Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:05:47 (2403851): wrapper (7.7.26015): starting
18:05:47 (2403851): wrapper: running run_atlas (--nthreads 2)
[2025-05-07 18:05:47] Arguments: --nthreads 2
[2025-05-07 18:05:47] Threads: 2
[2025-05-07 18:05:47] Checking for CVMFS
[2025-05-07 18:05:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 18:05:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 18:05:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 18:05:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 18:05:47] 2.9.2.0 1701116 3289 59276 145717 1 56 20093445 36864000 0 130560 0 1754381 99.988 789474 16357 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-07 18:05:47] CVMFS is ok
[2025-05-07 18:05:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-07 18:05:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-07 18:05:47] Further information can be found at the LHC@home message board.
[2025-05-07 18:05:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 18:05:47] Checking for apptainer binary...
[2025-05-07 18:05:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 18:05:47] Running /usr/bin/apptainer --version
[2025-05-07 18:05:47] apptainer version 1.3.6-6.1
[2025-05-07 18:05:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 18:05:47] atlasA219
[2025-05-07 18:05:47] apptainer works
[2025-05-07 18:05:47] Set ATHENA_PROC_NUMBER=2
[2025-05-07 18:05:47] Set ATHENA_CORE_NUMBER=2
[2025-05-07 18:05:47] Starting ATLAS job with PandaID=6619896441
[2025-05-07 18:05:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-07 21:44:07]  *** The last 200 lines of the pilot log: ***
[2025-05-07 21:44:07] 2025-05-07 19:43:47,292 | INFO     | extracted standard info from prmon json
[2025-05-07 21:44:07] 2025-05-07 19:43:47,292 | INFO     | extracted standard memory fields from prmon json
[2025-05-07 21:44:07] 2025-05-07 19:43:47,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-07 21:44:07] 2025-05-07 19:43:47,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-07 21:44:07] 2025-05-07 19:43:47,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-07 21:44:07] 2025-05-07 19:43:47,295 | INFO     | fitting pss+swap vs Time
[2025-05-07 21:44:07] 2025-05-07 19:43:47,295 | INFO     | sum of square deviations: 3038856977.5
[2025-05-07 21:44:07] 2025-05-07 19:43:47,295 | INFO     | sum of deviations: 39905651152.49998
[2025-05-07 21:44:07] 2025-05-07 19:43:47,296 | INFO     | mean x: 1746640485.5
[2025-05-07 21:44:07] 2025-05-07 19:43:47,296 | INFO     | mean y: 2285982.6775700934
[2025-05-07 21:44:07] 2025-05-07 19:43:47,296 | INFO     | -- intersect: -22934241277.166527
[2025-05-07 21:44:07] 2025-05-07 19:43:47,296 | INFO     | intersect: -22934241277.166527
[2025-05-07 21:44:07] 2025-05-07 19:43:47,296 | INFO     | chi2: 2.921996536599047
[2025-05-07 21:44:07] 2025-05-07 19:43:47,296 | INFO     | sum of square deviations: 2830787960.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | sum of deviations: 39060351247.00001
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | mean x: 1746640333.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | mean y: 2285362.995215311
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | -- intersect: -24098560717.032997
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | intersect: -24098560717.032997
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | chi2: 2.9244137581621645
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | current chi2=2.9244137581621645 (change=-0.08272499754332222 %)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | right removable region: 208
[2025-05-07 21:44:07] 2025-05-07 19:43:47,297 | INFO     | sum of square deviations: 2830787960.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | sum of deviations: -288005888.00000274
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | mean x: 1746640638.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | mean y: 2315311.1435406697
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | -- intersect: 180019468.103457
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | intersect: 180019468.103457
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | chi2: 1.0576496273038538
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | current chi2=1.0576496273038538 (change=63.803871289496215 %)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,298 | INFO     | sum of square deviations: 2632440055.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | sum of deviations: -30798860441.499992
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | mean x: 1746640790.5
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | mean y: 2338812.387254902
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | -- intersect: 20437579434.814545
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | intersect: 20437579434.814545
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | chi2: 0.0815200564433626
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | current chi2=0.0815200564433626 (change=92.29233818659091 %)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | sum of square deviations: 2443580700.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | sum of deviations: -30330434701.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | mean x: 1746640943.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,299 | INFO     | mean y: 2338407.2412060304
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | -- intersect: 21682154043.268517
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | intersect: 21682154043.268517
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | chi2: 0.0698082826236169
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | current chi2=0.0698082826236169 (change=14.366739095528787 %)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | left removable region: 30
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | sum of square deviations: 1748737904.5
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | sum of deviations: -21959283555.0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | mean x: 1746641217.5
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | mean y: 2332151.4606741574
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | -- intersect: 21935287150.16839
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | intersect: 21935287150.16839
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | chi2: 0.06637177214411993
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | -- intersect: 21935287150.16839
[2025-05-07 21:44:07] 2025-05-07 19:43:47,300 | INFO     | current memory leak: -12.56 B/s (using 178 data points, chi2=0.07)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | ..............................
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . Timing measurements:
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . get job = 0 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . initial setup = 1 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . payload setup = 7 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . stage-in = 0 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . payload execution = 13026 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . stage-out = 0 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | . log creation = 0 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,301 | INFO     | ..............................
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | 
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | job summary report
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | --------------------------------------------------
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | PanDA job id: 6619896441
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | task id: 44270688
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | errors: (none)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-07 21:44:07] 2025-05-07 19:43:47,330 | INFO     | pilot state: finished 
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | transexitcode: 0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | exeerrorcode: 0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | exeerrordiag: 
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | exitcode: 0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | exitmsg: OK
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | cpuconsumptiontime: 24790 s
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | nevents: 400
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | neventsw: 0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | pid: 2413903
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | pgrp: 2413903
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | corecount: 2
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | event service: False
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | sizes: {0: 2393617, 8: 2393823, 10: 2393851, 13038: 2423843, 13039: 2432846, 13049: 2432960}
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | --------------------------------------------------
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | 
[2025-05-07 21:44:07] 2025-05-07 19:43:47,331 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,342 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,343 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-07 21:44:07] 2025-05-07 19:43:47,343 | INFO     | job 6619896441 has completed (purged errors)
[2025-05-07 21:44:07] 2025-05-07 19:43:47,343 | INFO     | overall cleanup function is called
[2025-05-07 21:44:07] 2025-05-07 19:43:47,386 | INFO     | PID=2407492 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-07 21:44:07] 2025-05-07 19:43:48,349 | INFO     | --- collectZombieJob: --- 10, [2413903]
[2025-05-07 21:44:07] 2025-05-07 19:43:48,350 | INFO     | zombie collector waiting for pid 2413903
[2025-05-07 21:44:07] 2025-05-07 19:43:48,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-07 21:44:07] 2025-05-07 19:43:48,350 | INFO     | collected zombie processes
[2025-05-07 21:44:07] 2025-05-07 19:43:48,350 | INFO     | will attempt to kill all subprocesses of pid=2413903
[2025-05-07 21:44:07] 2025-05-07 19:43:48,391 | INFO     | process IDs to be killed: [2413903] (in reverse order)
[2025-05-07 21:44:07] 2025-05-07 19:43:48,414 | WARNING  | found no corresponding commands to process id(s)
[2025-05-07 21:44:07] 2025-05-07 19:43:48,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-07 21:44:07] 2025-05-07 19:43:48,415 | INFO     | did not find any defunct processes belonging to 2413903
[2025-05-07 21:44:07] 2025-05-07 19:43:48,416 | INFO     | did not find any defunct processes belonging to 2413903
[2025-05-07 21:44:07] 2025-05-07 19:43:48,416 | INFO     | ready for new job
[2025-05-07 21:44:07] 2025-05-07 19:43:48,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-07 21:44:07] 2025-05-07 19:43:48,417 | INFO     | **************************************
[2025-05-07 21:44:07] 2025-05-07 19:43:48,417 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-07 21:44:07] 2025-05-07 19:43:48,417 | INFO     | **************************************
[2025-05-07 21:44:07] 2025-05-07 19:43:48,417 | INFO     | 
[2025-05-07 21:44:07] 2025-05-07 19:43:48,417 | INFO     | architecture information:
[2025-05-07 21:44:07] 2025-05-07 19:43:48,417 | INFO     | executing command: cat /etc/os-release
[2025-05-07 21:44:07] 2025-05-07 19:43:48,426 | INFO     | cat /etc/os-release:
[2025-05-07 21:44:07] NAME="CentOS Linux"
[2025-05-07 21:44:07] VERSION="7 (Core)"
[2025-05-07 21:44:07] ID="centos"
[2025-05-07 21:44:07] ID_LIKE="rhel fedora"
[2025-05-07 21:44:07] VERSION_ID="7"
[2025-05-07 21:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-07 21:44:07] ANSI_COLOR="0;31"
[2025-05-07 21:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-07 21:44:07] HOME_URL="https://www.centos.org/"
[2025-05-07 21:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-07 21:44:07] 
[2025-05-07 21:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-07 21:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-07 21:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-07 21:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-07 21:44:07] 
[2025-05-07 21:44:07] 2025-05-07 19:43:48,426 | INFO     | **************************************
[2025-05-07 21:44:07] 2025-05-07 19:43:48,929 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-07 21:44:07] 2025-05-07 19:43:48,941 | INFO     | sufficient remaining disk space (185528745984 B)
[2025-05-07 21:44:07] 2025-05-07 19:43:48,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-07 21:44:07] 2025-05-07 19:43:48,942 | INFO     | current server update state: UPDATING_FINAL
[2025-05-07 21:44:07] 2025-05-07 19:43:48,942 | INFO     | update_server=False
[2025-05-07 21:44:07] 2025-05-07 19:43:48,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-07 21:44:07] 2025-05-07 19:43:48,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-07 21:44:07] 2025-05-07 19:43:48,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-07 21:44:07] 2025-05-07 19:43:48,942 | INFO     | aborting loop
[2025-05-07 21:44:07] 2025-05-07 19:43:49,391 | INFO     | found 0 job(s) in 20 queues
[2025-05-07 21:44:07] 2025-05-07 19:43:49,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-07 21:44:07] 2025-05-07 19:43:49,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-07 21:44:07] 2025-05-07 19:43:49,435 | INFO     | all data control threads have been joined
[2025-05-07 21:44:07] 2025-05-07 19:43:49,740 | INFO     | all payload control threads have been joined
[2025-05-07 21:44:07] 2025-05-07 19:43:49,946 | INFO     | [job] retrieve thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:49,947 | INFO     | [job] queue monitor thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:49,948 | INFO     | [job] job monitor thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-07 21:44:07] 2025-05-07 19:43:50,108 | INFO     | [payload] validate_post thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,222 | INFO     | [payload] execute_payloads thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,405 | INFO     | all job control threads have been joined
[2025-05-07 21:44:07] 2025-05-07 19:43:50,441 | INFO     | [data] control thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,628 | INFO     | [job] validate thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,681 | INFO     | [payload] validate_pre thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,725 | INFO     | [job] create_data_payload thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,746 | INFO     | [payload] control thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:50,862 | INFO     | [data] copytool_in thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:51,276 | INFO     | [payload] failed_post thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:51,411 | INFO     | [job] control thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:52,021 | INFO     | [data] copytool_out thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:52,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-07 21:44:07] 2025-05-07 19:43:56,045 | INFO     | [data] queue_monitor thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:43:59,582 | INFO     | job.realtimelogging is not enabled
[2025-05-07 21:44:07] 2025-05-07 19:44:00,588 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-07 21:44:07] 2025-05-07 19:44:02,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051642210112)>', '<ExcThread(monitor, started 140051149215488)>']
[2025-05-07 21:44:07] 2025-05-07 19:44:03,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-07 21:44:07] 2025-05-07 19:44:03,467 | INFO     | [monitor] control thread has ended
[2025-05-07 21:44:07] 2025-05-07 19:44:07,588 | INFO     | all workflow threads have been joined
[2025-05-07 21:44:07] 2025-05-07 19:44:07,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-07 21:44:07] 2025-05-07 19:44:07,590 | INFO     | traces error code: 0
[2025-05-07 21:44:07] 2025-05-07 19:44:07,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-07 21:44:07] 2025-05-07 19:44:07,634 [wrapper] ==== pilot stdout END ====
[2025-05-07 21:44:07] 2025-05-07 19:44:07,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-07 21:44:07] 2025-05-07 19:44:07,639 [wrapper] pilotpid: 2407492
[2025-05-07 21:44:07] 2025-05-07 19:44:07,642 [wrapper] Pilot exit status: 0
[2025-05-07 21:44:07] 2025-05-07 19:44:07,648 [wrapper] pandaids: 6619896441
[2025-05-07 21:44:07] 2025-05-07 19:44:07,663 [wrapper] cleanup supervisor_pilot 2438601 2407493
[2025-05-07 21:44:07] 2025-05-07 19:44:07,665 [wrapper] Test setup, not cleaning
[2025-05-07 21:44:07] 2025-05-07 19:44:07,667 [wrapper] apfmon messages muted
[2025-05-07 21:44:07] 2025-05-07 19:44:07,669 [wrapper] ==== wrapper stdout END ====
[2025-05-07 21:44:07] 2025-05-07 19:44:07,671 [wrapper] ==== wrapper stderr END ====
[2025-05-07 21:44:07]  *** Error codes and diagnostics ***
[2025-05-07 21:44:07]     "exeErrorCode": 0,
[2025-05-07 21:44:07]     "exeErrorDiag": "",
[2025-05-07 21:44:07]     "pilotErrorCode": 0,
[2025-05-07 21:44:07]     "pilotErrorDiag": "",
[2025-05-07 21:44:07]  *** Listing of results directory ***
[2025-05-07 21:44:07] total 419036
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc    495897 Apr 28 23:09 pilot3.tar.gz
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc      5111 Apr 28 23:27 queuedata.json
[2025-05-07 21:44:07] -rwx------ 1 boinc boinc     37140 Apr 28 23:27 runpilot2-wrapper.sh
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc       100 May  7 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-07 21:44:07] -rwxr-xr-x 1 boinc boinc      7986 May  7 18:05 run_atlas
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc       105 May  7 18:05 job.xml
[2025-05-07 21:44:07] -rw-r--r-- 2 boinc boinc 216965554 May  7 18:05 EVNT.44270686._000080.pool.root.1
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc      6691 May  7 18:05 init_data.xml
[2025-05-07 21:44:07] drwxrwx--x 2 boinc boinc      4096 May  7 18:05 shared
[2025-05-07 21:44:07] -rw-r--r-- 2 boinc boinc    508852 May  7 18:05 input.tar.gz
[2025-05-07 21:44:07] -rw-r--r-- 2 boinc boinc     17569 May  7 18:05 start_atlas.sh
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc         0 May  7 18:05 boinc_lockfile
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc      2467 May  7 18:05 pandaJob.out
[2025-05-07 21:44:07] -rw------- 1 boinc boinc       424 May  7 18:05 setup.sh.local
[2025-05-07 21:44:07] -rw------- 1 boinc boinc    997869 May  7 18:05 agis_schedconf.cvmfs.json
[2025-05-07 21:44:07] drwx------ 4 boinc boinc      4096 May  7 18:06 pilot3
[2025-05-07 21:44:07] -rw------- 1 boinc boinc        95 May  7 21:43 pilot_heartbeat.json
[2025-05-07 21:44:07] -rw------- 1 boinc boinc 205303346 May  7 21:43 HITS.44270688._001985.pool.root.1
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc       530 May  7 21:43 boinc_task_state.xml
[2025-05-07 21:44:07] -rw------- 1 boinc boinc      1019 May  7 21:43 memory_monitor_summary.json
[2025-05-07 21:44:07] -rw------- 1 boinc boinc   1596741 May  7 21:43 agis_ddmendpoints.agis.ALL.json
[2025-05-07 21:44:07] -rw------- 1 boinc boinc    287389 May  7 21:43 log.44270688._001985.job.log.tgz.1
[2025-05-07 21:44:07] -rw------- 1 boinc boinc      7662 May  7 21:43 heartbeat.json
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc      8192 May  7 21:44 boinc_mmap_file
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc        28 May  7 21:44 wrapper_checkpoint.txt
[2025-05-07 21:44:07] -rw------- 1 boinc boinc      4429 May  7 21:44 pilotlog.txt
[2025-05-07 21:44:07] -rw------- 1 boinc boinc   1201970 May  7 21:44 log.44270688._001985.job.log.1
[2025-05-07 21:44:07] -rw------- 1 boinc boinc       357 May  7 21:44 output.list
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc       620 May  7 21:44 runtime_log
[2025-05-07 21:44:07] -rw------- 1 boinc boinc   1505280 May  7 21:44 result.tar.gz
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc     11115 May  7 21:44 runtime_log.err
[2025-05-07 21:44:07] -rw------- 1 boinc boinc       665 May  7 21:44 ifXLDmEClT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm59CLDm1nBRQn.diag
[2025-05-07 21:44:07] -rw-r--r-- 1 boinc boinc     20842 May  7 21:44 stderr.txt
[2025-05-07 21:44:07] HITS file was successfully produced:
[2025-05-07 21:44:07] -rw------- 1 boinc boinc 205303346 May  7 21:43 shared/HITS.pool.root.1
[2025-05-07 21:44:07]  *** Contents of shared directory: ***
[2025-05-07 21:44:07] total 414372
[2025-05-07 21:44:07] -rw-r--r-- 2 boinc boinc 216965554 May  7 18:05 ATLAS.root_0
[2025-05-07 21:44:07] -rw-r--r-- 2 boinc boinc    508852 May  7 18:05 input.tar.gz
[2025-05-07 21:44:07] -rw-r--r-- 2 boinc boinc     17569 May  7 18:05 start_atlas.sh
[2025-05-07 21:44:07] -rw------- 1 boinc boinc 205303346 May  7 21:43 HITS.pool.root.1
[2025-05-07 21:44:07] -rw------- 1 boinc boinc   1505280 May  7 21:44 result.tar.gz
21:44:09 (2403851): run_atlas exited; CPU time 24861.579041
21:44:09 (2403851): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN