Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:08 (3508): wrapper (7.7.26015): starting
06:40:08 (3508): wrapper: running run_atlas (--nthreads 8)
[2025-05-08 06:40:08] Arguments: --nthreads 8
[2025-05-08 06:40:08] Threads: 8
[2025-05-08 06:40:08] Checking for CVMFS
[2025-05-08 06:40:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-08 06:40:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-08 06:40:09] Running cvmfs_config stat atlas.cern.ch
[2025-05-08 06:40:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-08 06:40:09] 2.11.2.0 19354 4167 81512 145737 3 58 17268579 25165825 912 130560 0 1893330 99.656 2299664 4467 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-08 06:40:09] CVMFS is ok
[2025-05-08 06:40:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-08 06:40:09] Checking for apptainer binary...
[2025-05-08 06:40:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-08 06:40:09] Running /usr/bin/apptainer --version
[2025-05-08 06:40:09] apptainer version 1.3.2-1.el7
[2025-05-08 06:40:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-08 06:40:10] cg-vwn484.simple-grid.lan
[2025-05-08 06:40:10] apptainer works
[2025-05-08 06:40:10] Set ATHENA_PROC_NUMBER=8
[2025-05-08 06:40:10] Set ATHENA_CORE_NUMBER=8
[2025-05-08 06:40:10] Starting ATLAS job with PandaID=6636710912
[2025-05-08 06:40:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 10:04:35]  *** The last 200 lines of the pilot log: ***
[2025-05-08 10:04:35] 2025-05-08 08:02:41,275 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6636710912/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,275 | INFO     | extracted standard info from prmon json
[2025-05-08 10:04:35] 2025-05-08 08:02:41,275 | INFO     | extracted standard memory fields from prmon json
[2025-05-08 10:04:35] 2025-05-08 08:02:41,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-08 10:04:35] 2025-05-08 08:02:41,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-08 10:04:35] 2025-05-08 08:02:41,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-08 10:04:35] 2025-05-08 08:02:41,286 | INFO     | fitting pss+swap vs Time
[2025-05-08 10:04:35] 2025-05-08 08:02:41,287 | INFO     | sum of square deviations: 2370641658.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,288 | INFO     | sum of deviations: 60434765216.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,289 | INFO     | mean x: 1746685244.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,289 | INFO     | mean y: 2432831.8172588833
[2025-05-08 10:04:35] 2025-05-08 08:02:41,289 | INFO     | -- intersect: -44525812198.875465
[2025-05-08 10:04:35] 2025-05-08 08:02:41,289 | INFO     | intersect: -44525812198.875465
[2025-05-08 10:04:35] 2025-05-08 08:02:41,289 | INFO     | chi2: 5.0779274562649634
[2025-05-08 10:04:35] 2025-05-08 08:02:41,290 | INFO     | sum of square deviations: 2194675568.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,291 | INFO     | sum of deviations: 71729654993.5
[2025-05-08 10:04:35] 2025-05-08 08:02:41,291 | INFO     | mean x: 1746685091.5
[2025-05-08 10:04:35] 2025-05-08 08:02:41,291 | INFO     | mean y: 2442388.3177083335
[2025-05-08 10:04:35] 2025-05-08 08:02:41,292 | INFO     | -- intersect: -57085320751.890076
[2025-05-08 10:04:35] 2025-05-08 08:02:41,292 | INFO     | intersect: -57085320751.890076
[2025-05-08 10:04:35] 2025-05-08 08:02:41,292 | INFO     | chi2: 4.339881896130387
[2025-05-08 10:04:35] 2025-05-08 08:02:41,292 | INFO     | current chi2=4.339881896130387 (change=14.534385662087445 %)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,292 | INFO     | right removable region: 191
[2025-05-08 10:04:35] 2025-05-08 08:02:41,293 | INFO     | sum of square deviations: 2194675568.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,294 | INFO     | sum of deviations: 11791429899.499975
[2025-05-08 10:04:35] 2025-05-08 08:02:41,294 | INFO     | mean x: 1746685396.5
[2025-05-08 10:04:35] 2025-05-08 08:02:41,294 | INFO     | mean y: 2474847.5052083335
[2025-05-08 10:04:35] 2025-05-08 08:02:41,294 | INFO     | -- intersect: -9382018564.465954
[2025-05-08 10:04:35] 2025-05-08 08:02:41,294 | INFO     | intersect: -9382018564.465954
[2025-05-08 10:04:35] 2025-05-08 08:02:41,295 | INFO     | chi2: 2.4722652486839505
[2025-05-08 10:04:35] 2025-05-08 08:02:41,295 | INFO     | current chi2=2.4722652486839505 (change=51.313498076193284 %)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,295 | INFO     | sum of square deviations: 2027639878.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,297 | INFO     | sum of deviations: -23476456035.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,297 | INFO     | mean x: 1746685549.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,297 | INFO     | mean y: 2507048.780748663
[2025-05-08 10:04:35] 2025-05-08 08:02:41,297 | INFO     | -- intersect: 20226012683.575893
[2025-05-08 10:04:35] 2025-05-08 08:02:41,297 | INFO     | intersect: 20226012683.575893
[2025-05-08 10:04:35] 2025-05-08 08:02:41,297 | INFO     | chi2: 1.1932571682149642
[2025-05-08 10:04:35] 2025-05-08 08:02:41,298 | INFO     | current chi2=1.1932571682149642 (change=51.734257930043505 %)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,298 | INFO     | sum of square deviations: 1869302025.5
[2025-05-08 10:04:35] 2025-05-08 08:02:41,299 | INFO     | sum of deviations: -34561704123.50002
[2025-05-08 10:04:35] 2025-05-08 08:02:41,299 | INFO     | mean x: 1746685701.5
[2025-05-08 10:04:35] 2025-05-08 08:02:41,300 | INFO     | mean y: 2517590.39010989
[2025-05-08 10:04:35] 2025-05-08 08:02:41,300 | INFO     | -- intersect: 32297156759.70453
[2025-05-08 10:04:35] 2025-05-08 08:02:41,300 | INFO     | intersect: 32297156759.70453
[2025-05-08 10:04:35] 2025-05-08 08:02:41,300 | INFO     | chi2: 0.9312647598153667
[2025-05-08 10:04:35] 2025-05-08 08:02:41,300 | INFO     | current chi2=0.9312647598153667 (change=21.956072452639965 %)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,300 | INFO     | left removable region: 30
[2025-05-08 10:04:35] 2025-05-08 08:02:41,301 | INFO     | sum of square deviations: 1294014960.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,302 | INFO     | sum of deviations: -3670023642.0000014
[2025-05-08 10:04:35] 2025-05-08 08:02:41,302 | INFO     | mean x: 1746685976.0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,302 | INFO     | mean y: 2509592.6770186336
[2025-05-08 10:04:35] 2025-05-08 08:02:41,302 | INFO     | -- intersect: 4956377225.760524
[2025-05-08 10:04:35] 2025-05-08 08:02:41,302 | INFO     | intersect: 4956377225.760524
[2025-05-08 10:04:35] 2025-05-08 08:02:41,302 | INFO     | chi2: 0.058191630008539545
[2025-05-08 10:04:35] 2025-05-08 08:02:41,303 | INFO     | -- intersect: 4956377225.760524
[2025-05-08 10:04:35] 2025-05-08 08:02:41,303 | INFO     | current memory leak: -2.84 B/s (using 161 data points, chi2=0.06)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,303 | INFO     | ..............................
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . Timing measurements:
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . get job = 0 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . initial setup = 1 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . payload setup = 9 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . stage-in = 0 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . payload execution = 11991 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . stage-out = 4 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | . log creation = 1 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,304 | INFO     | ..............................
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | 
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | job summary report
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | --------------------------------------------------
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | PanDA job id: 6636710912
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | task id: 44506063
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | errors: (none)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | pilot state: finished 
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | transexitcode: 0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,429 | INFO     | exeerrorcode: 0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | exeerrordiag: 
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | exitcode: 0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | exitmsg: OK
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | cpuconsumptiontime: 53587 s
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | nevents: 400
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | neventsw: 0
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | pid: 13889
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | pgrp: 13889
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | corecount: 8
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | event service: False
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | sizes: {0: 2393518, 1: 2393717, 8: 2393923, 11: 2393951, 12005: 2422826, 12010: 2431797, 12013: 2431981, 12118: 2432151}
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | --------------------------------------------------
[2025-05-08 10:04:35] 2025-05-08 08:02:41,430 | INFO     | 
[2025-05-08 10:04:35] 2025-05-08 08:02:41,431 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-05-08 10:04:35] 2025-05-08 08:02:41,963 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,963 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,964 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,965 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 10:04:35] 2025-05-08 08:02:41,966 | INFO     | job 6636710912 has completed (purged errors)
[2025-05-08 10:04:35] 2025-05-08 08:02:41,966 | INFO     | overall cleanup function is called
[2025-05-08 10:04:35] 2025-05-08 08:02:42,979 | INFO     | --- collectZombieJob: --- 10, [13889]
[2025-05-08 10:04:35] 2025-05-08 08:02:42,980 | INFO     | zombie collector waiting for pid 13889
[2025-05-08 10:04:35] 2025-05-08 08:02:42,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 10:04:35] 2025-05-08 08:02:42,980 | INFO     | collected zombie processes
[2025-05-08 10:04:35] 2025-05-08 08:02:42,980 | INFO     | will attempt to kill all subprocesses of pid=13889
[2025-05-08 10:04:35] 2025-05-08 08:02:43,059 | INFO     | process IDs to be killed: [13889] (in reverse order)
[2025-05-08 10:04:35] 2025-05-08 08:02:43,880 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 10:04:35] 2025-05-08 08:02:43,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 10:04:35] 2025-05-08 08:02:43,882 | INFO     | did not find any defunct processes belonging to 13889
[2025-05-08 10:04:35] 2025-05-08 08:02:43,884 | INFO     | did not find any defunct processes belonging to 13889
[2025-05-08 10:04:35] 2025-05-08 08:02:43,885 | INFO     | ready for new job
[2025-05-08 10:04:35] 2025-05-08 08:02:43,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 10:04:35] 2025-05-08 08:02:43,886 | INFO     | **************************************
[2025-05-08 10:04:35] 2025-05-08 08:02:43,887 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 10:04:35] 2025-05-08 08:02:43,887 | INFO     | **************************************
[2025-05-08 10:04:35] 2025-05-08 08:02:43,887 | INFO     | 
[2025-05-08 10:04:35] 2025-05-08 08:02:43,888 | INFO     | pilot is running in a VM
[2025-05-08 10:04:35] 2025-05-08 08:02:43,888 | INFO     | architecture information:
[2025-05-08 10:04:35] 2025-05-08 08:02:43,888 | INFO     | executing command: cat /etc/os-release
[2025-05-08 10:04:35] 2025-05-08 08:02:44,168 | INFO     | cat /etc/os-release:
[2025-05-08 10:04:35] NAME="CentOS Linux"
[2025-05-08 10:04:35] VERSION="7 (Core)"
[2025-05-08 10:04:35] ID="centos"
[2025-05-08 10:04:35] ID_LIKE="rhel fedora"
[2025-05-08 10:04:35] VERSION_ID="7"
[2025-05-08 10:04:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 10:04:35] ANSI_COLOR="0;31"
[2025-05-08 10:04:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 10:04:35] HOME_URL="https://www.centos.org/"
[2025-05-08 10:04:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 10:04:35] 
[2025-05-08 10:04:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 10:04:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 10:04:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 10:04:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 10:04:35] 
[2025-05-08 10:04:35] 2025-05-08 08:02:44,168 | INFO     | **************************************
[2025-05-08 10:04:35] 2025-05-08 08:02:44,672 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-05-08 10:04:35] 2025-05-08 08:02:44,890 | INFO     | sufficient remaining disk space (496008953856 B)
[2025-05-08 10:04:35] 2025-05-08 08:02:44,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 10:04:35] 2025-05-08 08:02:44,890 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 10:04:35] 2025-05-08 08:02:44,891 | INFO     | update_server=False
[2025-05-08 10:04:35] 2025-05-08 08:02:44,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 10:04:35] 2025-05-08 08:02:44,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 10:04:35] 2025-05-08 08:02:45,116 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 10:04:35] 2025-05-08 08:02:45,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 10:04:35] 2025-05-08 08:02:45,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 10:04:35] 2025-05-08 08:02:45,272 | INFO     | all payload control threads have been joined
[2025-05-08 10:04:35] 2025-05-08 08:02:45,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 10:04:35] 2025-05-08 08:02:45,891 | INFO     | aborting loop
[2025-05-08 10:04:35] 2025-05-08 08:02:45,897 | INFO     | [job] retrieve thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:45,938 | INFO     | all data control threads have been joined
[2025-05-08 10:04:35] 2025-05-08 08:02:46,004 | INFO     | [payload] validate_post thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,086 | INFO     | all job control threads have been joined
[2025-05-08 10:04:35] 2025-05-08 08:02:46,279 | INFO     | [payload] control thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 10:04:35] 2025-05-08 08:02:46,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 10:04:35] 2025-05-08 08:02:46,604 | INFO     | [data] copytool_in thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,720 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,896 | INFO     | [job] job monitor thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,898 | INFO     | [data] copytool_out thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,944 | INFO     | [data] control thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:46,984 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:47,092 | INFO     | [job] control thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:47,129 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:47,144 | INFO     | [job] validate thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:47,287 | INFO     | [payload] failed_post thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:47,450 | INFO     | [job] queue monitor thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:50,375 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 10:04:35] 2025-05-08 08:02:52,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676617033536)>', '<ExcThread(monitor, started 140676192782080)>']
[2025-05-08 10:04:35] 2025-05-08 08:02:53,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 10:04:35] 2025-05-08 08:02:53,167 | INFO     | [monitor] control thread has ended
[2025-05-08 10:04:35] 2025-05-08 08:02:57,384 | INFO     | all workflow threads have been joined
[2025-05-08 10:04:35] 2025-05-08 08:02:57,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 10:04:35] 2025-05-08 08:02:57,385 | INFO     | traces error code: 0
[2025-05-08 10:04:35] 2025-05-08 08:02:57,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 10:04:35] 2025-05-08 08:02:57,663 [wrapper] ==== pilot stdout END ====
[2025-05-08 10:04:35] 2025-05-08 08:02:57,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 10:04:35] 2025-05-08 08:02:57,866 [wrapper] pilotpid: 7453
[2025-05-08 10:04:35] 2025-05-08 08:02:57,936 [wrapper] Pilot exit status: 0
[2025-05-08 10:04:35] 2025-05-08 08:02:58,376 [wrapper] pandaids: 6636710912
[2025-05-08 10:04:35] 2025-05-08 08:02:59,216 [wrapper] cleanup supervisor_pilot  1784 7454
[2025-05-08 10:04:35] 2025-05-08 08:02:59,307 [wrapper] Test setup, not cleaning
[2025-05-08 10:04:35] 2025-05-08 08:02:59,413 [wrapper] apfmon messages muted
[2025-05-08 10:04:35] 2025-05-08 08:02:59,496 [wrapper] ==== wrapper stdout END ====
[2025-05-08 10:04:35] 2025-05-08 08:02:59,593 [wrapper] ==== wrapper stderr END ====
[2025-05-08 10:04:35]  *** Error codes and diagnostics ***
[2025-05-08 10:04:35]     "exeErrorCode": 0,
[2025-05-08 10:04:35]     "exeErrorDiag": "",
[2025-05-08 10:04:35]     "pilotErrorCode": 0,
[2025-05-08 10:04:35]     "pilotErrorDiag": "",
[2025-05-08 10:04:35]  *** Listing of results directory ***
[2025-05-08 10:04:35] total 407880
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc    495897 May  7 10:09 pilot3.tar.gz
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc      5111 May  7 10:34 queuedata.json
[2025-05-08 10:04:35] -rwx------. 1 boinc boinc     37140 May  7 10:35 runpilot2-wrapper.sh
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc       100 May  8 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 10:04:35] -rwxr-xr-x. 1 boinc boinc      7986 May  8 06:40 run_atlas
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc       105 May  8 06:40 job.xml
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc      6371 May  8 06:40 init_data.xml
[2025-05-08 10:04:35] -rw-r--r--. 2 boinc boinc 223243539 May  8 06:40 EVNT.44506061._001440.pool.root.1
[2025-05-08 10:04:35] -rw-r--r--. 2 boinc boinc     17569 May  8 06:40 start_atlas.sh
[2025-05-08 10:04:35] drwxrwx--x. 2 boinc boinc        68 May  8 06:40 shared
[2025-05-08 10:04:35] -rw-r--r--. 2 boinc boinc    508884 May  8 06:40 input.tar.gz
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc         0 May  8 06:40 boinc_lockfile
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc      2557 May  8 06:40 pandaJob.out
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc       424 May  8 06:40 setup.sh.local
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc    996836 May  8 06:40 agis_schedconf.cvmfs.json
[2025-05-08 10:04:35] drwx------. 4 boinc boinc      4096 May  8 06:40 pilot3
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc 187730463 May  8 09:59 HITS.44506063._036708.pool.root.1
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc       530 May  8 09:59 boinc_task_state.xml
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc      1020 May  8 10:00 memory_monitor_summary.json
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc   1596741 May  8 10:00 agis_ddmendpoints.agis.ALL.json
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc    367109 May  8 10:00 log.44506063._036708.job.log.tgz.1
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc        95 May  8 10:01 pilot_heartbeat.json
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc      7690 May  8 10:02 heartbeat.json
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc      4417 May  8 10:02 pilotlog.txt
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc   1064651 May  8 10:02 log.44506063._036708.job.log.1
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc       357 May  8 10:03 output.list
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc       620 May  8 10:03 runtime_log
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc   1454080 May  8 10:03 result.tar.gz
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc     11031 May  8 10:03 runtime_log.err
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc       657 May  8 10:03 LKxMDmfQpW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmbAILDm5v1KCo.diag
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc      8192 May  8 10:04 boinc_mmap_file
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc        28 May  8 10:04 wrapper_checkpoint.txt
[2025-05-08 10:04:35] -rw-r--r--. 1 boinc boinc     20483 May  8 10:04 stderr.txt
[2025-05-08 10:04:35] HITS file was successfully produced:
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc 187730463 May  8 09:59 shared/HITS.pool.root.1
[2025-05-08 10:04:35]  *** Contents of shared directory: ***
[2025-05-08 10:04:35] total 403284
[2025-05-08 10:04:35] -rw-r--r--. 2 boinc boinc 223243539 May  8 06:40 ATLAS.root_0
[2025-05-08 10:04:35] -rw-r--r--. 2 boinc boinc     17569 May  8 06:40 start_atlas.sh
[2025-05-08 10:04:35] -rw-r--r--. 2 boinc boinc    508884 May  8 06:40 input.tar.gz
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc 187730463 May  8 09:59 HITS.pool.root.1
[2025-05-08 10:04:35] -rw-------. 1 boinc boinc   1454080 May  8 10:03 result.tar.gz
10:04:37 (3508): run_atlas exited; CPU time 53676.960013
10:04:37 (3508): called boinc_finish(0)

</stderr_txt>
]]>

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