Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:15:49 (4001664): wrapper (7.7.26015): starting
12:15:49 (4001664): wrapper: running run_atlas (--nthreads 12)
[2025-05-07 12:15:49] Arguments: --nthreads 12
[2025-05-07 12:15:49] Threads: 12
[2025-05-07 12:15:49] Checking for CVMFS
[2025-05-07 12:15:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 12:15:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 12:15:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 12:15:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 12:15:50] 2.11.5.0 2604 10981 204132 145722 0 465 25136339 45568000 13423 130560 0 120651221 99.806 73336962 29873 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-07 12:15:50] CVMFS is ok
[2025-05-07 12:15:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-07 12:15:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-07 12:15:50] Further information can be found at the LHC@home message board.
[2025-05-07 12:15:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 12:15:50] Checking for apptainer binary...
[2025-05-07 12:15:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 12:15:50] Running /usr/bin/apptainer --version
[2025-05-07 12:15:50] apptainer version 1.4.0-1.el9
[2025-05-07 12:15:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 12:15:50] wns0053.triumf.lcg
[2025-05-07 12:15:50] apptainer works
[2025-05-07 12:15:50] Set ATHENA_PROC_NUMBER=12
[2025-05-07 12:15:50] Set ATHENA_CORE_NUMBER=12
[2025-05-07 12:15:50] Starting ATLAS job with PandaID=6636717221
[2025-05-07 12:15:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-07 13:24:21]  *** The last 200 lines of the pilot log: ***
[2025-05-07 13:24:21]  surl=/home/boinc/slots/0/PanDA_Pilot-6636717221/log.44506063._037111.job.log.tgz.1
[2025-05-07 13:24:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/1c/log.44506063._037111.job.log.tgz.1
[2025-05-07 13:24:21]  workdir=None
[2025-05-07 13:24:21] ]
[2025-05-07 13:24:21] 2025-05-07 20:23:57,076 | INFO     | transferring file log.44506063._037111.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6636717221/log.44506063._037111.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-05-07 13:24:21] 2025-05-07 20:23:57,076 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6636717221/log.44506063._037111.job.log.tgz.1 /home/boinc/slots/0/log.44506063._037111.job.log.t
[2025-05-07 13:24:21] 2025-05-07 20:23:57,088 | INFO     | adding to output.list: log.44506063._037111.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/1c/log.44506063._037111.job.log.tg
[2025-05-07 13:24:21] 2025-05-07 20:23:57,089 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-07 13:24:21] 2025-05-07 20:23:57,089 | INFO     | summary of transferred files:
[2025-05-07 13:24:21] 2025-05-07 20:23:57,089 | INFO     |  -- lfn=log.44506063._037111.job.log.tgz.1, status_code=0, status=transferred
[2025-05-07 13:24:21] 2025-05-07 20:23:57,089 | INFO     | stage-out finished correctly
[2025-05-07 13:24:21] 2025-05-07 20:23:58,571 | WARNING  | process 4011582 can no longer be monitored (due to stat problems) - aborting
[2025-05-07 13:24:21] 2025-05-07 20:23:58,571 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6636717221/memory_monitor_summary.json (trf name=prmon)
[2025-05-07 13:24:21] 2025-05-07 20:23:58,572 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6636717221/memory_monitor_summary.json (trf name=prmon)
[2025-05-07 13:24:21] 2025-05-07 20:23:58,572 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4285568 B
[2025-05-07 13:24:21] 2025-05-07 20:23:58,572 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15623 B
[2025-05-07 13:24:21] 2025-05-07 20:23:58,573 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-07 13:24:21] 2025-05-07 20:23:58,585 | INFO     | sufficient remaining disk space (1951203852288 B)
[2025-05-07 13:24:21] 2025-05-07 20:23:58,585 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-07 13:24:21] 2025-05-07 20:23:58,586 | INFO     | size of work directory /home/boinc/slots/0/PanDA_Pilot-6636717221: 4578910 B (within 2537553920 B limit)
[2025-05-07 13:24:21] 2025-05-07 20:23:58,586 | INFO     | pfn file=/home/boinc/slots/0/PanDA_Pilot-6636717221/HITS.44506063._037111.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-07 13:24:21] 2025-05-07 20:23:58,586 | INFO     | total size of present files: 0 B (workdir size: 4578910 B)
[2025-05-07 13:24:21] 2025-05-07 20:23:58,586 | INFO     | output file size check: skipping output file /home/boinc/slots/0/PanDA_Pilot-6636717221/HITS.44506063._037111.pool.root.1 since it does not exist
[2025-05-07 13:24:21] 2025-05-07 20:23:58,717 | INFO     | number of running child processes to parent process 4011582: 1
[2025-05-07 13:24:21] 2025-05-07 20:23:58,718 | INFO     | maximum number of monitored processes: 6
[2025-05-07 13:24:21] 2025-05-07 20:23:59,347 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-07 13:24:21] 2025-05-07 20:23:59,963 | INFO     | job 6636717221 has state=finished
[2025-05-07 13:24:21] 2025-05-07 20:23:59,963 | INFO     | preparing for final server update for job 6636717221 in state='finished'
[2025-05-07 13:24:21] 2025-05-07 20:24:00,244 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-07 13:24:21] 2025-05-07 20:24:00,244 | INFO     | this job has now completed (state=finished)
[2025-05-07 13:24:21] 2025-05-07 20:24:00,245 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-07 13:24:21] 2025-05-07 20:24:00,245 | INFO     | log transfer has been attempted: DONE
[2025-05-07 13:24:21] 2025-05-07 20:24:00,245 | INFO     | job 6636717221 has finished - writing final server update
[2025-05-07 13:24:21] 2025-05-07 20:24:00,245 | INFO     | total number of processed events: 400 (read)
[2025-05-07 13:24:21] 2025-05-07 20:24:00,247 | INFO     | executing command: lscpu
[2025-05-07 13:24:21] 2025-05-07 20:24:00,283 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-07 13:24:21] 2025-05-07 20:24:01,221 | INFO     | monitor loop #301: job 0:6636717221 is in state 'finished'
[2025-05-07 13:24:21] 2025-05-07 20:24:01,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-07 13:24:21] 2025-05-07 20:24:02,987 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-07 13:24:21] 2025-05-07 20:24:02,987 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6636717221/memory_monitor_summary.json (trf name=prmon)
[2025-05-07 13:24:21] 2025-05-07 20:24:02,988 | INFO     | extracted standard info from prmon json
[2025-05-07 13:24:21] 2025-05-07 20:24:02,988 | INFO     | extracted standard memory fields from prmon json
[2025-05-07 13:24:21] 2025-05-07 20:24:02,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-07 13:24:21] 2025-05-07 20:24:02,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-07 13:24:21] 2025-05-07 20:24:02,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-07 13:24:21] 2025-05-07 20:24:02,989 | INFO     | fitting pss+swap vs Time
[2025-05-07 13:24:21] 2025-05-07 20:24:02,989 | INFO     | sum of square deviations: 66962018.98333338
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | sum of deviations: 21056331828.316666
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | mean x: 1746647484.5166667
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | mean y: 2620424.183333333
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | -- intersect: -549233940531.8333
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | intersect: -549233940531.8333
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | chi2: 2.467088216457277
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | -- intersect: -549233940531.8333
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | current memory leak: 314.45 B/s (using 60 data points, chi2=2.47)
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | ..............................
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | . Timing measurements:
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | . get job = 0 s
[2025-05-07 13:24:21] 2025-05-07 20:24:02,990 | INFO     | . initial setup = 2 s
[2025-05-07 13:24:21] 2025-05-07 20:24:02,991 | INFO     | . payload setup = 3 s
[2025-05-07 13:24:21] 2025-05-07 20:24:02,991 | INFO     | . stage-in = 0 s
[2025-05-07 13:24:21] 2025-05-07 20:24:02,991 | INFO     | . payload execution = 4056 s
[2025-05-07 13:24:21] 2025-05-07 20:24:02,991 | INFO     | . stage-out = 0 s
[2025-05-07 13:24:21] 2025-05-07 20:24:02,991 | INFO     | . log creation = 0 s
[2025-05-07 13:24:21] 2025-05-07 20:24:02,991 | INFO     | ..............................
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | 
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | job summary report
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | --------------------------------------------------
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | PanDA job id: 6636717221
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | task id: 44506063
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | errors: (none)
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | pilot state: finished 
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | transexitcode: 0
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | exeerrorcode: 0
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | exeerrordiag: 
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | exitcode: 0
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | exitmsg: OK
[2025-05-07 13:24:21] 2025-05-07 20:24:03,047 | INFO     | cpuconsumptiontime: 27053 s
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | nevents: 400
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | neventsw: 0
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | pid: 4011582
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | pgrp: 4011582
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | corecount: 12
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | event service: False
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | sizes: {0: 2393735, 3: 2393941, 10: 2393969, 4064: 2419804, 4065: 2428739, 4067: 2428823, 4071: 2429121}
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | --------------------------------------------------
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | 
[2025-05-07 13:24:21] 2025-05-07 20:24:03,048 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-07 13:24:21] 2025-05-07 20:24:03,061 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-07 13:24:21] 2025-05-07 20:24:03,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-07 13:24:21] 2025-05-07 20:24:03,063 | INFO     | job 6636717221 has completed (purged errors)
[2025-05-07 13:24:21] 2025-05-07 20:24:03,063 | INFO     | overall cleanup function is called
[2025-05-07 13:24:21] 2025-05-07 20:24:03,368 | INFO     | PID=4005244 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-07 13:24:21] 2025-05-07 20:24:03,368 | INFO     | .. there are 14 such processes running
[2025-05-07 13:24:21] 2025-05-07 20:24:04,065 | INFO     | --- collectZombieJob: --- 10, [4011582]
[2025-05-07 13:24:21] 2025-05-07 20:24:04,066 | INFO     | zombie collector waiting for pid 4011582
[2025-05-07 13:24:21] 2025-05-07 20:24:04,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-07 13:24:21] 2025-05-07 20:24:04,066 | INFO     | collected zombie processes
[2025-05-07 13:24:21] 2025-05-07 20:24:04,066 | INFO     | will attempt to kill all subprocesses of pid=4011582
[2025-05-07 13:24:21] 2025-05-07 20:24:04,195 | INFO     | process IDs to be killed: [4011582] (in reverse order)
[2025-05-07 13:24:21] 2025-05-07 20:24:04,247 | WARNING  | found no corresponding commands to process id(s)
[2025-05-07 13:24:21] 2025-05-07 20:24:04,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-07 13:24:21] 2025-05-07 20:24:04,253 | INFO     | did not find any defunct processes belonging to 4011582
[2025-05-07 13:24:21] 2025-05-07 20:24:04,259 | INFO     | did not find any defunct processes belonging to 4011582
[2025-05-07 13:24:21] 2025-05-07 20:24:04,259 | INFO     | ready for new job
[2025-05-07 13:24:21] 2025-05-07 20:24:04,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-07 13:24:21] 2025-05-07 20:24:04,260 | INFO     | **************************************
[2025-05-07 13:24:21] 2025-05-07 20:24:04,260 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-07 13:24:21] 2025-05-07 20:24:04,260 | INFO     | **************************************
[2025-05-07 13:24:21] 2025-05-07 20:24:04,260 | INFO     | 
[2025-05-07 13:24:21] 2025-05-07 20:24:04,262 | INFO     | architecture information:
[2025-05-07 13:24:21] 2025-05-07 20:24:04,262 | INFO     | executing command: cat /etc/os-release
[2025-05-07 13:24:21] 2025-05-07 20:24:04,272 | INFO     | cat /etc/os-release:
[2025-05-07 13:24:21] NAME="CentOS Linux"
[2025-05-07 13:24:21] VERSION="7 (Core)"
[2025-05-07 13:24:21] ID="centos"
[2025-05-07 13:24:21] ID_LIKE="rhel fedora"
[2025-05-07 13:24:21] VERSION_ID="7"
[2025-05-07 13:24:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-07 13:24:21] ANSI_COLOR="0;31"
[2025-05-07 13:24:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-07 13:24:21] HOME_URL="https://www.centos.org/"
[2025-05-07 13:24:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-07 13:24:21] 
[2025-05-07 13:24:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-07 13:24:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-07 13:24:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-07 13:24:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-07 13:24:21] 
[2025-05-07 13:24:21] 2025-05-07 20:24:04,272 | INFO     | **************************************
[2025-05-07 13:24:21] 2025-05-07 20:24:04,775 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-07 13:24:21] 2025-05-07 20:24:04,786 | INFO     | sufficient remaining disk space (1951158763520 B)
[2025-05-07 13:24:21] 2025-05-07 20:24:04,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-07 13:24:21] 2025-05-07 20:24:04,787 | INFO     | current server update state: UPDATING_FINAL
[2025-05-07 13:24:21] 2025-05-07 20:24:04,787 | INFO     | update_server=False
[2025-05-07 13:24:21] 2025-05-07 20:24:04,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-07 13:24:21] 2025-05-07 20:24:04,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-07 13:24:21] 2025-05-07 20:24:04,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-07 13:24:21] 2025-05-07 20:24:04,787 | INFO     | aborting loop
[2025-05-07 13:24:21] 2025-05-07 20:24:05,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-07 13:24:21] 2025-05-07 20:24:05,375 | INFO     | found 0 job(s) in 20 queues
[2025-05-07 13:24:21] 2025-05-07 20:24:05,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-07 13:24:21] 2025-05-07 20:24:05,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-07 13:24:21] 2025-05-07 20:24:05,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-07 13:24:21] 2025-05-07 20:24:05,663 | INFO     | all job control threads have been joined
[2025-05-07 13:24:21] 2025-05-07 20:24:05,792 | INFO     | [job] retrieve thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:05,793 | INFO     | [job] job monitor thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:05,793 | INFO     | [job] queue monitor thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:05,825 | INFO     | all data control threads have been joined
[2025-05-07 13:24:21] 2025-05-07 20:24:05,989 | INFO     | [payload] execute_payloads thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:06,095 | INFO     | [job] validate thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:06,139 | INFO     | all payload control threads have been joined
[2025-05-07 13:24:21] 2025-05-07 20:24:06,324 | INFO     | [data] copytool_in thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:06,354 | INFO     | [payload] validate_pre thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:06,574 | INFO     | [job] create_data_payload thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:06,591 | INFO     | [payload] failed_post thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:06,669 | INFO     | [job] control thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:06,831 | INFO     | [data] control thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:07,132 | INFO     | [payload] validate_post thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:07,145 | INFO     | [payload] control thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:07,158 | INFO     | [data] copytool_out thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:09,412 | INFO     | [data] queue_monitor thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:14,877 | INFO     | job.realtimelogging is not enabled
[2025-05-07 13:24:21] 2025-05-07 20:24:15,879 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-07 13:24:21] 2025-05-07 20:24:16,621 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921185597248)>', '<ExcThread(monitor, started 139920354039552)>']
[2025-05-07 13:24:21] 2025-05-07 20:24:17,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-07 13:24:21] 2025-05-07 20:24:17,438 | INFO     | [monitor] control thread has ended
[2025-05-07 13:24:21] 2025-05-07 20:24:21,647 | INFO     | all workflow threads have been joined
[2025-05-07 13:24:21] 2025-05-07 20:24:21,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-07 13:24:21] 2025-05-07 20:24:21,647 | INFO     | traces error code: 0
[2025-05-07 13:24:21] 2025-05-07 20:24:21,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-07 13:24:21] 2025-05-07 20:24:21,764 [wrapper] ==== pilot stdout END ====
[2025-05-07 13:24:21] 2025-05-07 20:24:21,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-07 13:24:21] 2025-05-07 20:24:21,768 [wrapper] pilotpid: 4005244
[2025-05-07 13:24:21] 2025-05-07 20:24:21,769 [wrapper] Pilot exit status: 0
[2025-05-07 13:24:21] 2025-05-07 20:24:21,777 [wrapper] pandaids: 6636717221
[2025-05-07 13:24:21] 2025-05-07 20:24:21,811 [wrapper] cleanup supervisor_pilot   38983 4005245
[2025-05-07 13:24:21] 2025-05-07 20:24:21,814 [wrapper] Test setup, not cleaning
[2025-05-07 13:24:21] 2025-05-07 20:24:21,816 [wrapper] apfmon messages muted
[2025-05-07 13:24:21] 2025-05-07 20:24:21,818 [wrapper] ==== wrapper stdout END ====
[2025-05-07 13:24:21] 2025-05-07 20:24:21,820 [wrapper] ==== wrapper stderr END ====
[2025-05-07 13:24:21]  *** Error codes and diagnostics ***
[2025-05-07 13:24:21]     "exeErrorCode": 0,
[2025-05-07 13:24:21]     "exeErrorDiag": "",
[2025-05-07 13:24:21]     "pilotErrorCode": 0,
[2025-05-07 13:24:21]     "pilotErrorDiag": "",
[2025-05-07 13:24:21]  *** Listing of results directory ***
[2025-05-07 13:24:21] total 415904
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc    495897 May  7 01:55 pilot3.tar.gz
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc      5111 May  7 02:22 queuedata.json
[2025-05-07 13:24:21] -rwx------. 1 boinc boinc     37140 May  7 02:24 runpilot2-wrapper.sh
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc       100 May  7 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-07 13:24:21] -rwxr-xr-x. 1 boinc boinc      7986 May  7 12:15 run_atlas
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc       105 May  7 12:15 job.xml
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc      6601 May  7 12:15 init_data.xml
[2025-05-07 13:24:21] -rw-r--r--. 2 boinc boinc 223681570 May  7 12:15 EVNT.44506061._001456.pool.root.1
[2025-05-07 13:24:21] -rw-r--r--. 2 boinc boinc     17569 May  7 12:15 start_atlas.sh
[2025-05-07 13:24:21] drwxrwx--x. 2 boinc boinc      4096 May  7 12:15 shared
[2025-05-07 13:24:21] -rw-r--r--. 2 boinc boinc    508885 May  7 12:15 input.tar.gz
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc         0 May  7 12:15 boinc_lockfile
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc      2557 May  7 12:15 pandaJob.out
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc       424 May  7 12:15 setup.sh.local
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc    996852 May  7 12:15 agis_schedconf.cvmfs.json
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc   1596741 May  7 12:15 agis_ddmendpoints.agis.ALL.json
[2025-05-07 13:24:21] drwx------. 4 boinc boinc      4096 May  7 12:15 pilot3
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc        95 May  7 13:23 pilot_heartbeat.json
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc 196808783 May  7 13:23 HITS.44506063._037111.pool.root.1
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc       529 May  7 13:23 boinc_task_state.xml
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc      1055 May  7 13:23 memory_monitor_summary.json
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc    361702 May  7 13:23 log.44506063._037111.job.log.tgz.1
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc      7726 May  7 13:24 heartbeat.json
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc      8192 May  7 13:24 boinc_mmap_file
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc        27 May  7 13:24 wrapper_checkpoint.txt
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc      4424 May  7 13:24 pilotlog.txt
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc    409763 May  7 13:24 log.44506063._037111.job.log.1
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc       357 May  7 13:24 output.list
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc       620 May  7 13:24 runtime_log
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc    788480 May  7 13:24 result.tar.gz
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc     10979 May  7 13:24 runtime_log.err
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc       659 May  7 13:24 FkxNDmdBqW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmYCILDmen66ln.diag
[2025-05-07 13:24:21] -rw-r--r--. 1 boinc boinc     22519 May  7 13:24 stderr.txt
[2025-05-07 13:24:21] HITS file was successfully produced:
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc 196808783 May  7 13:23 shared/HITS.pool.root.1
[2025-05-07 13:24:21]  *** Contents of shared directory: ***
[2025-05-07 13:24:21] total 411940
[2025-05-07 13:24:21] -rw-r--r--. 2 boinc boinc 223681570 May  7 12:15 ATLAS.root_0
[2025-05-07 13:24:21] -rw-r--r--. 2 boinc boinc     17569 May  7 12:15 start_atlas.sh
[2025-05-07 13:24:21] -rw-r--r--. 2 boinc boinc    508885 May  7 12:15 input.tar.gz
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc 196808783 May  7 13:23 HITS.pool.root.1
[2025-05-07 13:24:21] -rw-------. 1 boinc boinc    788480 May  7 13:24 result.tar.gz
13:24:23 (4001664): run_atlas exited; CPU time 27076.167143
13:24:23 (4001664): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN