Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:27:50 (1835454): wrapper (7.7.26015): starting
22:27:50 (1835454): wrapper: running run_atlas (--nthreads 2)
[2025-05-07 22:27:50] Arguments: --nthreads 2
[2025-05-07 22:27:50] Threads: 2
[2025-05-07 22:27:50] Checking for CVMFS
[2025-05-07 22:27:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 22:27:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 22:27:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 22:27:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 22:27:50] 2.9.2.0 1045126 3784 71480 145724 3 55 36017454 36864000 0 130560 0 1870905 99.986 943402 16867 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-07 22:27:50] CVMFS is ok
[2025-05-07 22:27:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-07 22:27:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-07 22:27:50] Further information can be found at the LHC@home message board.
[2025-05-07 22:27:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 22:27:50] Checking for apptainer binary...
[2025-05-07 22:27:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 22:27:50] Running /usr/bin/apptainer --version
[2025-05-07 22:27:50] apptainer version 1.3.6-6.1
[2025-05-07 22:27:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 22:27:50] atlasA217
[2025-05-07 22:27:50] apptainer works
[2025-05-07 22:27:50] Set ATHENA_PROC_NUMBER=2
[2025-05-07 22:27:50] Set ATHENA_CORE_NUMBER=2
[2025-05-07 22:27:50] Starting ATLAS job with PandaID=6636702025
[2025-05-07 22:27:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-08 01:08:52]  *** The last 200 lines of the pilot log: ***
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | -- intersect: -1519938855.8543272
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | intersect: -1519938855.8543272
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | chi2: 4.005288500914498
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | sum of square deviations: 1110539892.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | sum of deviations: 10024820093.000021
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | mean x: 1746654333.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | mean y: 2311055.7189542484
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | -- intersect: -15764700628.525839
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | intersect: -15764700628.525839
[2025-05-08 01:08:52] 2025-05-07 23:08:11,184 | INFO     | chi2: 3.4000737555336094
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | current chi2=3.4000737555336094 (change=15.110390805623716 %)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | right removable region: 152
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | sum of square deviations: 1110539892.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | sum of deviations: -29091269110.999992
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | mean x: 1746654638.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | mean y: 2339861.359477124
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | -- intersect: 45757022321.73008
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | intersect: 45757022321.73008
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | chi2: 1.9495524804311377
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | current chi2=1.9495524804311377 (change=51.32554171850515 %)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,185 | INFO     | sum of square deviations: 1005179777.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | sum of deviations: -49959822066.49997
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | mean x: 1746654790.5
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | mean y: 2370070.831081081
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | -- intersect: 86815261199.04146
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | intersect: 86815261199.04146
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | chi2: 1.0053171451785594
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | current chi2=1.0053171451785594 (change=48.43344022438234 %)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | sum of square deviations: 906703512.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | sum of deviations: -44863100687.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | mean x: 1746654943.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | mean y: 2362118.951048951
[2025-05-08 01:08:52] 2025-05-07 23:08:11,186 | INFO     | -- intersect: 86425713894.00764
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | intersect: 86425713894.00764
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | chi2: 0.9964596834855978
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | current chi2=0.9964596834855978 (change=0.8810614377205739 %)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | left removable region: 30
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | sum of square deviations: 563026370.5
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | sum of deviations: -15347376191.0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | mean x: 1746655217.5
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | mean y: 2339282.4918032787
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | -- intersect: 47613918603.61603
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | intersect: 47613918603.61603
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | chi2: 0.2519784597284491
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | -- intersect: 47613918603.61603
[2025-05-08 01:08:52] 2025-05-07 23:08:11,187 | INFO     | current memory leak: -27.26 B/s (using 122 data points, chi2=0.25)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | ..............................
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . Timing measurements:
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . get job = 0 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . initial setup = 1 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . payload setup = 3 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . stage-in = 0 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . payload execution = 9590 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . stage-out = 0 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | . log creation = 0 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,188 | INFO     | ..............................
[2025-05-08 01:08:52] 2025-05-07 23:08:11,635 | INFO     | 
[2025-05-08 01:08:52] 2025-05-07 23:08:11,636 | INFO     | job summary report
[2025-05-08 01:08:52] 2025-05-07 23:08:11,636 | INFO     | --------------------------------------------------
[2025-05-08 01:08:52] 2025-05-07 23:08:11,636 | INFO     | PanDA job id: 6636702025
[2025-05-08 01:08:52] 2025-05-07 23:08:11,636 | INFO     | task id: 44506063
[2025-05-08 01:08:52] 2025-05-07 23:08:11,636 | INFO     | errors: (none)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-08 01:08:52] 2025-05-07 23:08:11,637 | INFO     | pilot state: finished 
[2025-05-08 01:08:52] 2025-05-07 23:08:11,637 | INFO     | transexitcode: 0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,637 | INFO     | exeerrorcode: 0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,637 | INFO     | exeerrordiag: 
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | exitcode: 0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | exitmsg: OK
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | cpuconsumptiontime: 17953 s
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | nevents: 400
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | neventsw: 0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | pid: 1845497
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | pgrp: 1845497
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | corecount: 2
[2025-05-08 01:08:52] 2025-05-07 23:08:11,638 | INFO     | event service: False
[2025-05-08 01:08:52] 2025-05-07 23:08:11,639 | INFO     | sizes: {0: 2393570, 1: 2393769, 3: 2393975, 11: 2394003, 9597: 2422404, 9598: 2431535, 9601: 2431649}
[2025-05-08 01:08:52] 2025-05-07 23:08:11,639 | INFO     | --------------------------------------------------
[2025-05-08 01:08:52] 2025-05-07 23:08:11,639 | INFO     | 
[2025-05-08 01:08:52] 2025-05-07 23:08:11,639 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | job 6636702025 has completed (purged errors)
[2025-05-08 01:08:52] 2025-05-07 23:08:11,653 | INFO     | overall cleanup function is called
[2025-05-08 01:08:52] 2025-05-07 23:08:12,659 | INFO     | --- collectZombieJob: --- 10, [1845497]
[2025-05-08 01:08:52] 2025-05-07 23:08:12,659 | INFO     | zombie collector waiting for pid 1845497
[2025-05-08 01:08:52] 2025-05-07 23:08:12,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-08 01:08:52] 2025-05-07 23:08:12,660 | INFO     | collected zombie processes
[2025-05-08 01:08:52] 2025-05-07 23:08:12,660 | INFO     | will attempt to kill all subprocesses of pid=1845497
[2025-05-08 01:08:52] 2025-05-07 23:08:12,715 | INFO     | process IDs to be killed: [1845497] (in reverse order)
[2025-05-08 01:08:52] 2025-05-07 23:08:12,743 | WARNING  | found no corresponding commands to process id(s)
[2025-05-08 01:08:52] 2025-05-07 23:08:12,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-08 01:08:52] 2025-05-07 23:08:12,745 | INFO     | did not find any defunct processes belonging to 1845497
[2025-05-08 01:08:52] 2025-05-07 23:08:12,746 | INFO     | did not find any defunct processes belonging to 1845497
[2025-05-08 01:08:52] 2025-05-07 23:08:12,746 | INFO     | ready for new job
[2025-05-08 01:08:52] 2025-05-07 23:08:12,746 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-08 01:08:52] 2025-05-07 23:08:12,747 | INFO     | **************************************
[2025-05-08 01:08:52] 2025-05-07 23:08:12,747 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-08 01:08:52] 2025-05-07 23:08:12,747 | INFO     | **************************************
[2025-05-08 01:08:52] 2025-05-07 23:08:12,747 | INFO     | 
[2025-05-08 01:08:52] 2025-05-07 23:08:12,747 | INFO     | architecture information:
[2025-05-08 01:08:52] 2025-05-07 23:08:12,747 | INFO     | executing command: cat /etc/os-release
[2025-05-08 01:08:52] 2025-05-07 23:08:12,757 | INFO     | cat /etc/os-release:
[2025-05-08 01:08:52] NAME="CentOS Linux"
[2025-05-08 01:08:52] VERSION="7 (Core)"
[2025-05-08 01:08:52] ID="centos"
[2025-05-08 01:08:52] ID_LIKE="rhel fedora"
[2025-05-08 01:08:52] VERSION_ID="7"
[2025-05-08 01:08:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-08 01:08:52] ANSI_COLOR="0;31"
[2025-05-08 01:08:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-08 01:08:52] HOME_URL="https://www.centos.org/"
[2025-05-08 01:08:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-08 01:08:52] 
[2025-05-08 01:08:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-08 01:08:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-08 01:08:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-08 01:08:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-08 01:08:52] 
[2025-05-08 01:08:52] 2025-05-07 23:08:12,757 | INFO     | **************************************
[2025-05-08 01:08:52] 2025-05-07 23:08:12,922 | WARNING  | process 1845497 can no longer be monitored (due to stat problems) - aborting
[2025-05-08 01:08:52] 2025-05-07 23:08:12,964 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 01:08:52] 2025-05-07 23:08:12,964 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-05-08 01:08:52] 2025-05-07 23:08:12,964 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6636702025/payload.stdout) since it has not been created yet
[2025-05-08 01:08:52] 2025-05-07 23:08:12,965 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 01:08:52] 2025-05-07 23:08:12,975 | INFO     | sufficient remaining disk space (319951994880 B)
[2025-05-08 01:08:52] 2025-05-07 23:08:12,976 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-05-08 01:08:52] 2025-05-07 23:08:12,976 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6636702025/HITS.44506063._036098.pool.root.1 since it does not exist
[2025-05-08 01:08:52] 2025-05-07 23:08:13,028 | INFO     | number of running child processes to parent process 1845497: 1
[2025-05-08 01:08:52] 2025-05-07 23:08:13,028 | INFO     | maximum number of monitored processes: 6
[2025-05-08 01:08:52] 2025-05-07 23:08:13,028 | INFO     | aborting job monitoring since job object (job id=6636702025) has expired
[2025-05-08 01:08:52] 2025-05-07 23:08:13,261 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-08 01:08:52] 2025-05-07 23:08:13,292 | INFO     | sufficient remaining disk space (319951994880 B)
[2025-05-08 01:08:52] 2025-05-07 23:08:13,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-08 01:08:52] 2025-05-07 23:08:13,293 | INFO     | current server update state: UPDATING_FINAL
[2025-05-08 01:08:52] 2025-05-07 23:08:13,293 | INFO     | update_server=False
[2025-05-08 01:08:52] 2025-05-07 23:08:13,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-08 01:08:52] 2025-05-07 23:08:13,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-08 01:08:52] 2025-05-07 23:08:13,294 | INFO     | will abort loop
[2025-05-08 01:08:52] 2025-05-07 23:08:13,486 | INFO     | found 0 job(s) in 20 queues
[2025-05-08 01:08:52] 2025-05-07 23:08:13,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-08 01:08:52] 2025-05-07 23:08:13,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-08 01:08:52] 2025-05-07 23:08:13,598 | INFO     | all payload control threads have been joined
[2025-05-08 01:08:52] 2025-05-07 23:08:13,848 | INFO     | all data control threads have been joined
[2025-05-08 01:08:52] 2025-05-07 23:08:13,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-08 01:08:52] 2025-05-07 23:08:14,294 | INFO     | job.realtimelogging is not enabled
[2025-05-08 01:08:52] 2025-05-07 23:08:14,299 | INFO     | [job] retrieve thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,300 | INFO     | [job] job monitor thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,304 | INFO     | [job] validate thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,305 | INFO     | [job] create_data_payload thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,328 | INFO     | [payload] validate_pre thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,333 | INFO     | all job control threads have been joined
[2025-05-08 01:08:52] 2025-05-07 23:08:14,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-08 01:08:52] 2025-05-07 23:08:14,451 | INFO     | [payload] failed_post thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,494 | INFO     | [payload] execute_payloads thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,603 | INFO     | [payload] control thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,853 | INFO     | [data] control thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:14,986 | INFO     | [payload] validate_post thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:15,299 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:15,339 | INFO     | [job] control thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:15,565 | INFO     | [data] copytool_in thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:15,893 | INFO     | [data] copytool_out thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:16,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-08 01:08:52] 2025-05-07 23:08:17,239 | INFO     | [job] queue monitor thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:18,423 | INFO     | [data] queue_monitor thread has finished
[2025-05-08 01:08:52] 2025-05-07 23:08:18,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527283717952)>', '<ExcThread(monitor, started 140526925883136)>']
[2025-05-08 01:08:52] 2025-05-07 23:08:19,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-08 01:08:52] 2025-05-07 23:08:19,515 | INFO     | [monitor] control thread has ended
[2025-05-08 01:08:52] 2025-05-07 23:08:23,785 | INFO     | all workflow threads have been joined
[2025-05-08 01:08:52] 2025-05-07 23:08:23,785 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-08 01:08:52] 2025-05-07 23:08:23,786 | INFO     | traces error code: 0
[2025-05-08 01:08:52] 2025-05-07 23:08:23,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-08 01:08:52] 2025-05-07 23:08:23,842 [wrapper] ==== pilot stdout END ====
[2025-05-08 01:08:52] 2025-05-07 23:08:23,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-08 01:08:52] 2025-05-07 23:08:23,847 [wrapper] pilotpid: 1839086
[2025-05-08 01:08:52] 2025-05-07 23:08:23,850 [wrapper] Pilot exit status: 0
[2025-05-08 01:08:52] 2025-05-07 23:08:23,858 [wrapper] pandaids: 6636702025
[2025-05-08 01:08:52] 2025-05-07 23:08:23,877 [wrapper] cleanup supervisor_pilot 1864659 1839087
[2025-05-08 01:08:52] 2025-05-07 23:08:23,880 [wrapper] Test setup, not cleaning
[2025-05-08 01:08:52] 2025-05-07 23:08:23,882 [wrapper] apfmon messages muted
[2025-05-08 01:08:52] 2025-05-07 23:08:23,885 [wrapper] ==== wrapper stdout END ====
[2025-05-08 01:08:52] 2025-05-07 23:08:23,887 [wrapper] ==== wrapper stderr END ====
[2025-05-08 01:08:52]  *** Error codes and diagnostics ***
[2025-05-08 01:08:52]     "exeErrorCode": 0,
[2025-05-08 01:08:52]     "exeErrorDiag": "",
[2025-05-08 01:08:52]     "pilotErrorCode": 0,
[2025-05-08 01:08:52]     "pilotErrorDiag": "",
[2025-05-08 01:08:52]  *** Listing of results directory ***
[2025-05-08 01:08:52] total 418548
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc    495897 May  7 09:53 pilot3.tar.gz
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc      5111 May  7 09:54 queuedata.json
[2025-05-08 01:08:52] -rwx------ 1 boinc boinc     37140 May  7 09:55 runpilot2-wrapper.sh
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc       100 May  7 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-08 01:08:52] -rwxr-xr-x 1 boinc boinc      7986 May  7 22:27 run_atlas
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc       105 May  7 22:27 job.xml
[2025-05-08 01:08:52] -rw-r--r-- 2 boinc boinc 225253502 May  7 22:27 EVNT.44506061._001416.pool.root.1
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc      6678 May  7 22:27 init_data.xml
[2025-05-08 01:08:52] drwxrwx--x 2 boinc boinc      4096 May  7 22:27 shared
[2025-05-08 01:08:52] -rw-r--r-- 2 boinc boinc    508881 May  7 22:27 input.tar.gz
[2025-05-08 01:08:52] -rw-r--r-- 2 boinc boinc     17569 May  7 22:27 start_atlas.sh
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc         0 May  7 22:27 boinc_lockfile
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc      2557 May  7 22:27 pandaJob.out
[2025-05-08 01:08:52] -rw------- 1 boinc boinc       424 May  7 22:27 setup.sh.local
[2025-05-08 01:08:52] -rw------- 1 boinc boinc    996828 May  7 22:27 agis_schedconf.cvmfs.json
[2025-05-08 01:08:52] -rw------- 1 boinc boinc   1596741 May  7 22:27 agis_ddmendpoints.agis.ALL.json
[2025-05-08 01:08:52] drwx------ 4 boinc boinc      4096 May  7 22:27 pilot3
[2025-05-08 01:08:52] -rw------- 1 boinc boinc 197193169 May  8 01:07 HITS.44506063._036098.pool.root.1
[2025-05-08 01:08:52] -rw------- 1 boinc boinc        95 May  8 01:07 pilot_heartbeat.json
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc       529 May  8 01:07 boinc_task_state.xml
[2025-05-08 01:08:52] -rw------- 1 boinc boinc      1021 May  8 01:08 memory_monitor_summary.json
[2025-05-08 01:08:52] -rw------- 1 boinc boinc    254153 May  8 01:08 log.44506063._036098.job.log.tgz.1
[2025-05-08 01:08:52] -rw------- 1 boinc boinc      7663 May  8 01:08 heartbeat.json
[2025-05-08 01:08:52] -rw------- 1 boinc boinc      5724 May  8 01:08 pilotlog.txt
[2025-05-08 01:08:52] -rw------- 1 boinc boinc    893893 May  8 01:08 log.44506063._036098.job.log.1
[2025-05-08 01:08:52] -rw------- 1 boinc boinc       357 May  8 01:08 output.list
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc       620 May  8 01:08 runtime_log
[2025-05-08 01:08:52] -rw------- 1 boinc boinc   1167360 May  8 01:08 result.tar.gz
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc     11114 May  8 01:08 runtime_log.err
[2025-05-08 01:08:52] -rw------- 1 boinc boinc       662 May  8 01:08 hoWNDmfnoW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5J6LDm7LrVxm.diag
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc      8192 May  8 01:08 boinc_mmap_file
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc        27 May  8 01:08 wrapper_checkpoint.txt
[2025-05-08 01:08:52] -rw-r--r-- 1 boinc boinc     21203 May  8 01:08 stderr.txt
[2025-05-08 01:08:52] HITS file was successfully produced:
[2025-05-08 01:08:52] -rw------- 1 boinc boinc 197193169 May  8 01:07 shared/HITS.pool.root.1
[2025-05-08 01:08:52]  *** Contents of shared directory: ***
[2025-05-08 01:08:52] total 414216
[2025-05-08 01:08:52] -rw-r--r-- 2 boinc boinc 225253502 May  7 22:27 ATLAS.root_0
[2025-05-08 01:08:52] -rw-r--r-- 2 boinc boinc    508881 May  7 22:27 input.tar.gz
[2025-05-08 01:08:52] -rw-r--r-- 2 boinc boinc     17569 May  7 22:27 start_atlas.sh
[2025-05-08 01:08:52] -rw------- 1 boinc boinc 197193169 May  8 01:07 HITS.pool.root.1
[2025-05-08 01:08:52] -rw------- 1 boinc boinc   1167360 May  8 01:08 result.tar.gz
01:08:54 (1835454): run_atlas exited; CPU time 18018.788602
01:08:54 (1835454): called boinc_finish(0)

</stderr_txt>
]]>

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