Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:16:15 (14386): wrapper (7.7.26015): starting
02:16:15 (14386): wrapper: running run_atlas (--nthreads 8)
[2025-05-08 02:16:15] Arguments: --nthreads 8
[2025-05-08 02:16:15] Threads: 8
[2025-05-08 02:16:15] Checking for CVMFS
[2025-05-08 02:16:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 02:16:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 02:16:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 02:16:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 02:16:17] 2.11.2.0 15068 3933 83348 145730 1 10 24546382 25165824 96 130560 0 1653325 99.877 1235180 3092 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-08 02:16:17] CVMFS is ok
[2025-05-08 02:16:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 02:16:17] Checking for apptainer binary...
[2025-05-08 02:16:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 02:16:17] Running /usr/bin/apptainer --version
[2025-05-08 02:16:17] apptainer version 1.3.2-1.el7
[2025-05-08 02:16:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 05:44:50] cg-vwn315.simple-grid.lan
[2025-05-08 05:44:50] apptainer works
[2025-05-08 05:44:50] Set ATHENA_PROC_NUMBER=8
[2025-05-08 05:44:50] Set ATHENA_CORE_NUMBER=8
[2025-05-08 05:44:50] Starting ATLAS job with PandaID=6636685938
[2025-05-08 05:44:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 11:16:25]  *** The last 200 lines of the pilot log: ***
[2025-05-08 11:16:25] 2025-05-08 07:37:10,897 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 11:16:25] 2025-05-08 07:37:10,897 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 11:16:25] 2025-05-08 07:37:10,897 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 11:16:25] 2025-05-08 07:37:10,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 11:16:25] 2025-05-08 07:37:10,902 | INFO     | fitting pss+swap vs Time
[2025-05-08 11:16:25] 2025-05-08 07:37:10,903 | INFO     | sum of square deviations: 3579276412.5
[2025-05-08 11:16:25] 2025-05-08 07:37:10,905 | INFO     | sum of deviations: 81805971530.50002
[2025-05-08 11:16:25] 2025-05-08 07:37:10,905 | INFO     | mean x: 1746682809.5
[2025-05-08 11:16:25] 2025-05-08 07:37:10,905 | INFO     | mean y: 2432154.3141592923
[2025-05-08 11:16:25] 2025-05-08 07:37:10,905 | INFO     | -- intersect: -39918788706.906715
[2025-05-08 11:16:25] 2025-05-08 07:37:10,905 | INFO     | intersect: -39918788706.906715
[2025-05-08 11:16:25] 2025-05-08 07:37:10,906 | INFO     | chi2: 5.016672218645735
[2025-05-08 11:16:25] 2025-05-08 07:37:10,906 | INFO     | sum of square deviations: 3346927870.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,908 | INFO     | sum of deviations: 94669731715.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,908 | INFO     | mean x: 1746682657.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,908 | INFO     | mean y: 2440420.21719457
[2025-05-08 11:16:25] 2025-05-08 07:37:10,909 | INFO     | -- intersect: -49403458049.12549
[2025-05-08 11:16:25] 2025-05-08 07:37:10,909 | INFO     | intersect: -49403458049.12549
[2025-05-08 11:16:25] 2025-05-08 07:37:10,909 | INFO     | chi2: 4.263700580846447
[2025-05-08 11:16:25] 2025-05-08 07:37:10,909 | INFO     | current chi2=4.263700580846447 (change=15.009384806937906 %)
[2025-05-08 11:16:25] 2025-05-08 07:37:10,909 | INFO     | right removable region: 220
[2025-05-08 11:16:25] 2025-05-08 07:37:10,910 | INFO     | sum of square deviations: 3346927870.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,912 | INFO     | sum of deviations: 25638813986.000015
[2025-05-08 11:16:25] 2025-05-08 07:37:10,912 | INFO     | mean x: 1746682962.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,912 | INFO     | mean y: 2468909.4977375567
[2025-05-08 11:16:25] 2025-05-08 07:37:10,912 | INFO     | -- intersect: -13377825287.052584
[2025-05-08 11:16:25] 2025-05-08 07:37:10,912 | INFO     | intersect: -13377825287.052584
[2025-05-08 11:16:25] 2025-05-08 07:37:10,912 | INFO     | chi2: 2.433649616077301
[2025-05-08 11:16:25] 2025-05-08 07:37:10,913 | INFO     | current chi2=2.433649616077301 (change=51.488765659593525 %)
[2025-05-08 11:16:25] 2025-05-08 07:37:10,919 | INFO     | sum of square deviations: 3124858590.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,921 | INFO     | sum of deviations: -14757902142.000002
[2025-05-08 11:16:25] 2025-05-08 07:37:10,921 | INFO     | mean x: 1746683114.5
[2025-05-08 11:16:25] 2025-05-08 07:37:10,921 | INFO     | mean y: 2496651.9444444445
[2025-05-08 11:16:25] 2025-05-08 07:37:10,921 | INFO     | -- intersect: 8251631047.774748
[2025-05-08 11:16:25] 2025-05-08 07:37:10,922 | INFO     | intersect: 8251631047.774748
[2025-05-08 11:16:25] 2025-05-08 07:37:10,922 | INFO     | chi2: 1.200956785172912
[2025-05-08 11:16:25] 2025-05-08 07:37:10,922 | INFO     | current chi2=1.200956785172912 (change=50.65202577893344 %)
[2025-05-08 11:16:25] 2025-05-08 07:37:10,923 | INFO     | sum of square deviations: 2912836010.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,924 | INFO     | sum of deviations: -28827610579.999992
[2025-05-08 11:16:25] 2025-05-08 07:37:10,925 | INFO     | mean x: 1746683267.0
[2025-05-08 11:16:25] 2025-05-08 07:37:10,925 | INFO     | mean y: 2506659.701421801
[2025-05-08 11:16:25] 2025-05-08 07:37:10,925 | INFO     | -- intersect: 17288994760.92417
[2025-05-08 11:16:25] 2025-05-08 07:37:10,925 | INFO     | intersect: 17288994760.92417
[2025-05-08 11:16:25] 2025-05-08 07:37:10,925 | INFO     | chi2: 0.9100221323869924
[2025-05-08 11:16:25] 2025-05-08 07:37:10,925 | INFO     | current chi2=0.9100221323869924 (change=24.225239107503043 %)
[2025-05-08 11:16:25] 2025-05-08 07:37:10,926 | INFO     | left removable region: 30
[2025-05-08 11:16:25] 2025-05-08 07:37:10,926 | INFO     | sum of square deviations: 2126802667.5
[2025-05-08 11:16:25] 2025-05-08 07:37:10,927 | INFO     | sum of deviations: 4055130427.9999995
[2025-05-08 11:16:25] 2025-05-08 07:37:10,927 | INFO     | mean x: 1746683541.5
[2025-05-08 11:16:25] 2025-05-08 07:37:10,928 | INFO     | mean y: 2501786.094736842
[2025-05-08 11:16:25] 2025-05-08 07:37:10,928 | INFO     | -- intersect: -3327863407.3763447
[2025-05-08 11:16:25] 2025-05-08 07:37:10,928 | INFO     | intersect: -3327863407.3763447
[2025-05-08 11:16:25] 2025-05-08 07:37:10,928 | INFO     | chi2: 0.00032411513337738567
[2025-05-08 11:16:25] 2025-05-08 07:37:10,928 | INFO     | -- intersect: -3327863407.3763447
[2025-05-08 11:16:25] 2025-05-08 07:37:10,929 | INFO     | current memory leak: 1.91 B/s (using 190 data points, chi2=0.00)
[2025-05-08 11:16:25] 2025-05-08 07:37:10,929 | INFO     | ..............................
[2025-05-08 11:16:25] 2025-05-08 07:37:10,929 | INFO     | . Timing measurements:
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | . get job = 0 s
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | . initial setup = 2 s
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | . payload setup = 8 s
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | . stage-in = 0 s
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | . payload execution = 13782 s
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | . stage-out = 4 s
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | . log creation = 1 s
[2025-05-08 11:16:25] 2025-05-08 07:37:10,930 | INFO     | ..............................
[2025-05-08 11:16:25] 2025-05-08 07:37:11,105 | INFO     | 
[2025-05-08 11:16:25] 2025-05-08 07:37:11,105 | INFO     | job summary report
[2025-05-08 11:16:25] 2025-05-08 07:37:11,105 | INFO     | --------------------------------------------------
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | PanDA job id: 6636685938
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | task id: 44506063
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | errors: (none)
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | pilot state: finished 
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | transexitcode: 0
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | exeerrorcode: 0
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | exeerrordiag: 
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | exitcode: 0
[2025-05-08 11:16:25] 2025-05-08 07:37:11,106 | INFO     | exitmsg: OK
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | cpuconsumptiontime: 58166 s
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | nevents: 400
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | neventsw: 0
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | pid: 7181
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | pgrp: 7181
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | corecount: 8
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | event service: False
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | sizes: {0: 2393739, 1: 2393767, 6: 2393973, 12: 2394001, 13795: 2423655, 13801: 2432598, 13802: 2432782, 13904: 2432952}
[2025-05-08 11:16:25] 2025-05-08 07:37:11,107 | INFO     | --------------------------------------------------
[2025-05-08 11:16:25] 2025-05-08 07:37:11,108 | INFO     | 
[2025-05-08 11:16:25] 2025-05-08 07:37:11,108 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-05-08 11:16:25] 2025-05-08 07:37:11,622 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,623 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,623 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,623 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,623 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,623 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,623 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 11:16:25] 2025-05-08 07:37:11,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,625 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 11:16:25] 2025-05-08 07:37:11,625 | INFO     | job 6636685938 has completed (purged errors)
[2025-05-08 11:16:25] 2025-05-08 07:37:11,625 | INFO     | overall cleanup function is called
[2025-05-08 11:16:25] 2025-05-08 07:37:11,964 | INFO     | PID=723 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-05-08 11:16:25] 2025-05-08 07:37:11,964 | INFO     | .. there are 2 such processes running
[2025-05-08 11:16:25] 2025-05-08 07:37:12,634 | INFO     | --- collectZombieJob: --- 10, [7181]
[2025-05-08 11:16:25] 2025-05-08 07:37:12,634 | INFO     | zombie collector waiting for pid 7181
[2025-05-08 11:16:25] 2025-05-08 07:37:12,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 11:16:25] 2025-05-08 07:37:12,635 | INFO     | collected zombie processes
[2025-05-08 11:16:25] 2025-05-08 07:37:12,635 | INFO     | will attempt to kill all subprocesses of pid=7181
[2025-05-08 11:16:25] 2025-05-08 07:37:12,730 | INFO     | process IDs to be killed: [7181] (in reverse order)
[2025-05-08 11:16:25] 2025-05-08 07:37:12,798 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 11:16:25] 2025-05-08 07:37:12,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 11:16:25] 2025-05-08 07:37:12,800 | INFO     | did not find any defunct processes belonging to 7181
[2025-05-08 11:16:25] 2025-05-08 07:37:12,802 | INFO     | did not find any defunct processes belonging to 7181
[2025-05-08 11:16:25] 2025-05-08 07:37:12,803 | INFO     | ready for new job
[2025-05-08 11:16:25] 2025-05-08 07:37:12,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 11:16:25] 2025-05-08 07:37:12,805 | INFO     | **************************************
[2025-05-08 11:16:25] 2025-05-08 07:37:12,805 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 11:16:25] 2025-05-08 07:37:12,805 | INFO     | **************************************
[2025-05-08 11:16:25] 2025-05-08 07:37:12,806 | INFO     | 
[2025-05-08 11:16:25] 2025-05-08 07:37:12,806 | INFO     | pilot is running in a VM
[2025-05-08 11:16:25] 2025-05-08 07:37:12,806 | INFO     | architecture information:
[2025-05-08 11:16:25] 2025-05-08 07:37:12,807 | INFO     | executing command: cat /etc/os-release
[2025-05-08 11:16:25] 2025-05-08 07:37:13,024 | INFO     | cat /etc/os-release:
[2025-05-08 11:16:25] NAME="CentOS Linux"
[2025-05-08 11:16:25] VERSION="7 (Core)"
[2025-05-08 11:16:25] ID="centos"
[2025-05-08 11:16:25] ID_LIKE="rhel fedora"
[2025-05-08 11:16:25] VERSION_ID="7"
[2025-05-08 11:16:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 11:16:25] ANSI_COLOR="0;31"
[2025-05-08 11:16:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 11:16:25] HOME_URL="https://www.centos.org/"
[2025-05-08 11:16:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 11:16:25] 
[2025-05-08 11:16:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 11:16:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 11:16:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 11:16:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 11:16:25] 
[2025-05-08 11:16:25] 2025-05-08 07:37:13,025 | INFO     | **************************************
[2025-05-08 11:16:25] 2025-05-08 07:37:13,528 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-05-08 11:16:25] 2025-05-08 07:37:13,736 | INFO     | sufficient remaining disk space (496551067648 B)
[2025-05-08 11:16:25] 2025-05-08 07:37:13,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 11:16:25] 2025-05-08 07:37:13,737 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 11:16:25] 2025-05-08 07:37:13,737 | INFO     | update_server=False
[2025-05-08 11:16:25] 2025-05-08 07:37:13,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 11:16:25] 2025-05-08 07:37:13,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 11:16:25] 2025-05-08 07:37:13,737 | INFO     | aborting loop
[2025-05-08 11:16:25] 2025-05-08 07:37:13,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 11:16:25] 2025-05-08 07:37:13,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 11:16:25] 2025-05-08 07:37:13,899 | INFO     | all data control threads have been joined
[2025-05-08 11:16:25] 2025-05-08 07:37:13,970 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 11:16:25] 2025-05-08 07:37:13,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 11:16:25] 2025-05-08 07:37:13,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 11:16:25] 2025-05-08 07:37:14,035 | INFO     | all payload control threads have been joined
[2025-05-08 11:16:25] 2025-05-08 07:37:14,743 | INFO     | [job] retrieve thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:14,744 | INFO     | [job] job monitor thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:14,778 | INFO     | [payload] failed_post thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:14,905 | INFO     | [data] control thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,015 | INFO     | [data] copytool_in thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,041 | INFO     | [payload] control thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,321 | INFO     | [job] validate thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,397 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,452 | INFO     | all job control threads have been joined
[2025-05-08 11:16:25] 2025-05-08 07:37:15,631 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,722 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,887 | INFO     | [payload] validate_post thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:15,888 | INFO     | [data] copytool_out thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:16,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 11:16:25] 2025-05-08 07:37:16,458 | INFO     | [job] control thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:17,126 | INFO     | [job] queue monitor thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:17,896 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 11:16:25] 2025-05-08 07:37:19,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417835636544)>', '<ExcThread(monitor, started 140417177745152)>']
[2025-05-08 11:16:25] 2025-05-08 07:37:20,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 11:16:25] 2025-05-08 07:37:20,006 | INFO     | [monitor] control thread has ended
[2025-05-08 11:16:25] 2025-05-08 07:37:24,623 | INFO     | all workflow threads have been joined
[2025-05-08 11:16:25] 2025-05-08 07:37:24,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 11:16:25] 2025-05-08 07:37:24,624 | INFO     | traces error code: 0
[2025-05-08 11:16:25] 2025-05-08 07:37:24,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 11:16:25] 2025-05-08 07:37:24,939 [wrapper] ==== pilot stdout END ====
[2025-05-08 11:16:25] 2025-05-08 07:37:25,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 11:16:25] 2025-05-08 07:37:25,071 [wrapper] pilotpid: 723
[2025-05-08 11:16:25] 2025-05-08 07:37:25,113 [wrapper] Pilot exit status: 0
[2025-05-08 11:16:25] 2025-05-08 07:37:25,591 [wrapper] pandaids: 6636685938
[2025-05-08 11:16:25] 2025-05-08 07:37:26,238 [wrapper] cleanup supervisor_pilot 17786 724
[2025-05-08 11:16:25] 2025-05-08 07:37:26,342 [wrapper] Test setup, not cleaning
[2025-05-08 11:16:25] 2025-05-08 07:37:26,453 [wrapper] apfmon messages muted
[2025-05-08 11:16:25] 2025-05-08 07:37:26,558 [wrapper] ==== wrapper stdout END ====
[2025-05-08 11:16:25] 2025-05-08 07:37:26,663 [wrapper] ==== wrapper stderr END ====
[2025-05-08 11:16:25]  *** Error codes and diagnostics ***
[2025-05-08 11:16:25]     "exeErrorCode": 0,
[2025-05-08 11:16:25]     "exeErrorDiag": "",
[2025-05-08 11:16:25]     "pilotErrorCode": 0,
[2025-05-08 11:16:25]     "pilotErrorDiag": "",
[2025-05-08 11:16:25]  *** Listing of results directory ***
[2025-05-08 11:16:25] total 422224
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc    495897 May  7 08:17 pilot3.tar.gz
[2025-05-08 11:16:25] -rwx------. 1 boinc boinc     37140 May  7 08:28 runpilot2-wrapper.sh
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc      5111 May  7 08:28 queuedata.json
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc       100 May  8 02:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 11:16:25] -rwxr-xr-x. 1 boinc boinc      7986 May  8 02:16 run_atlas
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc       105 May  8 02:16 job.xml
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc      6368 May  8 02:16 init_data.xml
[2025-05-08 11:16:25] -rw-r--r--. 2 boinc boinc 227409180 May  8 02:16 EVNT.44506061._001369.pool.root.1
[2025-05-08 11:16:25] -rw-r--r--. 2 boinc boinc     17569 May  8 02:16 start_atlas.sh
[2025-05-08 11:16:25] drwxrwx--x. 2 boinc boinc        68 May  8 02:16 shared
[2025-05-08 11:16:25] -rw-r--r--. 2 boinc boinc    508878 May  8 02:16 input.tar.gz
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc         0 May  8 02:16 boinc_lockfile
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc      2557 May  8 05:44 pandaJob.out
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc       424 May  8 05:44 setup.sh.local
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc    996844 May  8 05:45 agis_schedconf.cvmfs.json
[2025-05-08 11:16:25] drwx------. 4 boinc boinc      4096 May  8 05:45 pilot3
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc 197898218 May  8 09:34 HITS.44506063._034940.pool.root.1
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc       530 May  8 09:34 boinc_task_state.xml
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc      1021 May  8 09:35 memory_monitor_summary.json
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc   1596741 May  8 09:35 agis_ddmendpoints.agis.ALL.json
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc    398664 May  8 09:35 log.44506063._034940.job.log.tgz.1
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc        95 May  8 09:36 pilot_heartbeat.json
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc      7686 May  8 09:37 heartbeat.json
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc      4417 May  8 09:37 pilotlog.txt
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc   1209734 May  8 09:37 log.44506063._034940.job.log.1
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc       357 May  8 09:37 output.list
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc       620 May  8 09:37 runtime_log
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc   1628160 May  8 09:37 result.tar.gz
[2025-05-08 11:16:25] -rw-------. 1 boinc boinc       657 May  8 09:37 WHnKDmDSnW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm965LDmrddPJo.diag
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc     11031 May  8 09:37 runtime_log.err
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc      8192 May  8 11:16 boinc_mmap_file
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc        28 May  8 11:16 wrapper_checkpoint.txt
[2025-05-08 11:16:25] -rw-r--r--. 1 boinc boinc     20539 May  8 11:16 stderr.txt
[2025-05-08 11:16:26] HITS file was successfully produced:
[2025-05-08 11:16:26] -rw-------. 1 boinc boinc 197898218 May  8 09:34 shared/HITS.pool.root.1
[2025-05-08 11:16:26]  *** Contents of shared directory: ***
[2025-05-08 11:16:26] total 417452
[2025-05-08 11:16:26] -rw-r--r--. 2 boinc boinc 227409180 May  8 02:16 ATLAS.root_0
[2025-05-08 11:16:26] -rw-r--r--. 2 boinc boinc     17569 May  8 02:16 start_atlas.sh
[2025-05-08 11:16:26] -rw-r--r--. 2 boinc boinc    508878 May  8 02:16 input.tar.gz
[2025-05-08 11:16:26] -rw-------. 1 boinc boinc 197898218 May  8 09:34 HITS.pool.root.1
[2025-05-08 11:16:26] -rw-------. 1 boinc boinc   1628160 May  8 09:37 result.tar.gz
11:16:27 (14386): run_atlas exited; CPU time 58283.700504
11:16:27 (14386): called boinc_finish(0)

</stderr_txt>
]]>

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