Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:24:58 (2082109): wrapper (7.7.26015): starting
09:24:58 (2082109): wrapper: running run_atlas (--nthreads 3)
[2025-05-08 09:24:58] Arguments: --nthreads 3
[2025-05-08 09:24:58] Threads: 3
[2025-05-08 09:24:58] Checking for CVMFS
[2025-05-08 09:24:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 09:24:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 09:24:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 09:24:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 09:24:59] 2.9.2.0 2082234 0 29772 145741 4 1 20746538 36864001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 09:24:59] CVMFS is ok
[2025-05-08 09:24:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 09:24:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 09:24:59] Further information can be found at the LHC@home message board.
[2025-05-08 09:24:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 09:24:59] Checking for apptainer binary...
[2025-05-08 09:24:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 09:24:59] Running /usr/bin/apptainer --version
[2025-05-08 09:24:59] apptainer version 1.3.6-6.1
[2025-05-08 09:24:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 09:25:00] thA359
[2025-05-08 09:25:00] apptainer works
[2025-05-08 09:25:00] Set ATHENA_PROC_NUMBER=3
[2025-05-08 09:25:00] Set ATHENA_CORE_NUMBER=3
[2025-05-08 09:25:00] Starting ATLAS job with PandaID=6636764625
[2025-05-08 09:25:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:11:28 (2113098): wrapper (7.7.26015): starting
11:11:28 (2113098): wrapper: running run_atlas (--nthreads 3)
[2025-05-08 11:11:28] Arguments: --nthreads 3
[2025-05-08 11:11:28] Threads: 3
[2025-05-08 11:11:28] This job has been restarted, cleaning up previous attempt
[2025-05-08 11:11:28] Checking for CVMFS
[2025-05-08 11:11:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 11:11:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 11:11:29] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 11:11:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 11:11:30] 2.9.2.0 2113224 0 29528 145742 3 1 20768169 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 11:11:30] CVMFS is ok
[2025-05-08 11:11:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 11:11:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 11:11:30] Further information can be found at the LHC@home message board.
[2025-05-08 11:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 11:11:30] Checking for apptainer binary...
[2025-05-08 11:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 11:11:30] Running /usr/bin/apptainer --version
[2025-05-08 11:11:30] apptainer version 1.3.6-6.1
[2025-05-08 11:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 11:11:30] thA359
[2025-05-08 11:11:30] apptainer works
[2025-05-08 11:11:30] Set ATHENA_PROC_NUMBER=3
[2025-05-08 11:11:30] Set ATHENA_CORE_NUMBER=3
[2025-05-08 11:11:30] Starting ATLAS job with PandaID=6636764625
[2025-05-08 11:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 13:02:49]  *** The last 200 lines of the pilot log: ***
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | mean x: 1746698825.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | mean y: 2317166.889908257
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | -- intersect: -152684570487.5789
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | intersect: -152684570487.5789
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | chi2: 3.808750180015278
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | sum of square deviations: 348769330.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | sum of deviations: 34382783284.999985
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | mean x: 1746698672.5
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | mean y: 2315093.096153846
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | -- intersect: -172192762727.43542
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | intersect: -172192762727.43542
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | chi2: 3.7854519692146855
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | current chi2=3.7854519692146855 (change=0.6117022566310485 %)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | right removable region: 103
[2025-05-08 13:02:49] 2025-05-08 11:02:29,346 | INFO     | sum of square deviations: 348769330.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | sum of deviations: 12848086051.500004
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | mean x: 1746698977.5
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | mean y: 2381126.855769231
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | -- intersect: -64343124164.52714
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | intersect: -64343124164.52714
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | chi2: 1.7133656162447215
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | current chi2=1.7133656162447215 (change=55.015017124650356 %)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | sum of square deviations: 300842850.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | sum of deviations: -7704287251.000001
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | mean x: 1746699130.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | mean y: 2446551.242424242
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | -- intersect: 44733680278.72437
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | intersect: 44733680278.72437
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | chi2: 0.07035344861892126
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | current chi2=0.07035344861892126 (change=95.89384495919097 %)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,347 | INFO     | sum of square deviations: 257521107.5
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | sum of deviations: -8780681325.5
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | mean x: 1746699282.5
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | mean y: 2450176.9468085105
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | -- intersect: 59559547923.243195
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | intersect: 59559547923.243195
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | chi2: 0.033056030201366056
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | current chi2=0.033056030201366056 (change=53.014342793032924 %)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | sum of square deviations: 218571540.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | sum of deviations: -8328823429.000001
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | mean x: 1746699435.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | mean y: 2448398.202247191
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | -- intersect: 66561668220.00094
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | intersect: 66561668220.00094
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | chi2: 0.02919053568064027
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | current chi2=0.02919053568064027 (change=11.69376509271837 %)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | left removable region: 40
[2025-05-08 13:02:49] 2025-05-08 11:02:29,348 | INFO     | sum of square deviations: 77515872.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | sum of deviations: -4634585898.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | mean x: 1746699862.0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | mean y: 2440479.111111111
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | -- intersect: 104435640281.90436
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | intersect: 104435640281.90436
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | chi2: 0.01861138230052673
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | -- intersect: 104435640281.90436
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | current memory leak: -59.79 B/s (using 63 data points, chi2=0.02)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | ..............................
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . Timing measurements:
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . get job = 0 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . initial setup = 0 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . payload setup = 7 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . stage-in = 0 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . payload execution = 6610 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . stage-out = 0 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | . log creation = 0 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,349 | INFO     | ..............................
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | 
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | job summary report
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | --------------------------------------------------
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | PanDA job id: 6636764625
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | task id: 44506063
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | errors: (none)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | pilot state: finished 
[2025-05-08 13:02:49] 2025-05-08 11:02:29,381 | INFO     | transexitcode: 0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | exeerrorcode: 0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | exeerrordiag: 
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | exitcode: 0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | exitmsg: OK
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | cpuconsumptiontime: 17872 s
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | nevents: 400
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | neventsw: 0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | pid: 2123686
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | pgrp: 2123686
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | corecount: 3
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | event service: False
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | sizes: {0: 2393742, 5: 2393948, 10: 2394004, 6620: 2421074, 6622: 2430021, 6623: 2430077, 6628: 2430375}
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | --------------------------------------------------
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | 
[2025-05-08 13:02:49] 2025-05-08 11:02:29,382 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | job 6636764625 has completed (purged errors)
[2025-05-08 13:02:49] 2025-05-08 11:02:29,395 | INFO     | overall cleanup function is called
[2025-05-08 13:02:49] 2025-05-08 11:02:30,401 | INFO     | --- collectZombieJob: --- 10, [2123686]
[2025-05-08 13:02:49] 2025-05-08 11:02:30,402 | INFO     | zombie collector waiting for pid 2123686
[2025-05-08 13:02:49] 2025-05-08 11:02:30,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 13:02:49] 2025-05-08 11:02:30,402 | INFO     | collected zombie processes
[2025-05-08 13:02:49] 2025-05-08 11:02:30,402 | INFO     | will attempt to kill all subprocesses of pid=2123686
[2025-05-08 13:02:49] 2025-05-08 11:02:30,491 | INFO     | process IDs to be killed: [2123686] (in reverse order)
[2025-05-08 13:02:49] 2025-05-08 11:02:30,523 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 13:02:49] 2025-05-08 11:02:30,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 13:02:49] 2025-05-08 11:02:30,524 | INFO     | did not find any defunct processes belonging to 2123686
[2025-05-08 13:02:49] 2025-05-08 11:02:30,526 | INFO     | did not find any defunct processes belonging to 2123686
[2025-05-08 13:02:49] 2025-05-08 11:02:30,526 | INFO     | ready for new job
[2025-05-08 13:02:49] 2025-05-08 11:02:30,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 13:02:49] 2025-05-08 11:02:30,526 | INFO     | **************************************
[2025-05-08 13:02:49] 2025-05-08 11:02:30,526 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 13:02:49] 2025-05-08 11:02:30,526 | INFO     | **************************************
[2025-05-08 13:02:49] 2025-05-08 11:02:30,526 | INFO     | 
[2025-05-08 13:02:49] 2025-05-08 11:02:30,527 | INFO     | architecture information:
[2025-05-08 13:02:49] 2025-05-08 11:02:30,527 | INFO     | executing command: cat /etc/os-release
[2025-05-08 13:02:49] 2025-05-08 11:02:30,538 | INFO     | cat /etc/os-release:
[2025-05-08 13:02:49] NAME="CentOS Linux"
[2025-05-08 13:02:49] VERSION="7 (Core)"
[2025-05-08 13:02:49] ID="centos"
[2025-05-08 13:02:49] ID_LIKE="rhel fedora"
[2025-05-08 13:02:49] VERSION_ID="7"
[2025-05-08 13:02:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 13:02:49] ANSI_COLOR="0;31"
[2025-05-08 13:02:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 13:02:49] HOME_URL="https://www.centos.org/"
[2025-05-08 13:02:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 13:02:49] 
[2025-05-08 13:02:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 13:02:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 13:02:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 13:02:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 13:02:49] 
[2025-05-08 13:02:49] 2025-05-08 11:02:30,538 | INFO     | **************************************
[2025-05-08 13:02:49] 2025-05-08 11:02:31,042 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 13:02:49] 2025-05-08 11:02:31,055 | INFO     | sufficient remaining disk space (836462706688 B)
[2025-05-08 13:02:49] 2025-05-08 11:02:31,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | INFO     | update_server=False
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 13:02:49] 2025-05-08 11:02:31,056 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 13:02:49] 2025-05-08 11:02:31,057 | INFO     | aborting loop
[2025-05-08 13:02:49] 2025-05-08 11:02:31,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 13:02:49] 2025-05-08 11:02:31,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 13:02:49] 2025-05-08 11:02:31,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 13:02:49] 2025-05-08 11:02:31,961 | INFO     | all data control threads have been joined
[2025-05-08 13:02:49] 2025-05-08 11:02:32,061 | INFO     | [job] retrieve thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:32,062 | INFO     | [job] job monitor thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:32,063 | INFO     | [job] queue monitor thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:32,362 | INFO     | all payload control threads have been joined
[2025-05-08 13:02:49] 2025-05-08 11:02:32,438 | INFO     | all job control threads have been joined
[2025-05-08 13:02:49] 2025-05-08 11:02:32,498 | INFO     | [payload] validate_post thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:32,738 | INFO     | [data] copytool_in thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:32,968 | INFO     | [data] control thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:32,983 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:33,068 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:33,124 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:33,125 | INFO     | [job] validate thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:33,368 | INFO     | [payload] control thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:33,444 | INFO     | [job] control thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:33,528 | INFO     | [data] copytool_out thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:33,569 | INFO     | [payload] failed_post thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:35,063 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:42,082 | INFO     | job.realtimelogging is not enabled
[2025-05-08 13:02:49] 2025-05-08 11:02:43,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 13:02:49] 2025-05-08 11:02:44,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640550930240)>', '<ExcThread(monitor, started 140639836563200)>']
[2025-05-08 13:02:49] 2025-05-08 11:02:44,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 13:02:49] 2025-05-08 11:02:44,124 | INFO     | [monitor] control thread has ended
[2025-05-08 13:02:49] 2025-05-08 11:02:49,121 | INFO     | all workflow threads have been joined
[2025-05-08 13:02:49] 2025-05-08 11:02:49,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 13:02:49] 2025-05-08 11:02:49,122 | INFO     | traces error code: 0
[2025-05-08 13:02:49] 2025-05-08 11:02:49,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 13:02:49] 2025-05-08 11:02:49,172 [wrapper] ==== pilot stdout END ====
[2025-05-08 13:02:49] 2025-05-08 11:02:49,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 13:02:49] 2025-05-08 11:02:49,178 [wrapper] pilotpid: 2117236
[2025-05-08 13:02:49] 2025-05-08 11:02:49,181 [wrapper] Pilot exit status: 0
[2025-05-08 13:02:49] 2025-05-08 11:02:49,188 [wrapper] pandaids: 6636764625 6636764625
[2025-05-08 13:02:49] 2025-05-08 11:02:49,206 [wrapper] cleanup supervisor_pilot 2141200 2117237
[2025-05-08 13:02:49] 2025-05-08 11:02:49,209 [wrapper] Test setup, not cleaning
[2025-05-08 13:02:49] 2025-05-08 11:02:49,211 [wrapper] apfmon messages muted
[2025-05-08 13:02:49] 2025-05-08 11:02:49,214 [wrapper] ==== wrapper stdout END ====
[2025-05-08 13:02:49] 2025-05-08 11:02:49,216 [wrapper] ==== wrapper stderr END ====
[2025-05-08 13:02:49]  *** Error codes and diagnostics ***
[2025-05-08 13:02:49]     "exeErrorCode": 0,
[2025-05-08 13:02:49]     "exeErrorDiag": "",
[2025-05-08 13:02:49]     "pilotErrorCode": 0,
[2025-05-08 13:02:49]     "pilotErrorDiag": "",
[2025-05-08 13:02:49]  *** Listing of results directory ***
[2025-05-08 13:02:49] total 638768
[2025-05-08 13:02:49] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc    495897 May  7 17:46 pilot3.tar.gz
[2025-05-08 13:02:49] -rwx------ 1 boinc boinc     37140 May  7 17:49 runpilot2-wrapper.sh
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc      5111 May  7 17:49 queuedata.json
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc       100 May  8 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 13:02:49] -rwxr-xr-x 1 boinc boinc      7986 May  8 09:24 run_atlas
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc       105 May  8 09:24 job.xml
[2025-05-08 13:02:49] -rw-r--r-- 3 boinc boinc 223297611 May  8 09:24 EVNT.44506061._001600.pool.root.1
[2025-05-08 13:02:49] -rw-r--r-- 3 boinc boinc 223297611 May  8 09:24 ATLAS.root_0
[2025-05-08 13:02:49] drwxrwx--x 2 boinc boinc      4096 May  8 09:24 shared
[2025-05-08 13:02:49] -rw-r--r-- 2 boinc boinc    508875 May  8 09:24 input.tar.gz
[2025-05-08 13:02:49] -rw-r--r-- 2 boinc boinc     17569 May  8 09:24 start_atlas.sh
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc         0 May  8 09:24 boinc_lockfile
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc      6686 May  8 11:11 init_data.xml
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc      2558 May  8 11:11 pandaJob.out
[2025-05-08 13:02:49] -rw------- 1 boinc boinc       424 May  8 11:11 setup.sh.local
[2025-05-08 13:02:49] -rw------- 1 boinc boinc    996852 May  8 11:11 agis_schedconf.cvmfs.json
[2025-05-08 13:02:49] -rw------- 1 boinc boinc 201890846 May  8 13:02 HITS.44506063._040720.pool.root.1
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc       531 May  8 13:02 boinc_task_state.xml
[2025-05-08 13:02:49] -rw------- 1 boinc boinc      1030 May  8 13:02 memory_monitor_summary.json
[2025-05-08 13:02:49] -rw------- 1 boinc boinc        96 May  8 13:02 pilot_heartbeat.json
[2025-05-08 13:02:49] -rw------- 1 boinc boinc   1596741 May  8 13:02 agis_ddmendpoints.agis.ALL.json
[2025-05-08 13:02:49] -rw------- 1 boinc boinc    249113 May  8 13:02 log.44506063._040720.job.log.tgz.1
[2025-05-08 13:02:49] -rw------- 1 boinc boinc      7655 May  8 13:02 heartbeat.json
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc        28 May  8 13:02 wrapper_checkpoint.txt
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc      8192 May  8 13:02 boinc_mmap_file
[2025-05-08 13:02:49] -rw------- 1 boinc boinc      4552 May  8 13:02 pilotlog.txt
[2025-05-08 13:02:49] -rw------- 1 boinc boinc    631590 May  8 13:02 log.44506063._040720.job.log.1
[2025-05-08 13:02:49] -rw------- 1 boinc boinc       357 May  8 13:02 output.list
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc       620 May  8 13:02 runtime_log
[2025-05-08 13:02:49] -rw------- 1 boinc boinc    901120 May  8 13:02 result.tar.gz
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc     11184 May  8 13:02 runtime_log.err
[2025-05-08 13:02:49] -rw------- 1 boinc boinc       784 May  8 13:02 bIANDmZCwW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmi56LDmMfxz0m.diag
[2025-05-08 13:02:49] -rw-r--r-- 1 boinc boinc     22823 May  8 13:02 stderr.txt
[2025-05-08 13:02:49] HITS file was successfully produced:
[2025-05-08 13:02:49] -rw------- 1 boinc boinc 201890846 May  8 13:02 shared/HITS.pool.root.1
[2025-05-08 13:02:49]  *** Contents of shared directory: ***
[2025-05-08 13:02:49] total 416632
[2025-05-08 13:02:49] -rw-r--r-- 3 boinc boinc 223297611 May  8 09:24 ATLAS.root_0
[2025-05-08 13:02:49] -rw-r--r-- 2 boinc boinc    508875 May  8 09:24 input.tar.gz
[2025-05-08 13:02:49] -rw-r--r-- 2 boinc boinc     17569 May  8 09:24 start_atlas.sh
[2025-05-08 13:02:49] -rw------- 1 boinc boinc 201890846 May  8 13:02 HITS.pool.root.1
[2025-05-08 13:02:49] -rw------- 1 boinc boinc    901120 May  8 13:02 result.tar.gz
13:02:51 (2113098): run_atlas exited; CPU time 17916.781072
13:02:51 (2113098): called boinc_finish(0)

</stderr_txt>
]]>

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