Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:31:39 (28973): wrapper (7.7.26015): starting
08:31:39 (28973): wrapper: running run_atlas (--nthreads 8)
[2025-05-07 08:31:39] Arguments: --nthreads 8
[2025-05-07 08:31:39] Threads: 8
[2025-05-07 08:31:39] Checking for CVMFS
[2025-05-07 08:31:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 08:31:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 08:31:39] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 08:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 08:31:40] 2.11.2.0 3761 277111 231348 145712 2 58 18235530 20275200 917 130560 0 77453870 99.994 12713792 53065 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-07 08:31:40] CVMFS is ok
[2025-05-07 08:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-07 08:31:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-07 08:31:40] Further information can be found at the LHC@home message board.
[2025-05-07 08:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 08:31:40] Checking for apptainer binary...
[2025-05-07 08:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 08:31:40] Running /usr/bin/apptainer --version
[2025-05-07 08:31:40] apptainer version 1.3.2-1.el7
[2025-05-07 08:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 08:31:41] c-205-36.aglt2.org
[2025-05-07 08:31:41] apptainer works
[2025-05-07 08:31:41] Set ATHENA_PROC_NUMBER=8
[2025-05-07 08:31:41] Set ATHENA_CORE_NUMBER=8
[2025-05-07 08:31:41] Starting ATLAS job with PandaID=6636444408
[2025-05-07 08:31:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-07 09:53:38]  *** The last 200 lines of the pilot log: ***
[2025-05-07 09:53:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-07 09:53:38]  is_altstaged=None
[2025-05-07 09:53:38]  is_tar=False
[2025-05-07 09:53:38]  lfn=log.44506063._033219.job.log.tgz.1
[2025-05-07 09:53:38]  mtime=0
[2025-05-07 09:53:38]  protocol_id=None
[2025-05-07 09:53:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-07 09:53:38]  replicas=None
[2025-05-07 09:53:38]  scope=mc23_13p6TeV
[2025-05-07 09:53:38]  status=None
[2025-05-07 09:53:38]  status_code=0
[2025-05-07 09:53:38]  storage_token=
[2025-05-07 09:53:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6636444408/log.44506063._033219.job.log.tgz.1
[2025-05-07 09:53:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/63/log.44506063._033219.job.log.tgz.1
[2025-05-07 09:53:38]  workdir=None
[2025-05-07 09:53:38] ]
[2025-05-07 09:53:38] 2025-05-07 13:53:18,176 | INFO     | transferring file log.44506063._033219.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6636444408/log.44506063._033219.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-07 09:53:38] 2025-05-07 13:53:18,176 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6636444408/log.44506063._033219.job.log.tgz.1 /tmp/boinchome/slots/0/log.44506063._033219.job
[2025-05-07 09:53:38] 2025-05-07 13:53:18,196 | INFO     | adding to output.list: log.44506063._033219.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/63/log.44506063._033219.job.log.tg
[2025-05-07 09:53:38] 2025-05-07 13:53:18,197 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-07 09:53:38] 2025-05-07 13:53:18,197 | INFO     | summary of transferred files:
[2025-05-07 09:53:38] 2025-05-07 13:53:18,197 | INFO     |  -- lfn=log.44506063._033219.job.log.tgz.1, status_code=0, status=transferred
[2025-05-07 09:53:38] 2025-05-07 13:53:18,197 | INFO     | stage-out finished correctly
[2025-05-07 09:53:38] 2025-05-07 13:53:18,281 | INFO     | monitor loop #365: job 0:6636444408 is in state 'finished'
[2025-05-07 09:53:38] 2025-05-07 13:53:18,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-07 09:53:38] 2025-05-07 13:53:18,707 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-07 09:53:38] 2025-05-07 13:53:20,239 | INFO     | job 6636444408 has state=finished
[2025-05-07 09:53:38] 2025-05-07 13:53:20,240 | INFO     | preparing for final server update for job 6636444408 in state='finished'
[2025-05-07 09:53:38] 2025-05-07 13:53:20,240 | INFO     | this job has now completed (state=finished)
[2025-05-07 09:53:38] 2025-05-07 13:53:20,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-07 09:53:38] 2025-05-07 13:53:20,241 | INFO     | log transfer has been attempted: DONE
[2025-05-07 09:53:38] 2025-05-07 13:53:20,241 | INFO     | job 6636444408 has finished - writing final server update
[2025-05-07 09:53:38] 2025-05-07 13:53:20,241 | INFO     | total number of processed events: 400 (read)
[2025-05-07 09:53:38] 2025-05-07 13:53:20,243 | INFO     | executing command: lscpu
[2025-05-07 09:53:38] 2025-05-07 13:53:20,280 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-07 09:53:38] 2025-05-07 13:53:20,786 | INFO     | monitor loop #366: job 0:6636444408 is in state 'finished'
[2025-05-07 09:53:38] 2025-05-07 13:53:20,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-07 09:53:38] 2025-05-07 13:53:23,290 | INFO     | monitor loop #367: job 0:6636444408 is in state 'finished'
[2025-05-07 09:53:38] 2025-05-07 13:53:23,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-07 09:53:38] 2025-05-07 13:53:24,420 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-07 09:53:38] 2025-05-07 13:53:24,420 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6636444408/memory_monitor_summary.json (trf name=prmon)
[2025-05-07 09:53:38] 2025-05-07 13:53:24,421 | INFO     | extracted standard info from prmon json
[2025-05-07 09:53:38] 2025-05-07 13:53:24,422 | INFO     | extracted standard memory fields from prmon json
[2025-05-07 09:53:38] 2025-05-07 13:53:24,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-07 09:53:38] 2025-05-07 13:53:24,422 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-07 09:53:38] 2025-05-07 13:53:24,422 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-07 09:53:38] 2025-05-07 13:53:24,425 | INFO     | fitting pss+swap vs Time
[2025-05-07 09:53:38] 2025-05-07 13:53:24,425 | INFO     | sum of square deviations: 120605052.0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,426 | INFO     | sum of deviations: 11466867230.0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,426 | INFO     | mean x: 1746623637.0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,426 | INFO     | mean y: 2503516.835616438
[2025-05-07 09:53:38] 2025-05-07 13:53:24,426 | INFO     | -- intersect: -166062690387.80045
[2025-05-07 09:53:38] 2025-05-07 13:53:24,426 | INFO     | intersect: -166062690387.80045
[2025-05-07 09:53:38] 2025-05-07 13:53:24,427 | INFO     | chi2: 1.9835236420773874
[2025-05-07 09:53:38] 2025-05-07 13:53:24,427 | INFO     | -- intersect: -166062690387.80045
[2025-05-07 09:53:38] 2025-05-07 13:53:24,427 | INFO     | current memory leak: 95.08 B/s (using 73 data points, chi2=1.98)
[2025-05-07 09:53:38] 2025-05-07 13:53:24,427 | INFO     | ..............................
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . Timing measurements:
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . get job = 0 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . initial setup = 2 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . payload setup = 5 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . stage-in = 0 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . payload execution = 4861 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . stage-out = 0 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,428 | INFO     | . log creation = 0 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,429 | INFO     | ..............................
[2025-05-07 09:53:38] 2025-05-07 13:53:24,512 | INFO     | 
[2025-05-07 09:53:38] 2025-05-07 13:53:24,512 | INFO     | job summary report
[2025-05-07 09:53:38] 2025-05-07 13:53:24,512 | INFO     | --------------------------------------------------
[2025-05-07 09:53:38] 2025-05-07 13:53:24,512 | INFO     | PanDA job id: 6636444408
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | task id: 44506063
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | errors: (none)
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | pilot state: finished 
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | transexitcode: 0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | exeerrorcode: 0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | exeerrordiag: 
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | exitcode: 0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,513 | INFO     | exitmsg: OK
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | cpuconsumptiontime: 31815 s
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | nevents: 400
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | neventsw: 0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | pid: 6749
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | pgrp: 6749
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | corecount: 8
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | event service: False
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | sizes: {0: 2392911, 1: 2393767, 5: 2393973, 12: 2394029, 4870: 2420256, 4871: 2429197, 4872: 2429381, 4877: 2429551}
[2025-05-07 09:53:38] 2025-05-07 13:53:24,514 | INFO     | --------------------------------------------------
[2025-05-07 09:53:38] 2025-05-07 13:53:24,515 | INFO     | 
[2025-05-07 09:53:38] 2025-05-07 13:53:24,515 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-07 09:53:38] 2025-05-07 13:53:24,536 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,537 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,537 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-07 09:53:38] 2025-05-07 13:53:24,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-07 09:53:38] 2025-05-07 13:53:24,539 | INFO     | job 6636444408 has completed (purged errors)
[2025-05-07 09:53:38] 2025-05-07 13:53:24,539 | INFO     | overall cleanup function is called
[2025-05-07 09:53:38] 2025-05-07 13:53:25,548 | INFO     | --- collectZombieJob: --- 10, [6749]
[2025-05-07 09:53:38] 2025-05-07 13:53:25,548 | INFO     | zombie collector waiting for pid 6749
[2025-05-07 09:53:38] 2025-05-07 13:53:25,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-07 09:53:38] 2025-05-07 13:53:25,548 | INFO     | collected zombie processes
[2025-05-07 09:53:38] 2025-05-07 13:53:25,548 | INFO     | will attempt to kill all subprocesses of pid=6749
[2025-05-07 09:53:38] 2025-05-07 13:53:25,665 | INFO     | process IDs to be killed: [6749] (in reverse order)
[2025-05-07 09:53:38] 2025-05-07 13:53:25,713 | WARNING  | found no corresponding commands to process id(s)
[2025-05-07 09:53:38] 2025-05-07 13:53:25,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-07 09:53:38] 2025-05-07 13:53:25,717 | INFO     | did not find any defunct processes belonging to 6749
[2025-05-07 09:53:38] 2025-05-07 13:53:25,721 | INFO     | did not find any defunct processes belonging to 6749
[2025-05-07 09:53:38] 2025-05-07 13:53:25,721 | INFO     | ready for new job
[2025-05-07 09:53:38] 2025-05-07 13:53:25,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-07 09:53:38] 2025-05-07 13:53:25,723 | INFO     | **************************************
[2025-05-07 09:53:38] 2025-05-07 13:53:25,723 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-07 09:53:38] 2025-05-07 13:53:25,723 | INFO     | **************************************
[2025-05-07 09:53:38] 2025-05-07 13:53:25,723 | INFO     | 
[2025-05-07 09:53:38] 2025-05-07 13:53:25,725 | INFO     | architecture information:
[2025-05-07 09:53:38] 2025-05-07 13:53:25,725 | INFO     | executing command: cat /etc/os-release
[2025-05-07 09:53:38] 2025-05-07 13:53:25,742 | INFO     | cat /etc/os-release:
[2025-05-07 09:53:38] NAME="CentOS Linux"
[2025-05-07 09:53:38] VERSION="7 (Core)"
[2025-05-07 09:53:38] ID="centos"
[2025-05-07 09:53:38] ID_LIKE="rhel fedora"
[2025-05-07 09:53:38] VERSION_ID="7"
[2025-05-07 09:53:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-07 09:53:38] ANSI_COLOR="0;31"
[2025-05-07 09:53:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-07 09:53:38] HOME_URL="https://www.centos.org/"
[2025-05-07 09:53:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-07 09:53:38] 
[2025-05-07 09:53:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-07 09:53:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-07 09:53:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-07 09:53:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-07 09:53:38] 
[2025-05-07 09:53:38] 2025-05-07 13:53:25,742 | INFO     | **************************************
[2025-05-07 09:53:38] 2025-05-07 13:53:26,245 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-07 09:53:38] 2025-05-07 13:53:26,264 | INFO     | sufficient remaining disk space (32779534336 B)
[2025-05-07 09:53:38] 2025-05-07 13:53:26,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-07 09:53:38] 2025-05-07 13:53:26,265 | INFO     | current server update state: UPDATING_FINAL
[2025-05-07 09:53:38] 2025-05-07 13:53:26,265 | INFO     | update_server=False
[2025-05-07 09:53:38] 2025-05-07 13:53:26,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-07 09:53:38] 2025-05-07 13:53:26,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-07 09:53:38] 2025-05-07 13:53:26,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-07 09:53:38] 2025-05-07 13:53:26,568 | INFO     | all data control threads have been joined
[2025-05-07 09:53:38] 2025-05-07 13:53:26,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-07 09:53:38] 2025-05-07 13:53:26,799 | INFO     | aborting loop
[2025-05-07 09:53:38] 2025-05-07 13:53:26,975 | INFO     | PID=32589 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-07 09:53:38] 2025-05-07 13:53:26,975 | INFO     | .. there are 2 such processes running
[2025-05-07 09:53:38] 2025-05-07 13:53:26,975 | INFO     | found 0 job(s) in 20 queues
[2025-05-07 09:53:38] 2025-05-07 13:53:26,975 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-07 09:53:38] 2025-05-07 13:53:26,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-07 09:53:38] 2025-05-07 13:53:27,271 | INFO     | [job] retrieve thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:27,272 | INFO     | [job] queue monitor thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:27,297 | INFO     | [payload] failed_post thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:27,437 | INFO     | [payload] execute_payloads thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:27,523 | INFO     | all payload control threads have been joined
[2025-05-07 09:53:38] 2025-05-07 13:53:27,574 | INFO     | [data] control thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:27,724 | INFO     | all job control threads have been joined
[2025-05-07 09:53:38] 2025-05-07 13:53:27,786 | INFO     | [job] validate thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:27,804 | INFO     | [job] job monitor thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:27,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:28,122 | INFO     | [payload] validate_post thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:28,272 | INFO     | [data] copytool_out thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:28,317 | INFO     | [job] create_data_payload thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:28,318 | INFO     | [data] copytool_in thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:28,328 | INFO     | [payload] validate_pre thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:28,529 | INFO     | [payload] control thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:28,729 | INFO     | [job] control thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:29,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-07 09:53:38] 2025-05-07 13:53:33,303 | INFO     | [data] queue_monitor thread has finished
[2025-05-07 09:53:38] 2025-05-07 13:53:33,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640515778368)>', '<ExcThread(monitor, started 139640216463104)>']
[2025-05-07 09:53:38] 2025-05-07 13:53:34,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-07 09:53:38] 2025-05-07 13:53:34,010 | INFO     | [monitor] control thread has ended
[2025-05-07 09:53:38] 2025-05-07 13:53:38,676 | INFO     | all workflow threads have been joined
[2025-05-07 09:53:38] 2025-05-07 13:53:38,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-07 09:53:38] 2025-05-07 13:53:38,677 | INFO     | traces error code: 0
[2025-05-07 09:53:38] 2025-05-07 13:53:38,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-07 09:53:38] 2025-05-07 13:53:38,792 [wrapper] ==== pilot stdout END ====
[2025-05-07 09:53:38] 2025-05-07 13:53:38,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-07 09:53:38] 2025-05-07 13:53:38,798 [wrapper] pilotpid: 32589
[2025-05-07 09:53:38] 2025-05-07 13:53:38,801 [wrapper] Pilot exit status: 0
[2025-05-07 09:53:38] 2025-05-07 13:53:38,813 [wrapper] pandaids: 6636444408
[2025-05-07 09:53:38] 2025-05-07 13:53:38,843 [wrapper] cleanup supervisor_pilot 23860 32590
[2025-05-07 09:53:38] 2025-05-07 13:53:38,846 [wrapper] Test setup, not cleaning
[2025-05-07 09:53:38] 2025-05-07 13:53:38,850 [wrapper] apfmon messages muted
[2025-05-07 09:53:38] 2025-05-07 13:53:38,853 [wrapper] ==== wrapper stdout END ====
[2025-05-07 09:53:38] 2025-05-07 13:53:38,856 [wrapper] ==== wrapper stderr END ====
[2025-05-07 09:53:38]  *** Error codes and diagnostics ***
[2025-05-07 09:53:38]     "exeErrorCode": 0,
[2025-05-07 09:53:38]     "exeErrorDiag": "",
[2025-05-07 09:53:38]     "pilotErrorCode": 0,
[2025-05-07 09:53:38]     "pilotErrorDiag": "",
[2025-05-07 09:53:38]  *** Listing of results directory ***
[2025-05-07 09:53:38] total 416740
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas    495897 May  7 00:31 pilot3.tar.gz
[2025-05-07 09:53:38] -rwx------ 1 boincer umatlas     37140 May  7 00:32 runpilot2-wrapper.sh
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas      5111 May  7 00:32 queuedata.json
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas       100 May  7 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-07 09:53:38] -rwxr-xr-x 1 boincer umatlas      7986 May  7 08:31 run_atlas
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas       105 May  7 08:31 job.xml
[2025-05-07 09:53:38] -rw-r--r-- 2 boincer umatlas 223882808 May  7 08:31 EVNT.44506061._001305.pool.root.1
[2025-05-07 09:53:38] -rw-r--r-- 2 boincer umatlas     17569 May  7 08:31 start_atlas.sh
[2025-05-07 09:53:38] drwxrwx--x 2 boincer umatlas      4096 May  7 08:31 shared
[2025-05-07 09:53:38] -rw-r--r-- 2 boincer umatlas    508876 May  7 08:31 input.tar.gz
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas         0 May  7 08:31 boinc_lockfile
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas      2558 May  7 08:31 pandaJob.out
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas       424 May  7 08:31 setup.sh.local
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas    997507 May  7 08:31 agis_schedconf.cvmfs.json
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas   1596741 May  7 08:31 agis_ddmendpoints.agis.ALL.json
[2025-05-07 09:53:38] drwx------ 4 boincer umatlas      4096 May  7 08:31 pilot3
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas      6050 May  7 09:49 init_data.xml
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas        95 May  7 09:52 pilot_heartbeat.json
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas 197433212 May  7 09:52 HITS.44506063._033219.pool.root.1
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas        27 May  7 09:53 wrapper_checkpoint.txt
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas      8192 May  7 09:53 boinc_mmap_file
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas       529 May  7 09:53 boinc_task_state.xml
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas      1047 May  7 09:53 memory_monitor_summary.json
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas    311241 May  7 09:53 log.44506063._033219.job.log.tgz.1
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas      7743 May  7 09:53 heartbeat.json
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas      4745 May  7 09:53 pilotlog.txt
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas    480776 May  7 09:53 log.44506063._033219.job.log.1
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas       357 May  7 09:53 output.list
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas       620 May  7 09:53 runtime_log
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas    808960 May  7 09:53 result.tar.gz
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas     11013 May  7 09:53 runtime_log.err
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas       658 May  7 09:53 e2wNDmudlW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmxqHLDmkRL7nn.diag
[2025-05-07 09:53:38] -rw-r--r-- 1 boincer umatlas     21416 May  7 09:53 stderr.txt
[2025-05-07 09:53:38] HITS file was successfully produced:
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas 197433212 May  7 09:52 shared/HITS.pool.root.1
[2025-05-07 09:53:38]  *** Contents of shared directory: ***
[2025-05-07 09:53:38] total 412760
[2025-05-07 09:53:38] -rw-r--r-- 2 boincer umatlas 223882808 May  7 08:31 ATLAS.root_0
[2025-05-07 09:53:38] -rw-r--r-- 2 boincer umatlas     17569 May  7 08:31 start_atlas.sh
[2025-05-07 09:53:38] -rw-r--r-- 2 boincer umatlas    508876 May  7 08:31 input.tar.gz
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas 197433212 May  7 09:52 HITS.pool.root.1
[2025-05-07 09:53:38] -rw------- 1 boincer umatlas    808960 May  7 09:53 result.tar.gz
09:53:40 (28973): run_atlas exited; CPU time 31825.121009
09:53:40 (28973): called boinc_finish(0)

</stderr_txt>
]]>

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