Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:33 (1740209): wrapper (7.7.26015): starting
23:45:33 (1740209): wrapper: running run_atlas (--nthreads 12)
[2025-05-06 23:45:33] Arguments: --nthreads 12
[2025-05-06 23:45:33] Threads: 12
[2025-05-06 23:45:33] Checking for CVMFS
[2025-05-06 23:45:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-06 23:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-06 23:45:34] Running cvmfs_config stat atlas.cern.ch
[2025-05-06 23:45:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-06 23:45:34] 2.12.6.0 2644471 108340 374220 145698 0 345 31456840 32935937 6650 130560 0 196741284 99.505 259171321 27348 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-06 23:45:34] CVMFS is ok
[2025-05-06 23:45:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-06 23:45:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-06 23:45:34] Further information can be found at the LHC@home message board.
[2025-05-06 23:45:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-06 23:45:34] Checking for apptainer binary...
[2025-05-06 23:45:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-06 23:45:34] Running /usr/bin/apptainer --version
[2025-05-06 23:45:34] apptainer version 1.4.0-1.el9
[2025-05-06 23:45:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-06 23:45:34] c6-4-5-2.aglt2.org
[2025-05-06 23:45:34] apptainer works
[2025-05-06 23:45:34] Set ATHENA_PROC_NUMBER=12
[2025-05-06 23:45:34] Set ATHENA_CORE_NUMBER=12
[2025-05-06 23:45:34] Starting ATLAS job with PandaID=6635391589
[2025-05-06 23:45:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-07 00:48:07]  *** The last 200 lines of the pilot log: ***
[2025-05-07 00:48:07]  lfn=log.44506063._028104.job.log.tgz.1
[2025-05-07 00:48:07]  mtime=0
[2025-05-07 00:48:07]  protocol_id=None
[2025-05-07 00:48:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-07 00:48:07]  replicas=None
[2025-05-07 00:48:07]  scope=mc23_13p6TeV
[2025-05-07 00:48:07]  status=None
[2025-05-07 00:48:07]  status_code=0
[2025-05-07 00:48:07]  storage_token=
[2025-05-07 00:48:07]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6635391589/log.44506063._028104.job.log.tgz.1
[2025-05-07 00:48:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/0f/log.44506063._028104.job.log.tgz.1
[2025-05-07 00:48:07]  workdir=None
[2025-05-07 00:48:07] ]
[2025-05-07 00:48:07] 2025-05-07 04:47:38,788 | INFO     | transferring file log.44506063._028104.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6635391589/log.44506063._028104.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-07 00:48:07] 2025-05-07 04:47:38,789 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6635391589/log.44506063._028104.job.log.tgz.1 /tmp/boinchome/slots/1/log.44506063._028104.job
[2025-05-07 00:48:07] 2025-05-07 04:47:38,839 | INFO     | adding to output.list: log.44506063._028104.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/0f/log.44506063._028104.job.log.tg
[2025-05-07 00:48:07] 2025-05-07 04:47:38,840 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-07 00:48:07] 2025-05-07 04:47:38,840 | INFO     | summary of transferred files:
[2025-05-07 00:48:07] 2025-05-07 04:47:38,840 | INFO     |  -- lfn=log.44506063._028104.job.log.tgz.1, status_code=0, status=transferred
[2025-05-07 00:48:07] 2025-05-07 04:47:38,840 | INFO     | stage-out finished correctly
[2025-05-07 00:48:07] 2025-05-07 04:47:39,145 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-07 00:48:07] 2025-05-07 04:47:39,834 | WARNING  | process 1751169 can no longer be monitored (due to stat problems) - aborting
[2025-05-07 00:48:07] 2025-05-07 04:47:39,835 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6635391589/memory_monitor_summary.json (trf name=prmon)
[2025-05-07 00:48:07] 2025-05-07 04:47:40,104 | INFO     | number of running child processes to parent process 1751169: 1
[2025-05-07 00:48:07] 2025-05-07 04:47:40,105 | INFO     | maximum number of monitored processes: 6
[2025-05-07 00:48:07] 2025-05-07 04:47:41,943 | INFO     | job 6635391589 has state=finished
[2025-05-07 00:48:07] 2025-05-07 04:47:41,943 | INFO     | preparing for final server update for job 6635391589 in state='finished'
[2025-05-07 00:48:07] 2025-05-07 04:47:41,943 | INFO     | this job has now completed (state=finished)
[2025-05-07 00:48:07] 2025-05-07 04:47:41,943 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-07 00:48:07] 2025-05-07 04:47:41,943 | INFO     | log transfer has been attempted: DONE
[2025-05-07 00:48:07] 2025-05-07 04:47:41,944 | INFO     | job 6635391589 has finished - writing final server update
[2025-05-07 00:48:07] 2025-05-07 04:47:41,944 | INFO     | total number of processed events: 400 (read)
[2025-05-07 00:48:07] 2025-05-07 04:47:41,955 | INFO     | executing command: lscpu
[2025-05-07 00:48:07] 2025-05-07 04:47:42,029 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-07 00:48:07] 2025-05-07 04:47:42,610 | INFO     | monitor loop #275: job 0:6635391589 is in state 'finished'
[2025-05-07 00:48:07] 2025-05-07 04:47:42,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-07 00:48:07] 2025-05-07 04:47:45,115 | INFO     | monitor loop #276: job 0:6635391589 is in state 'finished'
[2025-05-07 00:48:07] 2025-05-07 04:47:45,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-07 00:48:07] 2025-05-07 04:47:46,672 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-07 00:48:07] 2025-05-07 04:47:46,672 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6635391589/memory_monitor_summary.json (trf name=prmon)
[2025-05-07 00:48:07] 2025-05-07 04:47:46,673 | INFO     | extracted standard info from prmon json
[2025-05-07 00:48:07] 2025-05-07 04:47:46,673 | INFO     | extracted standard memory fields from prmon json
[2025-05-07 00:48:07] 2025-05-07 04:47:46,673 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-07 00:48:07] 2025-05-07 04:47:46,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-07 00:48:07] 2025-05-07 04:47:46,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-07 00:48:07] 2025-05-07 04:47:46,675 | INFO     | fitting pss+swap vs Time
[2025-05-07 00:48:07] 2025-05-07 04:47:46,675 | INFO     | sum of square deviations: 48810217.5
[2025-05-07 00:48:07] 2025-05-07 04:47:46,681 | INFO     | sum of deviations: 11822774566.499998
[2025-05-07 00:48:07] 2025-05-07 04:47:46,682 | INFO     | mean x: 1746591487.5
[2025-05-07 00:48:07] 2025-05-07 04:47:46,682 | INFO     | mean y: 2201851.425925926
[2025-05-07 00:48:07] 2025-05-07 04:47:46,682 | INFO     | -- intersect: -423055888731.35834
[2025-05-07 00:48:07] 2025-05-07 04:47:46,682 | INFO     | intersect: -423055888731.35834
[2025-05-07 00:48:07] 2025-05-07 04:47:46,682 | INFO     | chi2: 1.4834876159408081
[2025-05-07 00:48:07] 2025-05-07 04:47:46,682 | INFO     | -- intersect: -423055888731.35834
[2025-05-07 00:48:07] 2025-05-07 04:47:46,682 | INFO     | current memory leak: 242.22 B/s (using 54 data points, chi2=1.48)
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | ..............................
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . Timing measurements:
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . get job = 0 s
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . initial setup = 2 s
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . payload setup = 4 s
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . stage-in = 0 s
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . payload execution = 3691 s
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . stage-out = 1 s
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | . log creation = 0 s
[2025-05-07 00:48:07] 2025-05-07 04:47:46,683 | INFO     | ..............................
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | 
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | job summary report
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | --------------------------------------------------
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | PanDA job id: 6635391589
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | task id: 44506063
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | errors: (none)
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | pilot state: finished 
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | transexitcode: 0
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | exeerrorcode: 0
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | exeerrordiag: 
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | exitcode: 0
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | exitmsg: OK
[2025-05-07 00:48:07] 2025-05-07 04:47:47,102 | INFO     | cpuconsumptiontime: 31008 s
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | nevents: 400
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | neventsw: 0
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | pid: 1751169
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | pgrp: 1751169
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | corecount: 12
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | event service: False
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | sizes: {0: 2393515, 1: 2393714, 4: 2393920, 11: 2393948, 3700: 2419665, 3702: 2428790, 3710: 2428904}
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | --------------------------------------------------
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | 
[2025-05-07 00:48:07] 2025-05-07 04:47:47,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-07 00:48:07] 2025-05-07 04:47:47,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,163 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-07 00:48:07] 2025-05-07 04:47:47,164 | INFO     | job 6635391589 has completed (purged errors)
[2025-05-07 00:48:07] 2025-05-07 04:47:47,164 | INFO     | overall cleanup function is called
[2025-05-07 00:48:07] 2025-05-07 04:47:47,799 | INFO     | PID=1744783 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-07 00:48:07] 2025-05-07 04:47:47,799 | INFO     | .. there are 12 such processes running
[2025-05-07 00:48:07] 2025-05-07 04:47:48,173 | INFO     | --- collectZombieJob: --- 10, [1751169]
[2025-05-07 00:48:07] 2025-05-07 04:47:48,173 | INFO     | zombie collector waiting for pid 1751169
[2025-05-07 00:48:07] 2025-05-07 04:47:48,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-07 00:48:07] 2025-05-07 04:47:48,173 | INFO     | collected zombie processes
[2025-05-07 00:48:07] 2025-05-07 04:47:48,173 | INFO     | will attempt to kill all subprocesses of pid=1751169
[2025-05-07 00:48:07] 2025-05-07 04:47:48,571 | INFO     | process IDs to be killed: [1751169] (in reverse order)
[2025-05-07 00:48:07] 2025-05-07 04:47:48,652 | WARNING  | found no corresponding commands to process id(s)
[2025-05-07 00:48:07] 2025-05-07 04:47:48,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-07 00:48:07] 2025-05-07 04:47:48,663 | INFO     | did not find any defunct processes belonging to 1751169
[2025-05-07 00:48:07] 2025-05-07 04:47:48,673 | INFO     | did not find any defunct processes belonging to 1751169
[2025-05-07 00:48:07] 2025-05-07 04:47:48,673 | INFO     | ready for new job
[2025-05-07 00:48:07] 2025-05-07 04:47:48,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-07 00:48:07] 2025-05-07 04:47:48,675 | INFO     | **************************************
[2025-05-07 00:48:07] 2025-05-07 04:47:48,675 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-07 00:48:07] 2025-05-07 04:47:48,675 | INFO     | **************************************
[2025-05-07 00:48:07] 2025-05-07 04:47:48,675 | INFO     | 
[2025-05-07 00:48:07] 2025-05-07 04:47:48,681 | INFO     | architecture information:
[2025-05-07 00:48:07] 2025-05-07 04:47:48,681 | INFO     | executing command: cat /etc/os-release
[2025-05-07 00:48:07] 2025-05-07 04:47:48,699 | INFO     | cat /etc/os-release:
[2025-05-07 00:48:07] NAME="CentOS Linux"
[2025-05-07 00:48:07] VERSION="7 (Core)"
[2025-05-07 00:48:07] ID="centos"
[2025-05-07 00:48:07] ID_LIKE="rhel fedora"
[2025-05-07 00:48:07] VERSION_ID="7"
[2025-05-07 00:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-07 00:48:07] ANSI_COLOR="0;31"
[2025-05-07 00:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-07 00:48:07] HOME_URL="https://www.centos.org/"
[2025-05-07 00:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-07 00:48:07] 
[2025-05-07 00:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-07 00:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-07 00:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-07 00:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-07 00:48:07] 
[2025-05-07 00:48:07] 2025-05-07 04:47:48,699 | INFO     | **************************************
[2025-05-07 00:48:07] 2025-05-07 04:47:49,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-07 00:48:07] 2025-05-07 04:47:49,221 | INFO     | sufficient remaining disk space (72686239744 B)
[2025-05-07 00:48:07] 2025-05-07 04:47:49,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-07 00:48:07] 2025-05-07 04:47:49,221 | INFO     | current server update state: UPDATING_FINAL
[2025-05-07 00:48:07] 2025-05-07 04:47:49,221 | INFO     | update_server=False
[2025-05-07 00:48:07] 2025-05-07 04:47:49,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-07 00:48:07] 2025-05-07 04:47:49,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-07 00:48:07] 2025-05-07 04:47:49,222 | INFO     | aborting loop
[2025-05-07 00:48:07] 2025-05-07 04:47:49,470 | INFO     | all payload control threads have been joined
[2025-05-07 00:48:07] 2025-05-07 04:47:49,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-07 00:48:07] 2025-05-07 04:47:49,806 | INFO     | found 0 job(s) in 20 queues
[2025-05-07 00:48:07] 2025-05-07 04:47:49,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-07 00:48:07] 2025-05-07 04:47:49,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-07 00:48:07] 2025-05-07 04:47:49,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-07 00:48:07] 2025-05-07 04:47:50,227 | INFO     | [job] retrieve thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:50,232 | INFO     | [job] job monitor thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:50,320 | INFO     | all data control threads have been joined
[2025-05-07 00:48:07] 2025-05-07 04:47:50,477 | INFO     | [payload] control thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:50,522 | INFO     | all job control threads have been joined
[2025-05-07 00:48:07] 2025-05-07 04:47:50,566 | INFO     | [data] copytool_in thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,073 | INFO     | [payload] failed_post thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,326 | INFO     | [data] control thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,341 | INFO     | [job] validate thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,401 | INFO     | [payload] validate_pre thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,517 | INFO     | [payload] validate_post thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,529 | INFO     | [job] control thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,534 | INFO     | [data] copytool_out thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,597 | INFO     | [payload] execute_payloads thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,673 | INFO     | [job] create_data_payload thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:51,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-07 00:48:07] 2025-05-07 04:47:52,849 | INFO     | [job] queue monitor thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:53,829 | INFO     | [data] queue_monitor thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:47:59,956 | INFO     | job.realtimelogging is not enabled
[2025-05-07 00:48:07] 2025-05-07 04:48:00,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-07 00:48:07] 2025-05-07 04:48:01,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540416837440)>', '<ExcThread(monitor, started 140539785639680)>']
[2025-05-07 00:48:07] 2025-05-07 04:48:01,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-07 00:48:07] 2025-05-07 04:48:01,877 | INFO     | [monitor] control thread has ended
[2025-05-07 00:48:07] 2025-05-07 04:48:06,650 | INFO     | all workflow threads have been joined
[2025-05-07 00:48:07] 2025-05-07 04:48:06,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-07 00:48:07] 2025-05-07 04:48:06,650 | INFO     | traces error code: 0
[2025-05-07 00:48:07] 2025-05-07 04:48:06,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-07 00:48:07] 2025-05-07 04:48:06,915 [wrapper] ==== pilot stdout END ====
[2025-05-07 00:48:07] 2025-05-07 04:48:06,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-07 00:48:07] 2025-05-07 04:48:06,919 [wrapper] pilotpid: 1744783
[2025-05-07 00:48:07] 2025-05-07 04:48:06,921 [wrapper] Pilot exit status: 0
[2025-05-07 00:48:07] 2025-05-07 04:48:06,930 [wrapper] pandaids: 6635391589
[2025-05-07 00:48:07] 2025-05-07 04:48:06,976 [wrapper] cleanup supervisor_pilot 2051223 1744784
[2025-05-07 00:48:07] 2025-05-07 04:48:06,983 [wrapper] Test setup, not cleaning
[2025-05-07 00:48:07] 2025-05-07 04:48:06,985 [wrapper] apfmon messages muted
[2025-05-07 00:48:07] 2025-05-07 04:48:06,986 [wrapper] ==== wrapper stdout END ====
[2025-05-07 00:48:07] 2025-05-07 04:48:06,988 [wrapper] ==== wrapper stderr END ====
[2025-05-07 00:48:07]  *** Error codes and diagnostics ***
[2025-05-07 00:48:07]     "exeErrorCode": 0,
[2025-05-07 00:48:07]     "exeErrorDiag": "",
[2025-05-07 00:48:07]     "pilotErrorCode": 0,
[2025-05-07 00:48:07]     "pilotErrorDiag": "",
[2025-05-07 00:48:07]  *** Listing of results directory ***
[2025-05-07 00:48:07] total 413160
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas    495897 May  6 15:56 pilot3.tar.gz
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas      5111 May  6 16:17 queuedata.json
[2025-05-07 00:48:07] -rwx------. 1 boincer umatlas     37140 May  6 16:21 runpilot2-wrapper.sh
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas       100 May  6 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-07 00:48:07] -rwxr-xr-x. 1 boincer umatlas      7986 May  6 23:45 run_atlas
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas       105 May  6 23:45 job.xml
[2025-05-07 00:48:07] -rw-r--r--. 2 boincer umatlas 223887429 May  6 23:45 EVNT.44506061._001118.pool.root.1
[2025-05-07 00:48:07] -rw-r--r--. 2 boincer umatlas     17569 May  6 23:45 start_atlas.sh
[2025-05-07 00:48:07] drwxrwx--x. 2 boincer umatlas      4096 May  6 23:45 shared
[2025-05-07 00:48:07] -rw-r--r--. 2 boincer umatlas    508879 May  6 23:45 input.tar.gz
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas         0 May  6 23:45 boinc_lockfile
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas      2556 May  6 23:45 pandaJob.out
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas       467 May  6 23:45 setup.sh.local
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas    998332 May  6 23:45 agis_schedconf.cvmfs.json
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas   1596741 May  6 23:45 agis_ddmendpoints.agis.ALL.json
[2025-05-07 00:48:07] drwx------. 4 boincer umatlas      4096 May  6 23:45 pilot3
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas      6856 May  7 00:39 init_data.xml
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas       529 May  7 00:47 boinc_task_state.xml
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas 193884355 May  7 00:47 HITS.44506063._028104.pool.root.1
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas      1036 May  7 00:47 memory_monitor_summary.json
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas    343110 May  7 00:47 log.44506063._028104.job.log.tgz.1
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas        95 May  7 00:47 pilot_heartbeat.json
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas      7712 May  7 00:47 heartbeat.json
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas        27 May  7 00:48 wrapper_checkpoint.txt
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas      4425 May  7 00:48 pilotlog.txt
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas      8192 May  7 00:48 boinc_mmap_file
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas    381636 May  7 00:48 log.44506063._028104.job.log.1
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas       357 May  7 00:48 output.list
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas       620 May  7 00:48 runtime_log
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas    747520 May  7 00:48 result.tar.gz
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas       652 May  7 00:48 VQvMDmEydW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmFOHLDmLtDVdn.diag
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas     11420 May  7 00:48 runtime_log.err
[2025-05-07 00:48:07] -rw-r--r--. 1 boincer umatlas     21658 May  7 00:48 stderr.txt
[2025-05-07 00:48:07] HITS file was successfully produced:
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas 193884355 May  7 00:47 shared/HITS.pool.root.1
[2025-05-07 00:48:07]  *** Contents of shared directory: ***
[2025-05-07 00:48:07] total 409244
[2025-05-07 00:48:07] -rw-r--r--. 2 boincer umatlas 223887429 May  6 23:45 ATLAS.root_0
[2025-05-07 00:48:07] -rw-r--r--. 2 boincer umatlas     17569 May  6 23:45 start_atlas.sh
[2025-05-07 00:48:07] -rw-r--r--. 2 boincer umatlas    508879 May  6 23:45 input.tar.gz
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas 193884355 May  7 00:47 HITS.pool.root.1
[2025-05-07 00:48:07] -rw-------. 1 boincer umatlas    747520 May  7 00:48 result.tar.gz
00:48:08 (1740209): run_atlas exited; CPU time 31077.213539
00:48:08 (1740209): called boinc_finish(0)

</stderr_txt>
]]>

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