Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:41:46 (1938152): wrapper (7.7.26015): starting
06:41:46 (1938152): wrapper: running run_atlas (--nthreads 2)
[2025-05-08 06:41:46] Arguments: --nthreads 2
[2025-05-08 06:41:46] Threads: 2
[2025-05-08 06:41:46] Checking for CVMFS
[2025-05-08 06:41:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 06:41:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 06:41:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 06:41:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 06:41:47] 2.9.2.0 1045126 4278 70932 145737 2 55 36397762 36864001 0 130560 0 2114955 99.986 1099503 13399 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 06:41:47] CVMFS is ok
[2025-05-08 06:41:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 06:41:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 06:41:47] Further information can be found at the LHC@home message board.
[2025-05-08 06:41:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 06:41:47] Checking for apptainer binary...
[2025-05-08 06:41:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 06:41:47] Running /usr/bin/apptainer --version
[2025-05-08 06:41:47] apptainer version 1.3.6-6.1
[2025-05-08 06:41:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 06:41:47] atlasA217
[2025-05-08 06:41:47] apptainer works
[2025-05-08 06:41:47] Set ATHENA_PROC_NUMBER=2
[2025-05-08 06:41:47] Set ATHENA_CORE_NUMBER=2
[2025-05-08 06:41:47] Starting ATLAS job with PandaID=6636758408
[2025-05-08 06:41:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 09:22:14]  *** The last 200 lines of the pilot log: ***
[2025-05-08 09:22:14] 2025-05-08 07:21:32,655 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6636758408/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,655 | INFO     | extracted standard info from prmon json
[2025-05-08 09:22:14] 2025-05-08 07:21:32,655 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 09:22:14] 2025-05-08 07:21:32,656 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 09:22:14] 2025-05-08 07:21:32,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 09:22:14] 2025-05-08 07:21:32,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 09:22:14] 2025-05-08 07:21:32,657 | INFO     | fitting pss+swap vs Time
[2025-05-08 09:22:14] 2025-05-08 07:21:32,657 | INFO     | sum of square deviations: 1199940638.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,657 | INFO     | sum of deviations: 20397357510.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,657 | INFO     | mean x: 1746684093.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | mean y: 2285594.305732484
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | -- intersect: -29688966434.072594
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | intersect: -29688966434.072594
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | chi2: 3.096198599194457
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | sum of square deviations: 1088905998.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | sum of deviations: 20055243402.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | mean x: 1746683940.5
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | mean y: 2285124.1315789474
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | -- intersect: -32167775135.828518
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | intersect: -32167775135.828518
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | chi2: 3.1013933864289305
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | current chi2=3.1013933864289305 (change=-0.16777952279369504 %)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,658 | INFO     | right removable region: 151
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | sum of square deviations: 1088905998.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | sum of deviations: -9101706025.5
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | mean x: 1746684245.5
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | mean y: 2325871.125
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | -- intersect: 14602122870.234993
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | intersect: 14602122870.234993
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | chi2: 1.1343048864342966
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | current chi2=1.1343048864342966 (change=63.36459532248963 %)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,659 | INFO     | sum of square deviations: 984941258.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | sum of deviations: -29504171766.999996
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | mean x: 1746684398.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | mean y: 2355802.292517007
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | -- intersect: 52324741612.3618
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | intersect: 52324741612.3618
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | chi2: 0.2542063782170139
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | current chi2=0.2542063782170139 (change=77.58923713922144 %)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | sum of square deviations: 887813855.5
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | sum of deviations: -24100885188.500004
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | mean x: 1746684550.5
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | mean y: 2347253.3591549294
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | -- intersect: 47418417132.5786
[2025-05-08 09:22:14] 2025-05-08 07:21:32,660 | INFO     | intersect: 47418417132.5786
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | chi2: 0.23335925064273438
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | current chi2=0.23335925064273438 (change=8.20086723256114 %)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | left removable region: 30
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | sum of square deviations: 549294020.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | sum of deviations: -1865047488.9999998
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | mean x: 1746684825.0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | mean y: 2307503.8925619833
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | -- intersect: 5932920305.649723
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | intersect: 5932920305.649723
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | chi2: 0.015815870586586043
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | -- intersect: 5932920305.649723
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | current memory leak: -3.40 B/s (using 121 data points, chi2=0.02)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | ..............................
[2025-05-08 09:22:14] 2025-05-08 07:21:32,661 | INFO     | . Timing measurements:
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | . get job = 0 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | . initial setup = 1 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | . payload setup = 3 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | . stage-in = 0 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | . payload execution = 9552 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | . stage-out = 0 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | . log creation = 0 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,662 | INFO     | ..............................
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | 
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | job summary report
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | --------------------------------------------------
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | PanDA job id: 6636758408
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | task id: 44506063
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | errors: (none)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | pilot state: finished 
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | transexitcode: 0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | exeerrorcode: 0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | exeerrordiag: 
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | exitcode: 0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | exitmsg: OK
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | cpuconsumptiontime: 17793 s
[2025-05-08 09:22:14] 2025-05-08 07:21:32,696 | INFO     | nevents: 400
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | neventsw: 0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | pid: 1948197
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | pgrp: 1948197
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | corecount: 2
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | event service: False
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | sizes: {0: 2393520, 1: 2393719, 3: 2393925, 11: 2393953, 9559: 2422354, 9560: 2431301, 9562: 2431485, 9564: 2431655}
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | --------------------------------------------------
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | 
[2025-05-08 09:22:14] 2025-05-08 07:21:32,697 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 09:22:14] 2025-05-08 07:21:32,711 | INFO     | job 6636758408 has completed (purged errors)
[2025-05-08 09:22:14] 2025-05-08 07:21:32,711 | INFO     | overall cleanup function is called
[2025-05-08 09:22:14] 2025-05-08 07:21:33,717 | INFO     | --- collectZombieJob: --- 10, [1948197]
[2025-05-08 09:22:14] 2025-05-08 07:21:33,717 | INFO     | zombie collector waiting for pid 1948197
[2025-05-08 09:22:14] 2025-05-08 07:21:33,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 09:22:14] 2025-05-08 07:21:33,718 | INFO     | collected zombie processes
[2025-05-08 09:22:14] 2025-05-08 07:21:33,718 | INFO     | will attempt to kill all subprocesses of pid=1948197
[2025-05-08 09:22:14] 2025-05-08 07:21:33,772 | INFO     | process IDs to be killed: [1948197] (in reverse order)
[2025-05-08 09:22:14] 2025-05-08 07:21:33,800 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 09:22:14] 2025-05-08 07:21:33,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 09:22:14] 2025-05-08 07:21:33,802 | INFO     | did not find any defunct processes belonging to 1948197
[2025-05-08 09:22:14] 2025-05-08 07:21:33,803 | INFO     | did not find any defunct processes belonging to 1948197
[2025-05-08 09:22:14] 2025-05-08 07:21:33,804 | INFO     | ready for new job
[2025-05-08 09:22:14] 2025-05-08 07:21:33,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 09:22:14] 2025-05-08 07:21:33,804 | INFO     | **************************************
[2025-05-08 09:22:14] 2025-05-08 07:21:33,804 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 09:22:14] 2025-05-08 07:21:33,804 | INFO     | **************************************
[2025-05-08 09:22:14] 2025-05-08 07:21:33,804 | INFO     | 
[2025-05-08 09:22:14] 2025-05-08 07:21:33,805 | INFO     | architecture information:
[2025-05-08 09:22:14] 2025-05-08 07:21:33,805 | INFO     | executing command: cat /etc/os-release
[2025-05-08 09:22:14] 2025-05-08 07:21:33,814 | INFO     | cat /etc/os-release:
[2025-05-08 09:22:14] NAME="CentOS Linux"
[2025-05-08 09:22:14] VERSION="7 (Core)"
[2025-05-08 09:22:14] ID="centos"
[2025-05-08 09:22:14] ID_LIKE="rhel fedora"
[2025-05-08 09:22:14] VERSION_ID="7"
[2025-05-08 09:22:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 09:22:14] ANSI_COLOR="0;31"
[2025-05-08 09:22:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 09:22:14] HOME_URL="https://www.centos.org/"
[2025-05-08 09:22:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 09:22:14] 
[2025-05-08 09:22:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 09:22:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 09:22:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 09:22:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 09:22:14] 
[2025-05-08 09:22:14] 2025-05-08 07:21:33,814 | INFO     | **************************************
[2025-05-08 09:22:14] 2025-05-08 07:21:34,318 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 09:22:14] 2025-05-08 07:21:34,336 | INFO     | sufficient remaining disk space (319680413696 B)
[2025-05-08 09:22:14] 2025-05-08 07:21:34,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 09:22:14] 2025-05-08 07:21:34,337 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 09:22:14] 2025-05-08 07:21:34,337 | INFO     | update_server=False
[2025-05-08 09:22:14] 2025-05-08 07:21:34,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 09:22:14] 2025-05-08 07:21:34,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 09:22:14] 2025-05-08 07:21:34,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 09:22:14] 2025-05-08 07:21:34,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 09:22:14] 2025-05-08 07:21:34,644 | INFO     | aborting loop
[2025-05-08 09:22:14] 2025-05-08 07:21:34,654 | INFO     | PID=1941785 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-08 09:22:14] 2025-05-08 07:21:34,655 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 09:22:14] 2025-05-08 07:21:34,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 09:22:14] 2025-05-08 07:21:34,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 09:22:14] 2025-05-08 07:21:35,025 | INFO     | all data control threads have been joined
[2025-05-08 09:22:14] 2025-05-08 07:21:35,027 | INFO     | all job control threads have been joined
[2025-05-08 09:22:14] 2025-05-08 07:21:35,343 | INFO     | [job] retrieve thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:35,344 | INFO     | [job] queue monitor thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:35,511 | INFO     | all payload control threads have been joined
[2025-05-08 09:22:14] 2025-05-08 07:21:35,587 | INFO     | [payload] failed_post thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:35,650 | INFO     | [job] job monitor thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:35,873 | INFO     | [data] copytool_in thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:35,989 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,031 | INFO     | [data] control thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,032 | INFO     | [job] control thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,052 | INFO     | [job] validate thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 09:22:14] 2025-05-08 07:21:36,177 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,265 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,354 | INFO     | [data] copytool_out thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,517 | INFO     | [payload] control thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:36,705 | INFO     | [payload] validate_post thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:40,090 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 09:22:14] 2025-05-08 07:21:40,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528274069312)>', '<ExcThread(monitor, started 140527395645184)>']
[2025-05-08 09:22:14] 2025-05-08 07:21:41,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 09:22:14] 2025-05-08 07:21:41,692 | INFO     | [monitor] control thread has ended
[2025-05-08 09:22:14] 2025-05-08 07:21:45,733 | INFO     | all workflow threads have been joined
[2025-05-08 09:22:14] 2025-05-08 07:21:45,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 09:22:14] 2025-05-08 07:21:45,735 | INFO     | traces error code: 0
[2025-05-08 09:22:14] 2025-05-08 07:21:45,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 09:22:14] 2025-05-08 07:21:45,790 [wrapper] ==== pilot stdout END ====
[2025-05-08 09:22:14] 2025-05-08 07:21:45,793 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 09:22:14] 2025-05-08 07:21:45,796 [wrapper] pilotpid: 1941785
[2025-05-08 09:22:14] 2025-05-08 07:21:45,799 [wrapper] Pilot exit status: 0
[2025-05-08 09:22:14] 2025-05-08 07:21:45,806 [wrapper] pandaids: 6636758408
[2025-05-08 09:22:14] 2025-05-08 07:21:45,825 [wrapper] cleanup supervisor_pilot 1967112 1941786
[2025-05-08 09:22:14] 2025-05-08 07:21:45,828 [wrapper] Test setup, not cleaning
[2025-05-08 09:22:14] 2025-05-08 07:21:45,831 [wrapper] apfmon messages muted
[2025-05-08 09:22:14] 2025-05-08 07:21:45,833 [wrapper] ==== wrapper stdout END ====
[2025-05-08 09:22:14] 2025-05-08 07:21:45,836 [wrapper] ==== wrapper stderr END ====
[2025-05-08 09:22:14]  *** Error codes and diagnostics ***
[2025-05-08 09:22:14]     "exeErrorCode": 0,
[2025-05-08 09:22:14]     "exeErrorDiag": "",
[2025-05-08 09:22:14]     "pilotErrorCode": 0,
[2025-05-08 09:22:14]     "pilotErrorDiag": "",
[2025-05-08 09:22:14]  *** Listing of results directory ***
[2025-05-08 09:22:14] total 416192
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc    495897 May  7 16:37 pilot3.tar.gz
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc      5111 May  7 16:40 queuedata.json
[2025-05-08 09:22:14] -rwx------ 1 boinc boinc     37140 May  7 16:41 runpilot2-wrapper.sh
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc       100 May  8 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 09:22:14] -rwxr-xr-x 1 boinc boinc      7986 May  8 06:41 run_atlas
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc       105 May  8 06:41 job.xml
[2025-05-08 09:22:14] -rw-r--r-- 2 boinc boinc 223662419 May  8 06:41 EVNT.44506061._001576.pool.root.1
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc      6678 May  8 06:41 init_data.xml
[2025-05-08 09:22:14] drwxrwx--x 2 boinc boinc      4096 May  8 06:41 shared
[2025-05-08 09:22:14] -rw-r--r-- 2 boinc boinc    508880 May  8 06:41 input.tar.gz
[2025-05-08 09:22:14] -rw-r--r-- 2 boinc boinc     17569 May  8 06:41 start_atlas.sh
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc         0 May  8 06:41 boinc_lockfile
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc      2557 May  8 06:41 pandaJob.out
[2025-05-08 09:22:14] -rw------- 1 boinc boinc       424 May  8 06:41 setup.sh.local
[2025-05-08 09:22:14] -rw------- 1 boinc boinc    996836 May  8 06:41 agis_schedconf.cvmfs.json
[2025-05-08 09:22:14] -rw------- 1 boinc boinc   1596741 May  8 06:41 agis_ddmendpoints.agis.ALL.json
[2025-05-08 09:22:14] drwx------ 4 boinc boinc      4096 May  8 06:41 pilot3
[2025-05-08 09:22:14] -rw------- 1 boinc boinc        95 May  8 09:20 pilot_heartbeat.json
[2025-05-08 09:22:14] -rw------- 1 boinc boinc 196389796 May  8 09:21 HITS.44506063._040108.pool.root.1
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc       530 May  8 09:21 boinc_task_state.xml
[2025-05-08 09:22:14] -rw------- 1 boinc boinc      1022 May  8 09:21 memory_monitor_summary.json
[2025-05-08 09:22:14] -rw------- 1 boinc boinc    250690 May  8 09:21 log.44506063._040108.job.log.tgz.1
[2025-05-08 09:22:14] -rw------- 1 boinc boinc      7656 May  8 09:21 heartbeat.json
[2025-05-08 09:22:14] -rw------- 1 boinc boinc      4676 May  8 09:21 pilotlog.txt
[2025-05-08 09:22:14] -rw------- 1 boinc boinc    891183 May  8 09:21 log.44506063._040108.job.log.1
[2025-05-08 09:22:14] -rw------- 1 boinc boinc       357 May  8 09:21 output.list
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc       620 May  8 09:21 runtime_log
[2025-05-08 09:22:14] -rw------- 1 boinc boinc   1157120 May  8 09:21 result.tar.gz
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc     11114 May  8 09:21 runtime_log.err
[2025-05-08 09:22:14] -rw------- 1 boinc boinc       662 May  8 09:21 kXYNDmg8uW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOz6LDmj3KqFm.diag
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc      8192 May  8 09:22 boinc_mmap_file
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc        27 May  8 09:22 wrapper_checkpoint.txt
[2025-05-08 09:22:14] -rw-r--r-- 1 boinc boinc     20918 May  8 09:22 stderr.txt
[2025-05-08 09:22:14] HITS file was successfully produced:
[2025-05-08 09:22:14] -rw------- 1 boinc boinc 196389796 May  8 09:21 shared/HITS.pool.root.1
[2025-05-08 09:22:14]  *** Contents of shared directory: ***
[2025-05-08 09:22:14] total 411868
[2025-05-08 09:22:14] -rw-r--r-- 2 boinc boinc 223662419 May  8 06:41 ATLAS.root_0
[2025-05-08 09:22:14] -rw-r--r-- 2 boinc boinc    508880 May  8 06:41 input.tar.gz
[2025-05-08 09:22:14] -rw-r--r-- 2 boinc boinc     17569 May  8 06:41 start_atlas.sh
[2025-05-08 09:22:14] -rw------- 1 boinc boinc 196389796 May  8 09:21 HITS.pool.root.1
[2025-05-08 09:22:14] -rw------- 1 boinc boinc   1157120 May  8 09:21 result.tar.gz
09:22:16 (1938152): run_atlas exited; CPU time 17860.527663
09:22:16 (1938152): called boinc_finish(0)

</stderr_txt>
]]>

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