Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:31:02 (1201495): wrapper (7.7.26015): starting
10:31:02 (1201495): wrapper: running run_atlas (--nthreads 3)
[2025-05-08 10:31:02] Arguments: --nthreads 3
[2025-05-08 10:31:02] Threads: 3
[2025-05-08 10:31:02] Checking for CVMFS
[2025-05-08 10:31:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 10:31:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 10:31:02] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 10:31:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 10:31:02] 2.9.2.0 13745 4224 83068 145742 1 56 30930471 36864000 0 130560 0 3075847 99.990 1031075 6687 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 10:31:02] CVMFS is ok
[2025-05-08 10:31:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 10:31:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 10:31:02] Further information can be found at the LHC@home message board.
[2025-05-08 10:31:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 10:31:02] Checking for apptainer binary...
[2025-05-08 10:31:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 10:31:02] Running /usr/bin/apptainer --version
[2025-05-08 10:31:02] apptainer version 1.3.6-6.1
[2025-05-08 10:31:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 10:31:02] belleA263b
[2025-05-08 10:31:02] apptainer works
[2025-05-08 10:31:02] Set ATHENA_PROC_NUMBER=3
[2025-05-08 10:31:02] Set ATHENA_CORE_NUMBER=3
[2025-05-08 10:31:03] Starting ATLAS job with PandaID=6636711058
[2025-05-08 10:31:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 12:03:49]  *** The last 200 lines of the pilot log: ***
[2025-05-08 12:03:49]  filetype=log
[2025-05-08 12:03:49]  guid=c922f49e-a29c-4568-af4e-f40ab0886258
[2025-05-08 12:03:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-08 12:03:49]  is_altstaged=None
[2025-05-08 12:03:49]  is_tar=False
[2025-05-08 12:03:49]  lfn=log.44506063._036854.job.log.tgz.1
[2025-05-08 12:03:49]  mtime=0
[2025-05-08 12:03:49]  protocol_id=None
[2025-05-08 12:03:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-08 12:03:49]  replicas=None
[2025-05-08 12:03:49]  scope=mc23_13p6TeV
[2025-05-08 12:03:49]  status=None
[2025-05-08 12:03:49]  status_code=0
[2025-05-08 12:03:49]  storage_token=
[2025-05-08 12:03:49]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6636711058/log.44506063._036854.job.log.tgz.1
[2025-05-08 12:03:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/f5/log.44506063._036854.job.log.tgz.1
[2025-05-08 12:03:49]  workdir=None
[2025-05-08 12:03:49] ]
[2025-05-08 12:03:49] 2025-05-08 10:03:21,639 | INFO     | transferring file log.44506063._036854.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6636711058/log.44506063._036854.job.log.tgz.1 to /local/data/boinc/
[2025-05-08 12:03:49] 2025-05-08 10:03:21,639 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6636711058/log.44506063._036854.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0368
[2025-05-08 12:03:49] 2025-05-08 10:03:21,653 | INFO     | adding to output.list: log.44506063._036854.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/f5/log.44506063._036854.job.log.tg
[2025-05-08 12:03:49] 2025-05-08 10:03:21,654 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-08 12:03:49] 2025-05-08 10:03:21,654 | INFO     | summary of transferred files:
[2025-05-08 12:03:49] 2025-05-08 10:03:21,654 | INFO     |  -- lfn=log.44506063._036854.job.log.tgz.1, status_code=0, status=transferred
[2025-05-08 12:03:49] 2025-05-08 10:03:21,654 | INFO     | stage-out finished correctly
[2025-05-08 12:03:49] 2025-05-08 10:03:23,768 | INFO     | monitor loop #425: job 0:6636711058 is in state 'finished'
[2025-05-08 12:03:49] 2025-05-08 10:03:23,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-08 12:03:49] 2025-05-08 10:03:24,970 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-08 12:03:49] 2025-05-08 10:03:26,174 | INFO     | job 6636711058 has state=finished
[2025-05-08 12:03:49] 2025-05-08 10:03:26,174 | INFO     | preparing for final server update for job 6636711058 in state='finished'
[2025-05-08 12:03:49] 2025-05-08 10:03:26,174 | INFO     | this job has now completed (state=finished)
[2025-05-08 12:03:49] 2025-05-08 10:03:26,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-08 12:03:49] 2025-05-08 10:03:26,174 | INFO     | log transfer has been attempted: DONE
[2025-05-08 12:03:49] 2025-05-08 10:03:26,175 | INFO     | job 6636711058 has finished - writing final server update
[2025-05-08 12:03:49] 2025-05-08 10:03:26,175 | INFO     | total number of processed events: 400 (read)
[2025-05-08 12:03:49] 2025-05-08 10:03:26,176 | INFO     | executing command: lscpu
[2025-05-08 12:03:49] 2025-05-08 10:03:26,192 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-08 12:03:49] 2025-05-08 10:03:26,271 | INFO     | monitor loop #426: job 0:6636711058 is in state 'finished'
[2025-05-08 12:03:49] 2025-05-08 10:03:26,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-08 12:03:49] 2025-05-08 10:03:28,619 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-08 12:03:49] 2025-05-08 10:03:28,619 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6636711058/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 12:03:49] 2025-05-08 10:03:28,620 | INFO     | extracted standard info from prmon json
[2025-05-08 12:03:49] 2025-05-08 10:03:28,620 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 12:03:49] 2025-05-08 10:03:28,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 12:03:49] 2025-05-08 10:03:28,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 12:03:49] 2025-05-08 10:03:28,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | fitting pss+swap vs Time
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | sum of square deviations: 183761585.0
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | sum of deviations: -270539697.0000006
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | mean x: 1746695924.5
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | mean y: 2425548.3571428573
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | -- intersect: 2573967289.0608153
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | intersect: 2573967289.0608153
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | chi2: 1.580173868655984
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | -- intersect: 2573967289.0608153
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | current memory leak: -1.47 B/s (using 84 data points, chi2=1.58)
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | ..............................
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | . Timing measurements:
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | . get job = 0 s
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | . initial setup = 1 s
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | . payload setup = 3 s
[2025-05-08 12:03:49] 2025-05-08 10:03:28,621 | INFO     | . stage-in = 0 s
[2025-05-08 12:03:49] 2025-05-08 10:03:28,622 | INFO     | . payload execution = 5512 s
[2025-05-08 12:03:49] 2025-05-08 10:03:28,622 | INFO     | . stage-out = 0 s
[2025-05-08 12:03:49] 2025-05-08 10:03:28,622 | INFO     | . log creation = 0 s
[2025-05-08 12:03:49] 2025-05-08 10:03:28,622 | INFO     | ..............................
[2025-05-08 12:03:49] 2025-05-08 10:03:29,077 | INFO     | 
[2025-05-08 12:03:49] 2025-05-08 10:03:29,077 | INFO     | job summary report
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | --------------------------------------------------
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | PanDA job id: 6636711058
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | task id: 44506063
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | errors: (none)
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | pilot state: finished 
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | transexitcode: 0
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | exeerrorcode: 0
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | exeerrordiag: 
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | exitcode: 0
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | exitmsg: OK
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | cpuconsumptiontime: 14619 s
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | nevents: 400
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | neventsw: 0
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | pid: 1211573
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | pgrp: 1211573
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | corecount: 3
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | event service: False
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | sizes: {0: 2393742, 3: 2393948, 11: 2393976, 5519: 2420587, 5520: 2429617, 5523: 2429617, 5527: 2429915}
[2025-05-08 12:03:49] 2025-05-08 10:03:29,078 | INFO     | --------------------------------------------------
[2025-05-08 12:03:49] 2025-05-08 10:03:29,079 | INFO     | 
[2025-05-08 12:03:49] 2025-05-08 10:03:29,079 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 12:03:49] 2025-05-08 10:03:29,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 12:03:49] 2025-05-08 10:03:29,095 | INFO     | job 6636711058 has completed (purged errors)
[2025-05-08 12:03:49] 2025-05-08 10:03:29,095 | INFO     | overall cleanup function is called
[2025-05-08 12:03:49] 2025-05-08 10:03:30,101 | INFO     | --- collectZombieJob: --- 10, [1211573]
[2025-05-08 12:03:49] 2025-05-08 10:03:30,102 | INFO     | zombie collector waiting for pid 1211573
[2025-05-08 12:03:49] 2025-05-08 10:03:30,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 12:03:49] 2025-05-08 10:03:30,102 | INFO     | collected zombie processes
[2025-05-08 12:03:49] 2025-05-08 10:03:30,102 | INFO     | will attempt to kill all subprocesses of pid=1211573
[2025-05-08 12:03:49] 2025-05-08 10:03:30,145 | INFO     | process IDs to be killed: [1211573] (in reverse order)
[2025-05-08 12:03:49] 2025-05-08 10:03:30,171 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 12:03:49] 2025-05-08 10:03:30,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 12:03:49] 2025-05-08 10:03:30,173 | INFO     | did not find any defunct processes belonging to 1211573
[2025-05-08 12:03:49] 2025-05-08 10:03:30,174 | INFO     | did not find any defunct processes belonging to 1211573
[2025-05-08 12:03:49] 2025-05-08 10:03:30,174 | INFO     | ready for new job
[2025-05-08 12:03:49] 2025-05-08 10:03:30,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 12:03:49] 2025-05-08 10:03:30,174 | INFO     | **************************************
[2025-05-08 12:03:49] 2025-05-08 10:03:30,174 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 12:03:49] 2025-05-08 10:03:30,175 | INFO     | **************************************
[2025-05-08 12:03:49] 2025-05-08 10:03:30,175 | INFO     | 
[2025-05-08 12:03:49] 2025-05-08 10:03:30,175 | INFO     | architecture information:
[2025-05-08 12:03:49] 2025-05-08 10:03:30,175 | INFO     | executing command: cat /etc/os-release
[2025-05-08 12:03:49] 2025-05-08 10:03:30,184 | INFO     | cat /etc/os-release:
[2025-05-08 12:03:49] NAME="CentOS Linux"
[2025-05-08 12:03:49] VERSION="7 (Core)"
[2025-05-08 12:03:49] ID="centos"
[2025-05-08 12:03:49] ID_LIKE="rhel fedora"
[2025-05-08 12:03:49] VERSION_ID="7"
[2025-05-08 12:03:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 12:03:49] ANSI_COLOR="0;31"
[2025-05-08 12:03:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 12:03:49] HOME_URL="https://www.centos.org/"
[2025-05-08 12:03:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 12:03:49] 
[2025-05-08 12:03:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 12:03:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 12:03:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 12:03:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 12:03:49] 
[2025-05-08 12:03:49] 2025-05-08 10:03:30,184 | INFO     | **************************************
[2025-05-08 12:03:49] 2025-05-08 10:03:30,688 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 12:03:49] 2025-05-08 10:03:30,701 | INFO     | sufficient remaining disk space (369124966400 B)
[2025-05-08 12:03:49] 2025-05-08 10:03:30,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 12:03:49] 2025-05-08 10:03:30,701 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 12:03:49] 2025-05-08 10:03:30,701 | INFO     | update_server=False
[2025-05-08 12:03:49] 2025-05-08 10:03:30,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 12:03:49] 2025-05-08 10:03:30,702 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-08 12:03:49] 2025-05-08 10:03:30,702 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 12:03:49] 2025-05-08 10:03:30,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 12:03:49] 2025-05-08 10:03:30,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 12:03:49] 2025-05-08 10:03:30,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 12:03:49] 2025-05-08 10:03:30,702 | INFO     | aborting loop
[2025-05-08 12:03:49] 2025-05-08 10:03:31,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 12:03:49] 2025-05-08 10:03:31,212 | INFO     | all data control threads have been joined
[2025-05-08 12:03:49] 2025-05-08 10:03:31,618 | INFO     | all job control threads have been joined
[2025-05-08 12:03:49] 2025-05-08 10:03:31,707 | INFO     | [job] retrieve thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:31,708 | INFO     | [job] job monitor thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:31,729 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:31,994 | INFO     | [payload] validate_post thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:32,079 | INFO     | all payload control threads have been joined
[2025-05-08 12:03:49] 2025-05-08 10:03:32,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 12:03:49] 2025-05-08 10:03:32,216 | INFO     | [data] control thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:32,545 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:32,623 | INFO     | [job] control thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:32,698 | INFO     | [data] copytool_in thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:33,059 | INFO     | [job] validate thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:33,069 | INFO     | [payload] failed_post thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:33,084 | INFO     | [payload] control thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:33,187 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:33,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 12:03:49] 2025-05-08 10:03:34,207 | INFO     | [data] copytool_out thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:34,671 | INFO     | [job] queue monitor thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:35,016 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:41,443 | INFO     | job.realtimelogging is not enabled
[2025-05-08 12:03:49] 2025-05-08 10:03:42,449 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 12:03:49] 2025-05-08 10:03:43,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985983362880)>', '<ExcThread(monitor, started 139985105700608)>']
[2025-05-08 12:03:49] 2025-05-08 10:03:44,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 12:03:49] 2025-05-08 10:03:44,777 | INFO     | [monitor] control thread has ended
[2025-05-08 12:03:49] 2025-05-08 10:03:48,903 | INFO     | all workflow threads have been joined
[2025-05-08 12:03:49] 2025-05-08 10:03:48,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 12:03:49] 2025-05-08 10:03:48,903 | INFO     | traces error code: 0
[2025-05-08 12:03:49] 2025-05-08 10:03:48,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 12:03:49] 2025-05-08 10:03:48,955 [wrapper] ==== pilot stdout END ====
[2025-05-08 12:03:49] 2025-05-08 10:03:48,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 12:03:49] 2025-05-08 10:03:48,960 [wrapper] pilotpid: 1205147
[2025-05-08 12:03:49] 2025-05-08 10:03:48,963 [wrapper] Pilot exit status: 0
[2025-05-08 12:03:49] 2025-05-08 10:03:48,970 [wrapper] pandaids: 6636711058
[2025-05-08 12:03:49] 2025-05-08 10:03:48,988 [wrapper] cleanup supervisor_pilot 1224037 1205148
[2025-05-08 12:03:49] 2025-05-08 10:03:48,990 [wrapper] Test setup, not cleaning
[2025-05-08 12:03:49] 2025-05-08 10:03:48,993 [wrapper] apfmon messages muted
[2025-05-08 12:03:49] 2025-05-08 10:03:48,995 [wrapper] ==== wrapper stdout END ====
[2025-05-08 12:03:49] 2025-05-08 10:03:48,998 [wrapper] ==== wrapper stderr END ====
[2025-05-08 12:03:49]  *** Error codes and diagnostics ***
[2025-05-08 12:03:49]     "exeErrorCode": 0,
[2025-05-08 12:03:49]     "exeErrorDiag": "",
[2025-05-08 12:03:49]     "pilotErrorCode": 0,
[2025-05-08 12:03:49]     "pilotErrorDiag": "",
[2025-05-08 12:03:49]  *** Listing of results directory ***
[2025-05-08 12:03:49] total 412992
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc    495897 May  7 10:37 pilot3.tar.gz
[2025-05-08 12:03:49] -rwx------ 1 boinc boinc     37140 May  7 10:53 runpilot2-wrapper.sh
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc      5111 May  7 10:53 queuedata.json
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc       100 May  8 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 12:03:49] -rwxr-xr-x 1 boinc boinc      7986 May  8 10:31 run_atlas
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc       105 May  8 10:31 job.xml
[2025-05-08 12:03:49] -rw-r--r-- 2 boinc boinc 222054049 May  8 10:31 EVNT.44506061._001446.pool.root.1
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc      6932 May  8 10:31 init_data.xml
[2025-05-08 12:03:49] drwxrwx--x 2 boinc boinc      4096 May  8 10:31 shared
[2025-05-08 12:03:49] -rw-r--r-- 2 boinc boinc    508881 May  8 10:31 input.tar.gz
[2025-05-08 12:03:49] -rw-r--r-- 2 boinc boinc     17569 May  8 10:31 start_atlas.sh
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc         0 May  8 10:31 boinc_lockfile
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc      2558 May  8 10:31 pandaJob.out
[2025-05-08 12:03:49] -rw------- 1 boinc boinc       424 May  8 10:31 setup.sh.local
[2025-05-08 12:03:49] -rw------- 1 boinc boinc    996852 May  8 10:31 agis_schedconf.cvmfs.json
[2025-05-08 12:03:49] -rw------- 1 boinc boinc   1596741 May  8 10:31 agis_ddmendpoints.agis.ALL.json
[2025-05-08 12:03:49] drwx------ 4 boinc boinc      4096 May  8 10:31 pilot3
[2025-05-08 12:03:49] -rw------- 1 boinc boinc        95 May  8 12:02 pilot_heartbeat.json
[2025-05-08 12:03:49] -rw------- 1 boinc boinc 195485497 May  8 12:03 HITS.44506063._036854.pool.root.1
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc       529 May  8 12:03 boinc_task_state.xml
[2025-05-08 12:03:49] -rw------- 1 boinc boinc      1032 May  8 12:03 memory_monitor_summary.json
[2025-05-08 12:03:49] -rw------- 1 boinc boinc    226138 May  8 12:03 log.44506063._036854.job.log.tgz.1
[2025-05-08 12:03:49] -rw------- 1 boinc boinc      7674 May  8 12:03 heartbeat.json
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc        27 May  8 12:03 wrapper_checkpoint.txt
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc      8192 May  8 12:03 boinc_mmap_file
[2025-05-08 12:03:49] -rw------- 1 boinc boinc      4552 May  8 12:03 pilotlog.txt
[2025-05-08 12:03:49] -rw------- 1 boinc boinc    534678 May  8 12:03 log.44506063._036854.job.log.1
[2025-05-08 12:03:49] -rw------- 1 boinc boinc       357 May  8 12:03 output.list
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc       620 May  8 12:03 runtime_log
[2025-05-08 12:03:49] -rw------- 1 boinc boinc    778240 May  8 12:03 result.tar.gz
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc     11119 May  8 12:03 runtime_log.err
[2025-05-08 12:03:49] -rw------- 1 boinc boinc       662 May  8 12:03 4uYLDmehpW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmpR6LDmSwv3Jo.diag
[2025-05-08 12:03:49] -rw-r--r-- 1 boinc boinc     21193 May  8 12:03 stderr.txt
[2025-05-08 12:03:49] HITS file was successfully produced:
[2025-05-08 12:03:49] -rw------- 1 boinc boinc 195485497 May  8 12:03 shared/HITS.pool.root.1
[2025-05-08 12:03:49]  *** Contents of shared directory: ***
[2025-05-08 12:03:49] total 409040
[2025-05-08 12:03:49] -rw-r--r-- 2 boinc boinc 222054049 May  8 10:31 ATLAS.root_0
[2025-05-08 12:03:49] -rw-r--r-- 2 boinc boinc    508881 May  8 10:31 input.tar.gz
[2025-05-08 12:03:49] -rw-r--r-- 2 boinc boinc     17569 May  8 10:31 start_atlas.sh
[2025-05-08 12:03:49] -rw------- 1 boinc boinc 195485497 May  8 12:03 HITS.pool.root.1
[2025-05-08 12:03:49] -rw------- 1 boinc boinc    778240 May  8 12:03 result.tar.gz
12:03:50 (1201495): run_atlas exited; CPU time 14637.147351
12:03:50 (1201495): called boinc_finish(0)

</stderr_txt>
]]>

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