Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-07 11:02:50 (6904): Detected: vboxwrapper 26206
2025-05-07 11:02:50 (6904): Detected: BOINC client v8.0.2
2025-05-07 11:02:52 (6904): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-05-07 11:02:52 (6904): Successfully copied 'init_data.xml' to the shared directory.
2025-05-07 11:02:52 (6904): Create VM. (boinc_9a22d775f8af3cd8, slot#0)
2025-05-07 11:02:53 (6904): Setting Memory Size for VM. (4400MB)
2025-05-07 11:02:53 (6904): Setting CPU Count for VM. (4)
2025-05-07 11:02:54 (6904): Setting Chipset Options for VM.
2025-05-07 11:02:54 (6904): Setting Graphics Controller Options for VM.
2025-05-07 11:02:54 (6904): Setting Boot Options for VM.
2025-05-07 11:02:54 (6904): Setting Network Configuration for NAT.
2025-05-07 11:02:55 (6904): Enabling VM Network Access.
2025-05-07 11:02:55 (6904): Disabling USB Support for VM.
2025-05-07 11:02:55 (6904): Disabling COM Port Support for VM.
2025-05-07 11:02:56 (6904): Disabling LPT Port Support for VM.
2025-05-07 11:02:56 (6904): Disabling Audio Support for VM.
2025-05-07 11:02:56 (6904): Disabling Clipboard Support for VM.
2025-05-07 11:02:56 (6904): Disabling Drag and Drop Support for VM.
2025-05-07 11:02:57 (6904): Adding storage controller(s) to VM.
2025-05-07 11:02:57 (6904): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-07 11:03:00 (6904): Adding VirtualBox Guest Additions to VM.
2025-05-07 11:03:00 (6904): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-07 11:03:01 (6904): forwarding host port 62442 to guest port 80
2025-05-07 11:03:01 (6904): Enabling remote desktop for VM.
2025-05-07 11:03:01 (6904): Enabling shared directory for VM.
2025-05-07 11:03:02 (6904): Starting VM using VBoxManage interface. (boinc_9a22d775f8af3cd8, slot#0)
2025-05-07 11:03:09 (6904): Successfully started VM. (PID = '13872')
2025-05-07 11:03:09 (6904): Reporting VM Process ID to BOINC.
2025-05-07 11:03:09 (6904): Guest Log: BIOS: VirtualBox 7.0.12
2025-05-07 11:03:09 (6904): Guest Log: CPUID EDX: 0x178bfbff
2025-05-07 11:03:09 (6904): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-07 11:03:09 (6904): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-07 11:03:09 (6904): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-07 11:03:09 (6904): Detected: Web Application Enabled (http://localhost:62442)
2025-05-07 11:03:09 (6904): Detected: Remote Desktop Enabled (localhost:62443)
2025-05-07 11:03:09 (6904): Preference change detected
2025-05-07 11:03:09 (6904): Setting CPU throttle for VM. (100%)
2025-05-07 11:03:09 (6904): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-07 11:03:11 (6904): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-07 11:03:11 (6904): Guest Log: BIOS: Booting from Hard Disk...
2025-05-07 11:03:14 (6904): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-07 11:03:14 (6904): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-07 11:03:14 (6904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-07 11:03:22 (6904): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-07 11:03:22 (6904): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-07 11:03:32 (6904): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.000164 main     Log opened 2025-05-07T11:03:30.623974000Z
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.000382 main     OS Product: Linux
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.000429 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.000468 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.000507 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.000508 main     Process ID: 1305
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.000509 main     Package type: LINUX_64BITS_GENERIC
2025-05-07 11:03:32 (6904): Guest Log: 00:00:00.001651 main     5.2.32 r132073 started. Verbose level = 0
2025-05-07 11:03:33 (6904): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-07 11:03:33 (6904): Guest Log: [INFO] Mounting shared directory
2025-05-07 11:03:33 (6904): Guest Log: [INFO] Checking for init_data.xml
2025-05-07 11:03:42 (6904): Guest Log: 00:00:10.008875 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 022 387 000ns (GuestNow=1 746 608 622 605 519 000 ns GuestLast=1 746 615 810 627 906 000 ns fSetTimeLastLoop=true )
2025-05-07 11:05:58 (6904): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-07 11:05:58 (6904): Guest Log: [INFO] Detected branch: prod
2025-05-07 11:05:58 (6904): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-07 11:05:58 (6904): Guest Log: Copying input files
2025-05-07 11:06:00 (6904): Guest Log: Copied input files into RunAtlas.
2025-05-07 11:06:00 (6904): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-07 11:06:00 (6904): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-07 11:06:00 (6904): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-07 11:06:00 (6904): Guest Log: Further information can be found at the LHC@home message board.
2025-05-07 11:06:35 (6904): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-07 11:06:36 (6904): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-07 11:06:36 (6904): Guest Log: 2.6.3.0 1617 1 30176 145705 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-07 11:06:37 (6904): Guest Log: copied the webapp to /var/www
2025-05-07 11:06:37 (6904): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-07 11:06:37 (6904): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-07 11:06:37 (6904): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-07 11:06:38 (6904): Guest Log:  *** Starting ATLAS job. (PandaID=6636676094 taskID=44506063) ***
2025-05-07 11:16:05 (6904): Guest Log:  *** Job finished ***
2025-05-07 11:16:05 (6904): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:15:52,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:15:53,551 | INFO     | [job] queue monitor thread has finished
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:15:56,134 | INFO     | [data] queue_monitor thread has finished
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:15:56,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332723476288)>', '<ExcThread(monitor, started 140332134029056)>']
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:15:56,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:15:56,560 | INFO     | [monitor] control thread has ended
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,473 | INFO     | all workflow threads have been joined
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,474 | INFO     | end of generic workflow (traces error code: 0)
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,476 | INFO     | traces error code: 0
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,640 [wrapper] ==== pilot stdout END ====
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,646 [wrapper] ==== wrapper stdout RESUME ====
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,653 [wrapper] pilotpid: 5977
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,660 [wrapper] Pilot exit status: 0
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:01,985 [wrapper] pandaids: 6636676094
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:02,081 [wrapper] cleanup supervisor_pilot  5983 5978
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:02,091 [wrapper] Test setup, not cleaning
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:02,098 [wrapper] apfmon messages muted
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:02,110 [wrapper] ==== wrapper stdout END ====
2025-05-07 11:16:05 (6904): Guest Log: 2025-05-07 09:16:02,116 [wrapper] ==== wrapper stderr END ====
2025-05-07 11:16:05 (6904): Guest Log:  *** Error codes and diagnostics ***
2025-05-07 11:16:05 (6904): Guest Log:     "exeErrorCode": 65,
2025-05-07 11:16:05 (6904): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-05-07 11:16:05 (6904): Guest Log:     "pilotErrorCode": 1305,
2025-05-07 11:16:05 (6904): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-05-07 11:16:05 (6904): Guest Log:  *** Listing of results directory ***
2025-05-07 11:16:05 (6904): Guest Log: total 3892
2025-05-07 11:16:05 (6904): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May  7 05:18 pilot3.tar.gz
2025-05-07 11:16:05 (6904): Guest Log: -rwx------. 1 atlas atlas   37140 May  7 05:21 runpilot2-wrapper.sh
2025-05-07 11:16:05 (6904): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May  7 05:21 queuedata.json
2025-05-07 11:16:05 (6904): Guest Log: -rwxr-xr-x. 1 atlas atlas    8161 May  7 09:06 init_data.xml
2025-05-07 11:16:05 (6904): Guest Log: -rwxr-xr-x. 1 atlas atlas  508874 May  7 09:06 input.tar.gz
2025-05-07 11:16:05 (6904): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 May  7 09:06 start_atlas.sh
2025-05-07 11:16:05 (6904): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May  7 09:06 EVNT.44506061._001332.pool.root.1 -> /data/./ATLAS.root_0
2025-05-07 11:16:05 (6904): Guest Log: -rw-r--r--. 1 atlas atlas    2558 May  7 09:06 pandaJob.out
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas     424 May  7 09:06 setup.sh.local
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas  998316 May  7 09:10 agis_schedconf.cvmfs.json
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas 1596741 May  7 09:10 agis_ddmendpoints.agis.ALL.json
2025-05-07 11:16:05 (6904): Guest Log: drwx------. 4 atlas atlas    4096 May  7 09:10 pilot3
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas    1006 May  7 09:13 memory_monitor_summary.json
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas   21252 May  7 09:13 log.44506063._034007.job.log.tgz.1
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas      95 May  7 09:15 pilot_heartbeat.json
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas    8409 May  7 09:15 heartbeat.json
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas    4536 May  7 09:16 pilotlog.txt
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas   84026 May  7 09:16 log.44506063._034007.job.log.1
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas     188 May  7 09:16 output.list
2025-05-07 11:16:05 (6904): Guest Log: -rw-r--r--. 1 atlas atlas     620 May  7 09:16 runtime_log
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas  122880 May  7 09:16 result.tar.gz
2025-05-07 11:16:05 (6904): Guest Log: -rw-r--r--. 1 atlas atlas   10815 May  7 09:16 runtime_log.err
2025-05-07 11:16:05 (6904): Guest Log: -rw-------. 1 atlas atlas     651 May  7 09:16 5vNMDmxOmW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmKx5LDm7B803m.diag
2025-05-07 11:16:05 (6904): Guest Log: Looking for outputfile HITS.44506063._034007.pool.root.1
2025-05-07 11:16:05 (6904): Guest Log: No HITS file was produced
2025-05-07 11:16:05 (6904): Guest Log: Successfully finished the ATLAS job!
2025-05-07 11:16:05 (6904): Guest Log: Copying the results back to the shared directory!
2025-05-07 11:16:05 (6904): Guest Log:  *** Contents of shared directory: ***
2025-05-07 11:16:05 (6904): Guest Log: total 219820
2025-05-07 11:16:05 (6904): Guest Log: -rwxrwxrwx. 1 root root 224429217 May  7 09:02 ATLAS.root_0
2025-05-07 11:16:05 (6904): Guest Log: -rwxrwxrwx. 1 root root      8161 May  7 09:02 init_data.xml
2025-05-07 11:16:05 (6904): Guest Log: -rwxrwxrwx. 1 root root    508874 May  7 07:23 input.tar.gz
2025-05-07 11:16:05 (6904): Guest Log: -rwxrwxrwx. 1 root root    122880 May  7 09:16 result.tar.gz
2025-05-07 11:16:05 (6904): Guest Log: -rwxrwxrwx. 1 root root     17569 May  7 07:23 start_atlas.sh
2025-05-07 11:16:05 (6904): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-07 11:16:05 (6904): VM Completion File Detected.
2025-05-07 11:16:05 (6904): Powering off VM.
2025-05-07 11:16:06 (6904): Successfully stopped VM.
2025-05-07 11:16:06 (6904): Deregistering VM. (boinc_9a22d775f8af3cd8, slot#0)
2025-05-07 11:16:06 (6904): Removing network bandwidth throttle group from VM.
2025-05-07 11:16:06 (6904): Removing VM from VirtualBox.
11:16:11 (6904): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN