Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-07 15:25:21 (3632): Detected: vboxwrapper 26206
2025-05-07 15:25:21 (3632): Detected: BOINC client v8.0.2
2025-05-07 15:25:22 (3632): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-07 15:25:22 (3632): Successfully copied 'init_data.xml' to the shared directory.
2025-05-07 15:25:23 (3632): Create VM. (boinc_7fc4af95a00d6d6c, slot#1)
2025-05-07 15:25:23 (3632): Setting Memory Size for VM. (4600MB)
2025-05-07 15:25:24 (3632): Setting CPU Count for VM. (6)
2025-05-07 15:25:24 (3632): Setting Chipset Options for VM.
2025-05-07 15:25:24 (3632): Setting Graphics Controller Options for VM.
2025-05-07 15:25:24 (3632): Setting Boot Options for VM.
2025-05-07 15:25:25 (3632): Setting Network Configuration for NAT.
2025-05-07 15:25:25 (3632): Enabling VM Network Access.
2025-05-07 15:25:25 (3632): Disabling USB Support for VM.
2025-05-07 15:25:26 (3632): Disabling COM Port Support for VM.
2025-05-07 15:25:26 (3632): Disabling LPT Port Support for VM.
2025-05-07 15:25:26 (3632): Disabling Audio Support for VM.
2025-05-07 15:25:26 (3632): Disabling Clipboard Support for VM.
2025-05-07 15:25:27 (3632): Disabling Drag and Drop Support for VM.
2025-05-07 15:25:27 (3632): Adding storage controller(s) to VM.
2025-05-07 15:25:27 (3632): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-07 15:25:30 (3632): Adding VirtualBox Guest Additions to VM.
2025-05-07 15:25:31 (3632): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-07 15:25:31 (3632): forwarding host port 61953 to guest port 80
2025-05-07 15:25:31 (3632): Enabling remote desktop for VM.
2025-05-07 15:25:31 (3632): Required extension pack not installed, remote desktop not enabled.
2025-05-07 15:25:31 (3632): Enabling shared directory for VM.
2025-05-07 15:25:32 (3632): Starting VM using VBoxManage interface. (boinc_7fc4af95a00d6d6c, slot#1)
2025-05-07 15:25:37 (3632): Successfully started VM. (PID = '22088')
2025-05-07 15:25:37 (3632): Reporting VM Process ID to BOINC.
2025-05-07 15:25:37 (3632): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-07 15:25:37 (3632): Guest Log: CPUID EDX: 0x178bfbff
2025-05-07 15:25:37 (3632): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-07 15:25:37 (3632): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-07 15:25:37 (3632): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-07 15:25:37 (3632): Detected: Web Application Enabled (http://localhost:61953)
2025-05-07 15:25:37 (3632): Preference change detected
2025-05-07 15:25:37 (3632): Setting CPU throttle for VM. (100%)
2025-05-07 15:25:37 (3632): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-07 15:25:39 (3632): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-07 15:25:39 (3632): Guest Log: BIOS: Booting from Hard Disk...
2025-05-07 15:25:41 (3632): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-07 15:25:41 (3632): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-07 15:25:41 (3632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-07 15:25:46 (3632): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-07 15:25:46 (3632): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-07 15:25:49 (3632): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000095 main     Log opened 2025-05-07T15:25:47.214812000Z
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000159 main     OS Product: Linux
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000178 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000194 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000209 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000209 main     Process ID: 1332
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000210 main     Package type: LINUX_64BITS_GENERIC
2025-05-07 15:25:49 (3632): Guest Log: 00:00:00.000657 main     5.2.32 r132073 started. Verbose level = 0
2025-05-07 15:25:49 (3632): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-07 15:25:49 (3632): Guest Log: [INFO] Mounting shared directory
2025-05-07 15:25:49 (3632): Guest Log: [INFO] Checking for init_data.xml
2025-05-07 15:25:57 (3632): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-07 15:25:57 (3632): Guest Log: [INFO] Detected branch: prod
2025-05-07 15:25:58 (3632): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-07 15:25:58 (3632): Guest Log: Copying input files
2025-05-07 15:25:58 (3632): Guest Log: Copied input files into RunAtlas.
2025-05-07 15:25:58 (3632): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-07 15:25:58 (3632): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-07 15:25:58 (3632): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-07 15:25:58 (3632): Guest Log: Further information can be found at the LHC@home message board.
2025-05-07 15:25:58 (3632): Guest Log: 00:00:10.007269 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 482 208 000ns (GuestNow=1 746 602 758 733 868 000 ns GuestLast=1 746 631 547 216 076 000 ns fSetTimeLastLoop=true )
2025-05-07 15:26:09 (3632): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-07 15:26:09 (3632): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-07 15:26:09 (3632): Guest Log: 2.6.3.0 1612 0 32228 145704 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-07 15:26:09 (3632): Guest Log: copied the webapp to /var/www
2025-05-07 15:26:09 (3632): Guest Log: ATHENA_PROC_NUMBER=6
2025-05-07 15:26:09 (3632): Guest Log: ATHENA_CORE_NUMBER=6
2025-05-07 15:26:10 (3632): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-07 15:26:10 (3632): Guest Log:  *** Starting ATLAS job. (PandaID=6636441881 taskID=44506063) ***
2025-05-07 16:27:31 (3632): Guest Log:  *** Job finished ***
2025-05-07 16:27:31 (3632): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:16,872 | INFO     | [data] queue_monitor thread has finished
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:23,083 | INFO     | job.realtimelogging is not enabled
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:24,090 | INFO     | [payload] run_realtimelog thread has finished
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:25,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198437939008)>', '<ExcThread(monitor, started 140197714974464)>']
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:25,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:25,516 | INFO     | [monitor] control thread has ended
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,218 | INFO     | all workflow threads have been joined
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,218 | INFO     | end of generic workflow (traces error code: 0)
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,219 | INFO     | traces error code: 0
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,278 [wrapper] ==== pilot stdout END ====
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,282 [wrapper] ==== wrapper stdout RESUME ====
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,285 [wrapper] pilotpid: 5969
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,289 [wrapper] Pilot exit status: 0
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,614 [wrapper] pandaids: 6636441881
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,633 [wrapper] cleanup supervisor_pilot 22308 5970
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,636 [wrapper] Test setup, not cleaning
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,639 [wrapper] apfmon messages muted
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,641 [wrapper] ==== wrapper stdout END ====
2025-05-07 16:27:31 (3632): Guest Log: 2025-05-07 08:27:30,643 [wrapper] ==== wrapper stderr END ====
2025-05-07 16:27:31 (3632): Guest Log:  *** Error codes and diagnostics ***
2025-05-07 16:27:31 (3632): Guest Log:     "exeErrorCode": 0,
2025-05-07 16:27:31 (3632): Guest Log:     "exeErrorDiag": "",
2025-05-07 16:27:31 (3632): Guest Log:     "pilotErrorCode": 0,
2025-05-07 16:27:31 (3632): Guest Log:     "pilotErrorDiag": "",
2025-05-07 16:27:31 (3632): Guest Log:  *** Listing of results directory ***
2025-05-07 16:27:31 (3632): Guest Log: total 205572
2025-05-07 16:27:31 (3632): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  7 03:28 pilot3.tar.gz
2025-05-07 16:27:31 (3632): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  7 03:30 queuedata.json
2025-05-07 16:27:31 (3632): Guest Log: -rwx------. 1 atlas atlas     37140 May  7 03:30 runpilot2-wrapper.sh
2025-05-07 16:27:31 (3632): Guest Log: -rwxr-xr-x. 1 atlas atlas      8940 May  7 07:25 init_data.xml
2025-05-07 16:27:31 (3632): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 May  7 07:25 input.tar.gz
2025-05-07 16:27:31 (3632): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  7 07:25 start_atlas.sh
2025-05-07 16:27:31 (3632): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  7 07:25 EVNT.44506061._001275.pool.root.1 -> /data/./ATLAS.root_0
2025-05-07 16:27:31 (3632): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May  7 07:26 pandaJob.out
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas       424 May  7 07:26 setup.sh.local
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas    998300 May  7 07:27 agis_schedconf.cvmfs.json
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas   1596741 May  7 07:27 agis_ddmendpoints.agis.ALL.json
2025-05-07 16:27:31 (3632): Guest Log: drwx------. 4 atlas atlas      4096 May  7 07:27 pilot3
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas 205518971 May  7 08:26 HITS.44506063._032473.pool.root.1
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas        95 May  7 08:26 pilot_heartbeat.json
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas      1016 May  7 08:27 memory_monitor_summary.json
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas    265288 May  7 08:27 log.44506063._032473.job.log.tgz.1
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas      7692 May  7 08:27 heartbeat.json
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas      4485 May  7 08:27 pilotlog.txt
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas    337516 May  7 08:27 log.44506063._032473.job.log.1
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas       357 May  7 08:27 output.list
2025-05-07 16:27:31 (3632): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  7 08:27 runtime_log
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas    624640 May  7 08:27 result.tar.gz
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas       652 May  7 08:27 wNmLDm4ekW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYh5LDmg5aVCn.diag
2025-05-07 16:27:31 (3632): Guest Log: -rw-r--r--. 1 atlas atlas     10941 May  7 08:27 runtime_log.err
2025-05-07 16:27:31 (3632): Guest Log: Looking for outputfile HITS.44506063._032473.pool.root.1
2025-05-07 16:27:31 (3632): Guest Log: HITS file was successfully produced
2025-05-07 16:27:31 (3632): Guest Log: -rw-------. 1 atlas atlas 205518971 May  7 08:26 /home/atlas/RunAtlas/HITS.44506063._032473.pool.root.1
2025-05-07 16:27:32 (3632): Guest Log: Successfully finished the ATLAS job!
2025-05-07 16:27:32 (3632): Guest Log: Copying the results back to the shared directory!
2025-05-07 16:27:32 (3632): Guest Log:  *** Contents of shared directory: ***
2025-05-07 16:27:32 (3632): Guest Log: total 422164
2025-05-07 16:27:32 (3632): Guest Log: -rwxrwxrwx. 1 root root 225603436 May  7 07:25 ATLAS.root_0
2025-05-07 16:27:32 (3632): Guest Log: -rwxrwxrwx. 1 root root 205518971 May  7 08:27 HITS.pool.root.1
2025-05-07 16:27:32 (3632): Guest Log: -rwxrwxrwx. 1 root root      8940 May  7 07:25 init_data.xml
2025-05-07 16:27:32 (3632): Guest Log: -rwxrwxrwx. 1 root root    508880 May  7 05:36 input.tar.gz
2025-05-07 16:27:32 (3632): Guest Log: -rwxrwxrwx. 1 root root    624640 May  7 08:27 result.tar.gz
2025-05-07 16:27:32 (3632): Guest Log: -rwxrwxrwx. 1 root root     17569 May  7 05:36 start_atlas.sh
2025-05-07 16:27:32 (3632): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-07 16:27:32 (3632): VM Completion File Detected.
2025-05-07 16:27:32 (3632): Powering off VM.
2025-05-07 16:27:32 (3632): Successfully stopped VM.
2025-05-07 16:27:32 (3632): Deregistering VM. (boinc_7fc4af95a00d6d6c, slot#1)
2025-05-07 16:27:32 (3632): Removing network bandwidth throttle group from VM.
2025-05-07 16:27:33 (3632): Removing VM from VirtualBox.
16:27:38 (3632): called boinc_finish(0)

</stderr_txt>
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