Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-06 23:14:52 (2588): Detected: vboxwrapper 26206
2025-05-06 23:14:52 (2588): Detected: BOINC client v7.24.1
2025-05-06 23:14:53 (2588): Detected: VirtualBox VboxManage Interface (Version: 6.0.24)
2025-05-06 23:14:53 (2588): Successfully copied 'init_data.xml' to the shared directory.
2025-05-06 23:14:54 (2588): Create VM. (boinc_c31078c034261ae0, slot#0)
2025-05-06 23:14:56 (2588): Setting Memory Size for VM. (4200MB)
2025-05-06 23:14:57 (2588): Setting CPU Count for VM. (2)
2025-05-06 23:14:58 (2588): Setting Chipset Options for VM.
2025-05-06 23:14:59 (2588): Setting Graphics Controller Options for VM.
2025-05-06 23:15:00 (2588): Setting Boot Options for VM.
2025-05-06 23:15:00 (2588): Setting Network Configuration for NAT.
2025-05-06 23:15:01 (2588): Enabling VM Network Access.
2025-05-06 23:15:02 (2588): Disabling USB Support for VM.
2025-05-06 23:15:02 (2588): Disabling COM Port Support for VM.
2025-05-06 23:15:03 (2588): Disabling LPT Port Support for VM.
2025-05-06 23:15:03 (2588): Disabling Audio Support for VM.
2025-05-06 23:15:04 (2588): Disabling Clipboard Support for VM.
2025-05-06 23:15:05 (2588): Disabling Drag and Drop Support for VM.
2025-05-06 23:15:05 (2588): Adding storage controller(s) to VM.
2025-05-06 23:15:06 (2588): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-06 23:15:07 (2588): Adding VirtualBox Guest Additions to VM.
2025-05-06 23:15:07 (2588): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-06 23:15:07 (2588): forwarding host port 53347 to guest port 80
2025-05-06 23:15:08 (2588): Enabling remote desktop for VM.
2025-05-06 23:15:08 (2588): Enabling shared directory for VM.
2025-05-06 23:15:09 (2588): Starting VM using VBoxManage interface. (boinc_c31078c034261ae0, slot#0)
2025-05-06 23:15:14 (2588): Successfully started VM. (PID = '1284')
2025-05-06 23:15:14 (2588): Reporting VM Process ID to BOINC.
2025-05-06 23:15:14 (2588): Guest Log: BIOS: VirtualBox 6.0.24
2025-05-06 23:15:14 (2588): Guest Log: CPUID EDX: 0x178bfbff
2025-05-06 23:15:14 (2588): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-06 23:15:14 (2588): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-06 23:15:14 (2588): Detected: Web Application Enabled (http://localhost:53347)
2025-05-06 23:15:14 (2588): Detected: Remote Desktop Enabled (localhost:53348)
2025-05-06 23:15:14 (2588): Preference change detected
2025-05-06 23:15:14 (2588): Setting CPU throttle for VM. (100%)
2025-05-06 23:15:14 (2588): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-06 23:15:16 (2588): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-06 23:15:16 (2588): Guest Log: BIOS: Booting from Hard Disk...
2025-05-06 23:15:20 (2588): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-06 23:15:20 (2588): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-06 23:15:20 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-06 23:15:32 (2588): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-06 23:15:32 (2588): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-06 23:15:59 (2588): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.000193 main     Log opened 2025-05-07T04:15:57.798659000Z
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.000351 main     OS Product: Linux
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.000386 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.000417 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.000449 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.000450 main     Process ID: 1233
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.000451 main     Package type: LINUX_64BITS_GENERIC
2025-05-06 23:15:59 (2588): Guest Log: 00:00:00.001715 main     5.2.32 r132073 started. Verbose level = 0
2025-05-06 23:16:05 (2588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-06 23:16:05 (2588): Guest Log: [INFO] Mounting shared directory
2025-05-06 23:16:10 (2588): Guest Log: [INFO] Checking for init_data.xml
2025-05-06 23:16:21 (2588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-06 23:16:21 (2588): Guest Log: [INFO] Detected branch: prod
2025-05-06 23:16:22 (2588): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-06 23:16:22 (2588): Guest Log: Copying input files
2025-05-06 23:16:24 (2588): Guest Log: Copied input files into RunAtlas.
2025-05-06 23:16:24 (2588): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-06 23:16:24 (2588): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-06 23:16:24 (2588): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-06 23:16:24 (2588): Guest Log: Further information can be found at the LHC@home message board.
2025-05-06 23:17:20 (2588): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-06 23:17:20 (2588): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-06 23:17:20 (2588): Guest Log: 2.6.3.0 1527 1 32020 145700 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-06 23:17:29 (2588): Guest Log: copied the webapp to /var/www
2025-05-06 23:17:29 (2588): Guest Log: ATHENA_PROC_NUMBER=2
2025-05-06 23:17:29 (2588): Guest Log: ATHENA_CORE_NUMBER=2
2025-05-06 23:17:29 (2588): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-06 23:17:29 (2588): Guest Log:  *** Starting ATLAS job. (PandaID=6636438874 taskID=44506063) ***
2025-05-06 23:31:22 (2588): Guest Log:  *** Job finished ***
2025-05-06 23:31:22 (2588): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:10,781 | INFO     | [job] control thread has finished
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:11,140 | INFO     | [data] copytool_out thread has finished
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:13,641 | INFO     | [data] queue_monitor thread has finished
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:15,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239333173056)>', '<ExcThread(monitor, started 140238601058048)>']
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:16,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:16,145 | INFO     | [monitor] control thread has ended
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,317 | INFO     | all workflow threads have been joined
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,317 | INFO     | end of generic workflow (traces error code: 0)
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,317 | INFO     | traces error code: 0
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,479 [wrapper] ==== pilot stdout END ====
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,494 [wrapper] ==== wrapper stdout RESUME ====
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,506 [wrapper] pilotpid: 5873
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,519 [wrapper] Pilot exit status: 0
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,709 [wrapper] pandaids: 6636438874
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,774 [wrapper] cleanup supervisor_pilot  5879 5874
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,788 [wrapper] Test setup, not cleaning
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,801 [wrapper] apfmon messages muted
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,813 [wrapper] ==== wrapper stdout END ====
2025-05-06 23:31:22 (2588): Guest Log: 2025-05-07 04:31:20,823 [wrapper] ==== wrapper stderr END ====
2025-05-06 23:31:22 (2588): Guest Log:  *** Error codes and diagnostics ***
2025-05-06 23:31:22 (2588): Guest Log:     "exeErrorCode": 65,
2025-05-06 23:31:22 (2588): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5600.97 KB/s",
2025-05-06 23:31:22 (2588): Guest Log:     "pilotErrorCode": 1305,
2025-05-06 23:31:22 (2588): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5600.97 KB/s",
2025-05-06 23:31:22 (2588): Guest Log:  *** Listing of results directory ***
2025-05-06 23:31:22 (2588): Guest Log: total 4160
2025-05-06 23:31:22 (2588): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May  7 00:25 pilot3.tar.gz
2025-05-06 23:31:22 (2588): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May  7 01:03 queuedata.json
2025-05-06 23:31:22 (2588): Guest Log: -rwx------. 1 atlas atlas   37140 May  7 01:05 runpilot2-wrapper.sh
2025-05-06 23:31:22 (2588): Guest Log: -rwxr-xr-x. 1 atlas atlas    6331 May  7 04:16 init_data.xml
2025-05-06 23:31:22 (2588): Guest Log: -rwxr-xr-x. 1 atlas atlas  508885 May  7 04:16 input.tar.gz
2025-05-06 23:31:22 (2588): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 May  7 04:16 start_atlas.sh
2025-05-06 23:31:22 (2588): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May  7 04:16 EVNT.44506061._000038.pool.root.1 -> /data/./ATLAS.root_0
2025-05-06 23:31:22 (2588): Guest Log: -rw-r--r--. 1 atlas atlas    2551 May  7 04:17 pandaJob.out
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas     424 May  7 04:17 setup.sh.local
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas  998308 May  7 04:20 agis_schedconf.cvmfs.json
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas 1596741 May  7 04:20 agis_ddmendpoints.agis.ALL.json
2025-05-06 23:31:22 (2588): Guest Log: drwx------. 4 atlas atlas    4096 May  7 04:21 pilot3
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas   50466 May  7 04:28 log.44506063._031104.job.log.tgz.1
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas      95 May  7 04:30 pilot_heartbeat.json
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas    8253 May  7 04:31 heartbeat.json
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas    4722 May  7 04:31 pilotlog.txt
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas  192266 May  7 04:31 log.44506063._031104.job.log.1
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas     188 May  7 04:31 output.list
2025-05-06 23:31:22 (2588): Guest Log: -rw-r--r--. 1 atlas atlas     620 May  7 04:31 runtime_log
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas  266240 May  7 04:31 result.tar.gz
2025-05-06 23:31:22 (2588): Guest Log: -rw-r--r--. 1 atlas atlas   10785 May  7 04:31 runtime_log.err
2025-05-06 23:31:22 (2588): Guest Log: -rw-------. 1 atlas atlas     642 May  7 04:31 OueNDmYPiW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4S5LDmB8W1Go.diag
2025-05-06 23:31:22 (2588): Guest Log: Looking for outputfile HITS.44506063._031104.pool.root.1
2025-05-06 23:31:22 (2588): Guest Log: No HITS file was produced
2025-05-06 23:31:22 (2588): Guest Log: Successfully finished the ATLAS job!
2025-05-06 23:31:22 (2588): Guest Log: Copying the results back to the shared directory!
2025-05-06 23:31:22 (2588): Guest Log:  *** Contents of shared directory: ***
2025-05-06 23:31:22 (2588): Guest Log: total 221684
2025-05-06 23:31:22 (2588): Guest Log: -rwxrwxrwx. 1 root root 226194704 May  7 04:14 ATLAS.root_0
2025-05-06 23:31:22 (2588): Guest Log: -rwxrwxrwx. 1 root root      6331 May  7 04:14 init_data.xml
2025-05-06 23:31:22 (2588): Guest Log: -rwxrwxrwx. 1 root root    508885 May  7 04:12 input.tar.gz
2025-05-06 23:31:22 (2588): Guest Log: -rwxrwxrwx. 1 root root    266240 May  7  2025 result.tar.gz
2025-05-06 23:31:22 (2588): Guest Log: -rwxrwxrwx. 1 root root     17569 May  7 04:12 start_atlas.sh
2025-05-06 23:31:22 (2588): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-06 23:31:22 (2588): VM Completion File Detected.
2025-05-06 23:31:22 (2588): Powering off VM.
2025-05-06 23:31:23 (2588): Successfully stopped VM.
2025-05-06 23:31:23 (2588): Deregistering VM. (boinc_c31078c034261ae0, slot#0)
2025-05-06 23:31:23 (2588): Removing network bandwidth throttle group from VM.
2025-05-06 23:31:24 (2588): Removing VM from VirtualBox.
23:31:29 (2588): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN