Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-07 04:15:14 (43940): Detected: vboxwrapper 26206
2025-05-07 04:15:14 (43940): Detected: BOINC client v8.0.2
2025-05-07 04:15:15 (43940): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-07 04:15:15 (43940): Successfully copied 'init_data.xml' to the shared directory.
2025-05-07 04:15:16 (43940): Create VM. (boinc_afb1ce8e4c7709e4, slot#0)
2025-05-07 04:15:16 (43940): Setting Memory Size for VM. (4800MB)
2025-05-07 04:15:16 (43940): Setting CPU Count for VM. (8)
2025-05-07 04:15:17 (43940): Setting Chipset Options for VM.
2025-05-07 04:15:17 (43940): Setting Graphics Controller Options for VM.
2025-05-07 04:15:17 (43940): Setting Boot Options for VM.
2025-05-07 04:15:17 (43940): Setting Network Configuration for NAT.
2025-05-07 04:15:18 (43940): Enabling VM Network Access.
2025-05-07 04:15:18 (43940): Disabling USB Support for VM.
2025-05-07 04:15:18 (43940): Disabling COM Port Support for VM.
2025-05-07 04:15:18 (43940): Disabling LPT Port Support for VM.
2025-05-07 04:15:19 (43940): Disabling Audio Support for VM.
2025-05-07 04:15:19 (43940): Disabling Clipboard Support for VM.
2025-05-07 04:15:19 (43940): Disabling Drag and Drop Support for VM.
2025-05-07 04:15:19 (43940): Adding storage controller(s) to VM.
2025-05-07 04:15:20 (43940): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-07 04:15:23 (43940): Adding VirtualBox Guest Additions to VM.
2025-05-07 04:15:23 (43940): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-07 04:15:23 (43940): forwarding host port 54425 to guest port 80
2025-05-07 04:15:23 (43940): Enabling remote desktop for VM.
2025-05-07 04:15:24 (43940): Required extension pack not installed, remote desktop not enabled.
2025-05-07 04:15:24 (43940): Enabling shared directory for VM.
2025-05-07 04:15:24 (43940): Starting VM using VBoxManage interface. (boinc_afb1ce8e4c7709e4, slot#0)
2025-05-07 04:15:31 (43940): Successfully started VM. (PID = '38088')
2025-05-07 04:15:31 (43940): Reporting VM Process ID to BOINC.
2025-05-07 04:15:31 (43940): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-07 04:15:31 (43940): Guest Log: CPUID EDX: 0x178bfbff
2025-05-07 04:15:31 (43940): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-07 04:15:31 (43940): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-07 04:15:31 (43940): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-07 04:15:31 (43940): Detected: Web Application Enabled (http://localhost:54425)
2025-05-07 04:15:31 (43940): Preference change detected
2025-05-07 04:15:31 (43940): Setting CPU throttle for VM. (90%)
2025-05-07 04:15:32 (43940): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-07 04:15:33 (43940): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-07 04:15:33 (43940): Guest Log: BIOS: Booting from Hard Disk...
2025-05-07 04:15:36 (43940): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-07 04:15:36 (43940): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-07 04:15:36 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-07 04:15:36 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-07 04:15:36 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-07 04:15:36 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-07 04:15:36 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-07 04:15:36 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-07 04:15:37 (43940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-07 04:15:46 (43940): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-07 04:15:46 (43940): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-07 04:15:56 (43940): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.000230 main     Log opened 2025-05-07T04:15:53.608775000Z
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.000353 main     OS Product: Linux
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.000379 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.000400 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.000422 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.000423 main     Process ID: 1376
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.000424 main     Package type: LINUX_64BITS_GENERIC
2025-05-07 04:15:56 (43940): Guest Log: 00:00:00.001215 main     5.2.32 r132073 started. Verbose level = 0
2025-05-07 04:15:56 (43940): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-07 04:15:56 (43940): Guest Log: [INFO] Mounting shared directory
2025-05-07 04:15:56 (43940): Guest Log: [INFO] Checking for init_data.xml
2025-05-07 04:16:02 (43940): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-07 04:16:02 (43940): Guest Log: [INFO] Detected branch: prod
2025-05-07 04:16:02 (43940): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-07 04:16:02 (43940): Guest Log: Copying input files
2025-05-07 04:16:04 (43940): Guest Log: Copied input files into RunAtlas.
2025-05-07 04:16:04 (43940): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-07 04:16:04 (43940): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-07 04:16:04 (43940): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-07 04:16:04 (43940): Guest Log: Further information can be found at the LHC@home message board.
2025-05-07 04:16:06 (43940): Guest Log: 00:00:10.005538 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 552 883 000ns (GuestNow=1 746 584 165 059 564 000 ns GuestLast=1 746 591 353 612 447 000 ns fSetTimeLastLoop=true )
2025-05-07 04:16:14 (43940): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-07 04:16:14 (43940): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-07 04:16:14 (43940): Guest Log: 2.6.3.0 1653 0 32196 145696 4 1 3117346 4096000 0 65024 0 0 n/a 1 1 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-07 04:16:15 (43940): Guest Log: copied the webapp to /var/www
2025-05-07 04:16:15 (43940): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-07 04:16:15 (43940): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-07 04:16:16 (43940): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-07 04:16:16 (43940): Guest Log:  *** Starting ATLAS job. (PandaID=6635391602 taskID=44506063) ***
2025-05-07 04:39:53 (43940): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 04:40:13 (43940): VM state change detected. (old = 'paused', new = 'running')
2025-05-07 05:56:04 (43940): Status Report: Elapsed Time: '6000.000000'
2025-05-07 05:56:04 (43940): Status Report: CPU Time: '35354.171875'
2025-05-07 06:45:02 (43940): Guest Log:  *** Job finished ***
2025-05-07 06:45:02 (43940): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:37,771 | INFO     | [payload] execute_payloads thread has finished
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:38,285 | INFO     | [data] copytool_out thread has finished
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:40,825 | INFO     | [data] queue_monitor thread has finished
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:42,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912068032320)>', '<ExcThread(monitor, started 139911621494528)>']
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:42,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:42,380 | INFO     | [monitor] control thread has ended
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,083 | INFO     | all workflow threads have been joined
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,084 | INFO     | end of generic workflow (traces error code: 0)
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,084 | INFO     | traces error code: 0
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,178 [wrapper] ==== pilot stdout END ====
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,183 [wrapper] ==== wrapper stdout RESUME ====
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,189 [wrapper] pilotpid: 6019
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,196 [wrapper] Pilot exit status: 0
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,252 [wrapper] pandaids: 6635391602
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,291 [wrapper] cleanup supervisor_pilot  4064 6020
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,300 [wrapper] Test setup, not cleaning
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,306 [wrapper] apfmon messages muted
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,312 [wrapper] ==== wrapper stdout END ====
2025-05-07 06:45:02 (43940): Guest Log: 2025-05-07 04:44:47,318 [wrapper] ==== wrapper stderr END ====
2025-05-07 06:45:02 (43940): Guest Log:  *** Error codes and diagnostics ***
2025-05-07 06:45:02 (43940): Guest Log:     "exeErrorCode": 0,
2025-05-07 06:45:02 (43940): Guest Log:     "exeErrorDiag": "",
2025-05-07 06:45:02 (43940): Guest Log:     "pilotErrorCode": 0,
2025-05-07 06:45:02 (43940): Guest Log:     "pilotErrorDiag": "",
2025-05-07 06:45:02 (43940): Guest Log:  *** Listing of results directory ***
2025-05-07 06:45:02 (43940): Guest Log: total 198208
2025-05-07 06:45:02 (43940): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  6 19:56 pilot3.tar.gz
2025-05-07 06:45:02 (43940): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  6 20:10 queuedata.json
2025-05-07 06:45:02 (43940): Guest Log: -rwx------. 1 atlas atlas     37140 May  6 20:11 runpilot2-wrapper.sh
2025-05-07 06:45:02 (43940): Guest Log: -rwxr-xr-x. 1 atlas atlas     12243 May  7 02:16 init_data.xml
2025-05-07 06:45:02 (43940): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 May  7 02:16 input.tar.gz
2025-05-07 06:45:02 (43940): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  7 02:16 start_atlas.sh
2025-05-07 06:45:02 (43940): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  7 02:16 EVNT.44506061._001118.pool.root.1 -> /data/./ATLAS.root_0
2025-05-07 06:45:02 (43940): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May  7 02:16 pandaJob.out
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas       424 May  7 02:16 setup.sh.local
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas    998332 May  7 02:17 agis_schedconf.cvmfs.json
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas   1596741 May  7 02:17 agis_ddmendpoints.agis.ALL.json
2025-05-07 06:45:02 (43940): Guest Log: drwx------. 4 atlas atlas      4096 May  7 02:17 pilot3
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas 197069238 May  7 04:43 HITS.44506063._028117.pool.root.1
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas        95 May  7 04:44 pilot_heartbeat.json
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas      1028 May  7 04:44 memory_monitor_summary.json
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas    337680 May  7 04:44 log.44506063._028117.job.log.tgz.1
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas      7684 May  7 04:44 heartbeat.json
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas      4536 May  7 04:44 pilotlog.txt
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas    721493 May  7 04:44 log.44506063._028117.job.log.1
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas       357 May  7 04:44 output.list
2025-05-07 06:45:02 (43940): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  7 04:44 runtime_log
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas   1075200 May  7 04:44 result.tar.gz
2025-05-07 06:45:02 (43940): Guest Log: -rw-r--r--. 1 atlas atlas     10958 May  7 04:44 runtime_log.err
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas       664 May  7 04:44 3E5NDmNodW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmhx4LDmVQgz4n.diag
2025-05-07 06:45:02 (43940): Guest Log: Looking for outputfile HITS.44506063._028117.pool.root.1
2025-05-07 06:45:02 (43940): Guest Log: HITS file was successfully produced
2025-05-07 06:45:02 (43940): Guest Log: -rw-------. 1 atlas atlas 197069238 May  7 04:43 /home/atlas/RunAtlas/HITS.44506063._028117.pool.root.1
2025-05-07 06:45:03 (43940): Guest Log: Successfully finished the ATLAS job!
2025-05-07 06:45:03 (43940): Guest Log: Copying the results back to the shared directory!
2025-05-07 06:45:03 (43940): Guest Log:  *** Contents of shared directory: ***
2025-05-07 06:45:03 (43940): Guest Log: total 412680
2025-05-07 06:45:03 (43940): Guest Log: -rwxrwxrwx. 1 root root 223887429 May  7 02:15 ATLAS.root_0
2025-05-07 06:45:03 (43940): Guest Log: -rwxrwxrwx. 1 root root 197069238 May  7  2025 HITS.pool.root.1
2025-05-07 06:45:03 (43940): Guest Log: -rwxrwxrwx. 1 root root     12243 May  7 02:15 init_data.xml
2025-05-07 06:45:03 (43940): Guest Log: -rwxrwxrwx. 1 root root    508880 May  7 02:15 input.tar.gz
2025-05-07 06:45:03 (43940): Guest Log: -rwxrwxrwx. 1 root root   1075200 May  7  2025 result.tar.gz
2025-05-07 06:45:03 (43940): Guest Log: -rwxrwxrwx. 1 root root     17569 May  7 02:15 start_atlas.sh
2025-05-07 06:45:03 (43940): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-07 06:45:03 (43940): VM Completion File Detected.
2025-05-07 06:45:03 (43940): Powering off VM.
2025-05-07 06:45:04 (43940): Successfully stopped VM.
2025-05-07 06:45:04 (43940): Deregistering VM. (boinc_afb1ce8e4c7709e4, slot#0)
2025-05-07 06:45:04 (43940): Removing network bandwidth throttle group from VM.
2025-05-07 06:45:04 (43940): Removing VM from VirtualBox.
06:45:10 (43940): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN