Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:03:20 (1123110): wrapper (7.7.26015): starting
05:03:20 (1123110): wrapper: running run_atlas (--nthreads 3)
[2025-05-08 05:03:20] Arguments: --nthreads 3
[2025-05-08 05:03:20] Threads: 3
[2025-05-08 05:03:20] Checking for CVMFS
[2025-05-08 05:03:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 05:03:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 05:03:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 05:03:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 05:03:20] 2.9.2.0 14735 4049 83408 145733 3 56 30986767 36864001 0 130560 0 2872853 99.990 1023846 8627 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-08 05:03:20] CVMFS is ok
[2025-05-08 05:03:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-08 05:03:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-08 05:03:20] Further information can be found at the LHC@home message board.
[2025-05-08 05:03:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 05:03:20] Checking for apptainer binary...
[2025-05-08 05:03:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 05:03:20] Running /usr/bin/apptainer --version
[2025-05-08 05:03:20] apptainer version 1.3.6-6.1
[2025-05-08 05:03:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 05:03:20] magicA232
[2025-05-08 05:03:20] apptainer works
[2025-05-08 05:03:20] Set ATHENA_PROC_NUMBER=3
[2025-05-08 05:03:20] Set ATHENA_CORE_NUMBER=3
[2025-05-08 05:03:20] Starting ATLAS job with PandaID=6636745286
[2025-05-08 05:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 06:40:46]  *** The last 200 lines of the pilot log: ***
[2025-05-08 06:40:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-08 06:40:46]  is_altstaged=None
[2025-05-08 06:40:46]  is_tar=False
[2025-05-08 06:40:46]  lfn=log.44506063._038424.job.log.tgz.1
[2025-05-08 06:40:46]  mtime=0
[2025-05-08 06:40:46]  protocol_id=None
[2025-05-08 06:40:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-08 06:40:46]  replicas=None
[2025-05-08 06:40:46]  scope=mc23_13p6TeV
[2025-05-08 06:40:46]  status=None
[2025-05-08 06:40:46]  status_code=0
[2025-05-08 06:40:46]  storage_token=
[2025-05-08 06:40:46]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6636745286/log.44506063._038424.job.log.tgz.1
[2025-05-08 06:40:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/03/log.44506063._038424.job.log.tgz.1
[2025-05-08 06:40:46]  workdir=None
[2025-05-08 06:40:46] ]
[2025-05-08 06:40:46] 2025-05-08 04:40:19,745 | INFO     | transferring file log.44506063._038424.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6636745286/log.44506063._038424.job.log.tgz.1 to /local/data/boinc/
[2025-05-08 06:40:46] 2025-05-08 04:40:19,745 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6636745286/log.44506063._038424.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0384
[2025-05-08 06:40:46] 2025-05-08 04:40:19,758 | INFO     | adding to output.list: log.44506063._038424.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/03/log.44506063._038424.job.log.tg
[2025-05-08 06:40:46] 2025-05-08 04:40:19,758 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-08 06:40:46] 2025-05-08 04:40:19,758 | INFO     | summary of transferred files:
[2025-05-08 06:40:46] 2025-05-08 04:40:19,759 | INFO     |  -- lfn=log.44506063._038424.job.log.tgz.1, status_code=0, status=transferred
[2025-05-08 06:40:46] 2025-05-08 04:40:19,759 | INFO     | stage-out finished correctly
[2025-05-08 06:40:46] 2025-05-08 04:40:20,525 | INFO     | PID=1126755 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-08 06:40:46] 2025-05-08 04:40:21,627 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-08 06:40:46] 2025-05-08 04:40:22,248 | WARNING  | process 1133190 can no longer be monitored (due to stat problems) - aborting
[2025-05-08 06:40:46] 2025-05-08 04:40:22,248 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6636745286/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 06:40:46] 2025-05-08 04:40:22,283 | INFO     | number of running child processes to parent process 1133190: 1
[2025-05-08 06:40:46] 2025-05-08 04:40:22,284 | INFO     | maximum number of monitored processes: 6
[2025-05-08 06:40:46] 2025-05-08 04:40:24,113 | INFO     | job 6636745286 has state=finished
[2025-05-08 06:40:46] 2025-05-08 04:40:24,114 | INFO     | preparing for final server update for job 6636745286 in state='finished'
[2025-05-08 06:40:46] 2025-05-08 04:40:24,114 | INFO     | this job has now completed (state=finished)
[2025-05-08 06:40:46] 2025-05-08 04:40:24,114 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-08 06:40:46] 2025-05-08 04:40:24,114 | INFO     | log transfer has been attempted: DONE
[2025-05-08 06:40:46] 2025-05-08 04:40:24,114 | INFO     | job 6636745286 has finished - writing final server update
[2025-05-08 06:40:46] 2025-05-08 04:40:24,114 | INFO     | total number of processed events: 400 (read)
[2025-05-08 06:40:46] 2025-05-08 04:40:24,115 | INFO     | executing command: lscpu
[2025-05-08 06:40:46] 2025-05-08 04:40:24,133 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-08 06:40:46] 2025-05-08 04:40:24,787 | INFO     | monitor loop #446: job 0:6636745286 is in state 'finished'
[2025-05-08 06:40:46] 2025-05-08 04:40:24,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-08 06:40:46] 2025-05-08 04:40:26,543 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-08 06:40:46] 2025-05-08 04:40:26,544 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6636745286/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 06:40:46] 2025-05-08 04:40:26,544 | INFO     | extracted standard info from prmon json
[2025-05-08 06:40:46] 2025-05-08 04:40:26,544 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 06:40:46] 2025-05-08 04:40:26,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 06:40:46] 2025-05-08 04:40:26,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 06:40:46] 2025-05-08 04:40:26,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 06:40:46] 2025-05-08 04:40:26,545 | INFO     | fitting pss+swap vs Time
[2025-05-08 06:40:46] 2025-05-08 04:40:26,545 | INFO     | sum of square deviations: 211285822.0
[2025-05-08 06:40:46] 2025-05-08 04:40:26,545 | INFO     | sum of deviations: 14792348262.499998
[2025-05-08 06:40:46] 2025-05-08 04:40:26,545 | INFO     | mean x: 1746676384.5
[2025-05-08 06:40:46] 2025-05-08 04:40:26,545 | INFO     | mean y: 2303169.9431818184
[2025-05-08 06:40:46] 2025-05-08 04:40:26,545 | INFO     | -- intersect: -122284394237.55421
[2025-05-08 06:40:46] 2025-05-08 04:40:26,545 | INFO     | intersect: -122284394237.55421
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | chi2: 1.0079186884389002
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | -- intersect: -122284394237.55421
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | current memory leak: 70.01 B/s (using 88 data points, chi2=1.01)
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | ..............................
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . Timing measurements:
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . get job = 0 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . initial setup = 1 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . payload setup = 3 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . stage-in = 0 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . payload execution = 5793 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . stage-out = 0 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | . log creation = 0 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,546 | INFO     | ..............................
[2025-05-08 06:40:46] 2025-05-08 04:40:26,576 | INFO     | 
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | job summary report
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | --------------------------------------------------
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | PanDA job id: 6636745286
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | task id: 44506063
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | errors: (none)
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | pilot state: finished 
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | transexitcode: 0
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | exeerrorcode: 0
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | exeerrordiag: 
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | exitcode: 0
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | exitmsg: OK
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | cpuconsumptiontime: 15520 s
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | nevents: 400
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | neventsw: 0
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | pid: 1133190
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | pgrp: 1133190
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | corecount: 3
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | event service: False
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | sizes: {0: 2393740, 3: 2393946, 11: 2393974, 5800: 2420658, 5801: 2429605, 5802: 2429661, 5807: 2429959}
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | --------------------------------------------------
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | 
[2025-05-08 06:40:46] 2025-05-08 04:40:26,577 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 06:40:46] 2025-05-08 04:40:26,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | job 6636745286 has completed (purged errors)
[2025-05-08 06:40:46] 2025-05-08 04:40:26,590 | INFO     | overall cleanup function is called
[2025-05-08 06:40:46] 2025-05-08 04:40:27,597 | INFO     | --- collectZombieJob: --- 10, [1133190]
[2025-05-08 06:40:46] 2025-05-08 04:40:27,597 | INFO     | zombie collector waiting for pid 1133190
[2025-05-08 06:40:46] 2025-05-08 04:40:27,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 06:40:46] 2025-05-08 04:40:27,597 | INFO     | collected zombie processes
[2025-05-08 06:40:46] 2025-05-08 04:40:27,597 | INFO     | will attempt to kill all subprocesses of pid=1133190
[2025-05-08 06:40:46] 2025-05-08 04:40:27,638 | INFO     | process IDs to be killed: [1133190] (in reverse order)
[2025-05-08 06:40:46] 2025-05-08 04:40:27,662 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 06:40:46] 2025-05-08 04:40:27,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 06:40:46] 2025-05-08 04:40:27,664 | INFO     | did not find any defunct processes belonging to 1133190
[2025-05-08 06:40:46] 2025-05-08 04:40:27,664 | INFO     | did not find any defunct processes belonging to 1133190
[2025-05-08 06:40:46] 2025-05-08 04:40:27,665 | INFO     | ready for new job
[2025-05-08 06:40:46] 2025-05-08 04:40:27,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 06:40:46] 2025-05-08 04:40:27,665 | INFO     | **************************************
[2025-05-08 06:40:46] 2025-05-08 04:40:27,665 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 06:40:46] 2025-05-08 04:40:27,665 | INFO     | **************************************
[2025-05-08 06:40:46] 2025-05-08 04:40:27,665 | INFO     | 
[2025-05-08 06:40:46] 2025-05-08 04:40:27,666 | INFO     | architecture information:
[2025-05-08 06:40:46] 2025-05-08 04:40:27,666 | INFO     | executing command: cat /etc/os-release
[2025-05-08 06:40:46] 2025-05-08 04:40:27,675 | INFO     | cat /etc/os-release:
[2025-05-08 06:40:46] NAME="CentOS Linux"
[2025-05-08 06:40:46] VERSION="7 (Core)"
[2025-05-08 06:40:46] ID="centos"
[2025-05-08 06:40:46] ID_LIKE="rhel fedora"
[2025-05-08 06:40:46] VERSION_ID="7"
[2025-05-08 06:40:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 06:40:46] ANSI_COLOR="0;31"
[2025-05-08 06:40:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 06:40:46] HOME_URL="https://www.centos.org/"
[2025-05-08 06:40:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 06:40:46] 
[2025-05-08 06:40:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 06:40:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 06:40:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 06:40:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 06:40:46] 
[2025-05-08 06:40:46] 2025-05-08 04:40:27,675 | INFO     | **************************************
[2025-05-08 06:40:46] 2025-05-08 04:40:28,179 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 06:40:46] 2025-05-08 04:40:28,192 | INFO     | sufficient remaining disk space (369032691712 B)
[2025-05-08 06:40:46] 2025-05-08 04:40:28,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 06:40:46] 2025-05-08 04:40:28,193 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 06:40:46] 2025-05-08 04:40:28,193 | INFO     | update_server=False
[2025-05-08 06:40:46] 2025-05-08 04:40:28,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 06:40:46] 2025-05-08 04:40:28,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 06:40:46] 2025-05-08 04:40:28,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 06:40:46] 2025-05-08 04:40:28,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 06:40:46] 2025-05-08 04:40:28,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 06:40:46] 2025-05-08 04:40:28,296 | INFO     | aborting loop
[2025-05-08 06:40:46] 2025-05-08 04:40:28,547 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 06:40:46] 2025-05-08 04:40:28,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 06:40:46] 2025-05-08 04:40:28,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 06:40:46] 2025-05-08 04:40:28,877 | INFO     | all job control threads have been joined
[2025-05-08 06:40:46] 2025-05-08 04:40:29,179 | INFO     | all data control threads have been joined
[2025-05-08 06:40:46] 2025-05-08 04:40:29,198 | INFO     | [job] retrieve thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:29,199 | INFO     | [job] queue monitor thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:29,302 | INFO     | [job] job monitor thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:29,462 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:29,475 | INFO     | [payload] failed_post thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:29,501 | INFO     | all payload control threads have been joined
[2025-05-08 06:40:46] 2025-05-08 04:40:29,731 | INFO     | [data] copytool_in thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:29,883 | INFO     | [job] control thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:30,034 | INFO     | [job] validate thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:30,095 | INFO     | [payload] validate_post thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:30,122 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:30,127 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:30,185 | INFO     | [data] control thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:30,199 | INFO     | [data] copytool_out thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:30,507 | INFO     | [payload] control thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:32,200 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:38,902 | INFO     | job.realtimelogging is not enabled
[2025-05-08 06:40:46] 2025-05-08 04:40:39,908 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 06:40:46] 2025-05-08 04:40:41,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629027702592)>', '<ExcThread(monitor, started 139628304656128)>']
[2025-05-08 06:40:46] 2025-05-08 04:40:41,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 06:40:46] 2025-05-08 04:40:41,616 | INFO     | [monitor] control thread has ended
[2025-05-08 06:40:46] 2025-05-08 04:40:46,221 | INFO     | all workflow threads have been joined
[2025-05-08 06:40:46] 2025-05-08 04:40:46,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 06:40:46] 2025-05-08 04:40:46,222 | INFO     | traces error code: 0
[2025-05-08 06:40:46] 2025-05-08 04:40:46,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 06:40:46] 2025-05-08 04:40:46,273 [wrapper] ==== pilot stdout END ====
[2025-05-08 06:40:46] 2025-05-08 04:40:46,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 06:40:46] 2025-05-08 04:40:46,278 [wrapper] pilotpid: 1126755
[2025-05-08 06:40:46] 2025-05-08 04:40:46,281 [wrapper] Pilot exit status: 0
[2025-05-08 06:40:46] 2025-05-08 04:40:46,288 [wrapper] pandaids: 6636745286
[2025-05-08 06:40:46] 2025-05-08 04:40:46,305 [wrapper] cleanup supervisor_pilot 1145212 1126756
[2025-05-08 06:40:46] 2025-05-08 04:40:46,307 [wrapper] Test setup, not cleaning
[2025-05-08 06:40:46] 2025-05-08 04:40:46,310 [wrapper] apfmon messages muted
[2025-05-08 06:40:46] 2025-05-08 04:40:46,312 [wrapper] ==== wrapper stdout END ====
[2025-05-08 06:40:46] 2025-05-08 04:40:46,315 [wrapper] ==== wrapper stderr END ====
[2025-05-08 06:40:46]  *** Error codes and diagnostics ***
[2025-05-08 06:40:46]     "exeErrorCode": 0,
[2025-05-08 06:40:46]     "exeErrorDiag": "",
[2025-05-08 06:40:46]     "pilotErrorCode": 0,
[2025-05-08 06:40:46]     "pilotErrorDiag": "",
[2025-05-08 06:40:46]  *** Listing of results directory ***
[2025-05-08 06:40:46] total 422044
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc      5111 May  7 13:47 queuedata.json
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc    495897 May  7 13:47 pilot3.tar.gz
[2025-05-08 06:40:46] -rwx------ 1 boinc boinc     37140 May  7 13:49 runpilot2-wrapper.sh
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc       100 May  8 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 06:40:46] -rwxr-xr-x 1 boinc boinc      7986 May  8 05:03 run_atlas
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc       105 May  8 05:03 job.xml
[2025-05-08 06:40:46] -rw-r--r-- 2 boinc boinc 225353356 May  8 05:03 EVNT.44506061._001509.pool.root.1
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc      6931 May  8 05:03 init_data.xml
[2025-05-08 06:40:46] drwxrwx--x 2 boinc boinc      4096 May  8 05:03 shared
[2025-05-08 06:40:46] -rw-r--r-- 2 boinc boinc    508882 May  8 05:03 input.tar.gz
[2025-05-08 06:40:46] -rw-r--r-- 2 boinc boinc     17569 May  8 05:03 start_atlas.sh
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc         0 May  8 05:03 boinc_lockfile
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc      2557 May  8 05:03 pandaJob.out
[2025-05-08 06:40:46] -rw------- 1 boinc boinc       424 May  8 05:03 setup.sh.local
[2025-05-08 06:40:46] -rw------- 1 boinc boinc    996852 May  8 05:03 agis_schedconf.cvmfs.json
[2025-05-08 06:40:46] -rw------- 1 boinc boinc   1596741 May  8 05:03 agis_ddmendpoints.agis.ALL.json
[2025-05-08 06:40:46] drwx------ 4 boinc boinc      4096 May  8 05:03 pilot3
[2025-05-08 06:40:46] -rw------- 1 boinc boinc        95 May  8 06:39 pilot_heartbeat.json
[2025-05-08 06:40:46] -rw------- 1 boinc boinc 201404970 May  8 06:40 HITS.44506063._038424.pool.root.1
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc       530 May  8 06:40 boinc_task_state.xml
[2025-05-08 06:40:46] -rw------- 1 boinc boinc      1017 May  8 06:40 memory_monitor_summary.json
[2025-05-08 06:40:46] -rw------- 1 boinc boinc    226580 May  8 06:40 log.44506063._038424.job.log.tgz.1
[2025-05-08 06:40:46] -rw------- 1 boinc boinc      7650 May  8 06:40 heartbeat.json
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc      8192 May  8 06:40 boinc_mmap_file
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc        27 May  8 06:40 wrapper_checkpoint.txt
[2025-05-08 06:40:46] -rw------- 1 boinc boinc      4429 May  8 06:40 pilotlog.txt
[2025-05-08 06:40:46] -rw------- 1 boinc boinc    557243 May  8 06:40 log.44506063._038424.job.log.1
[2025-05-08 06:40:46] -rw------- 1 boinc boinc       357 May  8 06:40 output.list
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc       620 May  8 06:40 runtime_log
[2025-05-08 06:40:46] -rw------- 1 boinc boinc    798720 May  8 06:40 result.tar.gz
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc     11114 May  8 06:40 runtime_log.err
[2025-05-08 06:40:46] -rw------- 1 boinc boinc       661 May  8 06:40 nMCMDmNSsW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm0JILDmJoNoYm.diag
[2025-05-08 06:40:46] -rw-r--r-- 1 boinc boinc     21439 May  8 06:40 stderr.txt
[2025-05-08 06:40:46] HITS file was successfully produced:
[2025-05-08 06:40:46] -rw------- 1 boinc boinc 201404970 May  8 06:40 shared/HITS.pool.root.1
[2025-05-08 06:40:46]  *** Contents of shared directory: ***
[2025-05-08 06:40:46] total 418068
[2025-05-08 06:40:46] -rw-r--r-- 2 boinc boinc 225353356 May  8 05:03 ATLAS.root_0
[2025-05-08 06:40:46] -rw-r--r-- 2 boinc boinc    508882 May  8 05:03 input.tar.gz
[2025-05-08 06:40:46] -rw-r--r-- 2 boinc boinc     17569 May  8 05:03 start_atlas.sh
[2025-05-08 06:40:46] -rw------- 1 boinc boinc 201404970 May  8 06:40 HITS.pool.root.1
[2025-05-08 06:40:46] -rw------- 1 boinc boinc    798720 May  8 06:40 result.tar.gz
06:40:47 (1123110): run_atlas exited; CPU time 15539.958966
06:40:47 (1123110): called boinc_finish(0)

</stderr_txt>
]]>

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