-05-08 07:33:43,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 00:34:02] 2025-05-08 07:33:43,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 00:34:02] 2025-05-08 07:33:43,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 00:34:02] 2025-05-08 07:33:43,763 | INFO     | fitting pss+swap vs Time
[2025-05-08 00:34:02] 2025-05-08 07:33:43,763 | INFO     | sum of square deviations: 60482328.0689655
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | sum of deviations: 12638549077.86207
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | mean x: 1746687719.586207
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | mean y: 2779370.327586207
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | -- intersect: -364989759318.28516
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | intersect: -364989759318.28516
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | chi2: 2.075823562105739
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | -- intersect: -364989759318.28516
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | current memory leak: 208.96 B/s (using 58 data points, chi2=2.08)
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | ..............................
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | . Timing measurements:
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | . get job = 0 s
[2025-05-08 00:34:02] 2025-05-08 07:33:43,764 | INFO     | . initial setup = 2 s
[2025-05-08 00:34:02] 2025-05-08 07:33:43,765 | INFO     | . payload setup = 3 s
[2025-05-08 00:34:02] 2025-05-08 07:33:43,765 | INFO     | . stage-in = 0 s
[2025-05-08 00:34:02] 2025-05-08 07:33:43,765 | INFO     | . payload execution = 3942 s
[2025-05-08 00:34:02] 2025-05-08 07:33:43,765 | INFO     | . stage-out = 0 s
[2025-05-08 00:34:02] 2025-05-08 07:33:43,765 | INFO     | . log creation = 0 s
[2025-05-08 00:34:02] 2025-05-08 07:33:43,765 | INFO     | ..............................
[2025-05-08 00:34:02] 2025-05-08 07:33:44,035 | INFO     | 
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | job summary report
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | --------------------------------------------------
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | PanDA job id: 6636748540
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | task id: 44506063
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | errors: (none)
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | pilot state: finished 
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | transexitcode: 0
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | exeerrorcode: 0
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | exeerrordiag: 
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | exitcode: 0
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | exitmsg: OK
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | cpuconsumptiontime: 28248 s
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | nevents: 400
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | neventsw: 0
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | pid: 1674785
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | pgrp: 1674785
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | corecount: 12
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | event service: False
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | sizes: {0: 2393736, 3: 2393942, 11: 2393970, 3949: 2419745, 3950: 2428680, 3951: 2428736, 3956: 2429034}
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | --------------------------------------------------
[2025-05-08 00:34:02] 2025-05-08 07:33:44,036 | INFO     | 
[2025-05-08 00:34:02] 2025-05-08 07:33:44,037 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | job 6636748540 has completed (purged errors)
[2025-05-08 00:34:02] 2025-05-08 07:33:44,051 | INFO     | overall cleanup function is called
[2025-05-08 00:34:02] 2025-05-08 07:33:45,058 | INFO     | --- collectZombieJob: --- 10, [1674785]
[2025-05-08 00:34:02] 2025-05-08 07:33:45,058 | INFO     | zombie collector waiting for pid 1674785
[2025-05-08 00:34:02] 2025-05-08 07:33:45,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 00:34:02] 2025-05-08 07:33:45,058 | INFO     | collected zombie processes
[2025-05-08 00:34:02] 2025-05-08 07:33:45,058 | INFO     | will attempt to kill all subprocesses of pid=1674785
[2025-05-08 00:34:02] 2025-05-08 07:33:45,182 | INFO     | process IDs to be killed: [1674785] (in reverse order)
[2025-05-08 00:34:02] 2025-05-08 07:33:45,232 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 00:34:02] 2025-05-08 07:33:45,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 00:34:02] 2025-05-08 07:33:45,237 | INFO     | did not find any defunct processes belonging to 1674785
[2025-05-08 00:34:02] 2025-05-08 07:33:45,242 | INFO     | did not find any defunct processes belonging to 1674785
[2025-05-08 00:34:02] 2025-05-08 07:33:45,242 | INFO     | ready for new job
[2025-05-08 00:34:02] 2025-05-08 07:33:45,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 00:34:02] 2025-05-08 07:33:45,243 | INFO     | **************************************
[2025-05-08 00:34:02] 2025-05-08 07:33:45,243 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 00:34:02] 2025-05-08 07:33:45,243 | INFO     | **************************************
[2025-05-08 00:34:02] 2025-05-08 07:33:45,244 | INFO     | 
[2025-05-08 00:34:02] 2025-05-08 07:33:45,245 | INFO     | architecture information:
[2025-05-08 00:34:02] 2025-05-08 07:33:45,246 | INFO     | executing command: cat /etc/os-release
[2025-05-08 00:34:02] 2025-05-08 07:33:45,257 | INFO     | cat /etc/os-release:
[2025-05-08 00:34:02] NAME="CentOS Linux"
[2025-05-08 00:34:02] VERSION="7 (Core)"
[2025-05-08 00:34:02] ID="centos"
[2025-05-08 00:34:02] ID_LIKE="rhel fedora"
[2025-05-08 00:34:02] VERSION_ID="7"
[2025-05-08 00:34:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 00:34:02] ANSI_COLOR="0;31"
[2025-05-08 00:34:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 00:34:02] HOME_URL="https://www.centos.org/"
[2025-05-08 00:34:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 00:34:02] 
[2025-05-08 00:34:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 00:34:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 00:34:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 00:34:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 00:34:02] 
[2025-05-08 00:34:02] 2025-05-08 07:33:45,257 | INFO     | **************************************
[2025-05-08 00:34:02] 2025-05-08 07:33:45,760 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-08 00:34:02] 2025-05-08 07:33:45,772 | INFO     | sufficient remaining disk space (1962494918656 B)
[2025-05-08 00:34:02] 2025-05-08 07:33:45,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 00:34:02] 2025-05-08 07:33:45,772 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 00:34:02] 2025-05-08 07:33:45,772 | INFO     | update_server=False
[2025-05-08 00:34:02] 2025-05-08 07:33:45,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 00:34:02] 2025-05-08 07:33:45,772 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-08 00:34:02] 2025-05-08 07:33:45,773 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 00:34:02] 2025-05-08 07:33:45,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 00:34:02] 2025-05-08 07:33:45,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 00:34:02] 2025-05-08 07:33:45,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 00:34:02] 2025-05-08 07:33:45,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 00:34:02] 2025-05-08 07:33:46,037 | INFO     | all job control threads have been joined
[2025-05-08 00:34:02] 2025-05-08 07:33:46,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 00:34:02] 2025-05-08 07:33:46,127 | INFO     | aborting loop
[2025-05-08 00:34:02] 2025-05-08 07:33:46,127 | INFO     | all payload control threads have been joined
[2025-05-08 00:34:02] 2025-05-08 07:33:46,426 | INFO     | all data control threads have been joined
[2025-05-08 00:34:02] 2025-05-08 07:33:46,778 | INFO     | [job] retrieve thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:46,778 | INFO     | [job] queue monitor thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:46,882 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,042 | INFO     | [job] control thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,057 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,075 | INFO     | [payload] failed_post thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,132 | INFO     | [job] job monitor thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,132 | INFO     | [payload] control thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,393 | INFO     | [data] copytool_in thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,431 | INFO     | [data] control thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,710 | INFO     | [payload] validate_post thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,889 | INFO     | [data] copytool_out thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,983 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:47,997 | INFO     | [job] validate thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:49,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 00:34:02] 2025-05-08 07:33:53,087 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:56,506 | INFO     | job.realtimelogging is not enabled
[2025-05-08 00:34:02] 2025-05-08 07:33:57,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 00:34:02] 2025-05-08 07:33:57,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977644623680)>', '<ExcThread(monitor, started 139977111353088)>']
[2025-05-08 00:34:02] 2025-05-08 07:33:57,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 00:34:02] 2025-05-08 07:33:57,826 | INFO     | [monitor] control thread has ended
[2025-05-08 00:34:02] 2025-05-08 07:34:02,565 | INFO     | all workflow threads have been joined
[2025-05-08 00:34:02] 2025-05-08 07:34:02,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 00:34:02] 2025-05-08 07:34:02,565 | INFO     | traces error code: 0
[2025-05-08 00:34:02] 2025-05-08 07:34:02,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 00:34:02] 2025-05-08 07:34:02,683 [wrapper] ==== pilot stdout END ====
[2025-05-08 00:34:02] 2025-05-08 07:34:02,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 00:34:02] 2025-05-08 07:34:02,686 [wrapper] pilotpid: 1668469
[2025-05-08 00:34:02] 2025-05-08 07:34:02,688 [wrapper] Pilot exit status: 0
[2025-05-08 00:34:02] 2025-05-08 07:34:02,695 [wrapper] pandaids: 6636748540
[2025-05-08 00:34:02] 2025-05-08 07:34:02,725 [wrapper] cleanup supervisor_pilot 1741195 1668470
[2025-05-08 00:34:02] 2025-05-08 07:34:02,727 [wrapper] Test setup, not cleaning
[2025-05-08 00:34:02] 2025-05-08 07:34:02,729 [wrapper] apfmon messages muted
[2025-05-08 00:34:02] 2025-05-08 07:34:02,731 [wrapper] ==== wrapper stdout END ====
[2025-05-08 00:34:02] 2025-05-08 07:34:02,733 [wrapper] ==== wrapper stderr END ====
[2025-05-08 00:34:02]  *** Error codes and diagnostics ***
[2025-05-08 00:34:02]     "exeErrorCode": 0,
[2025-05-08 00:34:02]     "exeErrorDiag": "",
[2025-05-08 00:34:02]     "pilotErrorCode": 0,
[2025-05-08 00:34:02]     "pilotErrorDiag": "",
[2025-05-08 00:34:02]  *** Listing of results directory ***
[2025-05-08 00:34:02] total 415328
[2025-05-08 00:34:02] -rwx------. 1 boinc boinc     37140 May  7 05:45 runpilot2-wrapper.sh
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc      5111 May  7 05:45 queuedata.json
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc    495897 May  7 05:45 pilot3.tar.gz
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc       100 May  7 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 00:34:02] -rwxr-xr-x. 1 boinc boinc      7986 May  7 23:27 run_atlas
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc       105 May  7 23:27 job.xml
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc      6601 May  7 23:27 init_data.xml
[2025-05-08 00:34:02] -rw-r--r--. 2 boinc boinc 222371962 May  7 23:27 EVNT.44506061._001530.pool.root.1
[2025-05-08 00:34:02] -rw-r--r--. 2 boinc boinc     17569 May  7 23:27 start_atlas.sh
[2025-05-08 00:34:02] drwxrwx--x. 2 boinc boinc      4096 May  7 23:27 shared
[2025-05-08 00:34:02] -rw-r--r--. 2 boinc boinc    508873 May  7 23:27 input.tar.gz
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc         0 May  7 23:27 boinc_lockfile
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc      2558 May  7 23:27 pandaJob.out
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc       424 May  7 23:27 setup.sh.local
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc    996844 May  7 23:27 agis_schedconf.cvmfs.json
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc   1596741 May  7 23:27 agis_ddmendpoints.agis.ALL.json
[2025-05-08 00:34:02] drwx------. 4 boinc boinc      4096 May  7 23:27 pilot3
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc 197582196 May  8 00:33 HITS.44506063._038952.pool.root.1
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc       529 May  8 00:33 boinc_task_state.xml
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc      1029 May  8 00:33 memory_monitor_summary.json
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc        95 May  8 00:33 pilot_heartbeat.json
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc    348136 May  8 00:33 log.44506063._038952.job.log.tgz.1
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc      7716 May  8 00:33 heartbeat.json
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc      8192 May  8 00:33 boinc_mmap_file
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc        27 May  8 00:33 wrapper_checkpoint.txt
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc      4547 May  8 00:34 pilotlog.txt
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc    396667 May  8 00:34 log.44506063._038952.job.log.1
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc       357 May  8 00:34 output.list
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc       620 May  8 00:34 runtime_log
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc    768000 May  8 00:34 result.tar.gz
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc     10979 May  8 00:34 runtime_log.err
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc       657 May  8 00:34 NRnNDmZKtW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbn6LDmnHIAtm.diag
[2025-05-08 00:34:02] -rw-r--r--. 1 boinc boinc     21296 May  8 00:34 stderr.txt
[2025-05-08 00:34:02] HITS file was successfully produced:
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc 197582196 May  8 00:33 shared/HITS.pool.root.1
[2025-05-08 00:34:02]  *** Contents of shared directory: ***
[2025-05-08 00:34:02] total 411396
[2025-05-08 00:34:02] -rw-r--r--. 2 boinc boinc 222371962 May  7 23:27 ATLAS.root_0
[2025-05-08 00:34:02] -rw-r--r--. 2 boinc boinc     17569 May  7 23:27 start_atlas.sh
[2025-05-08 00:34:02] -rw-r--r--. 2 boinc boinc    508873 May  7 23:27 input.tar.gz
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc 197582196 May  8 00:33 HITS.pool.root.1
[2025-05-08 00:34:02] -rw-------. 1 boinc boinc    768000 May  8 00:34 result.tar.gz
00:34:04 (1664896): run_atlas exited; CPU time 28281.790412
00:34:04 (1664896): called boinc_finish(0)

</stderr_txt>
]]>

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