Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-07 06:57:11 (12464): Detected: vboxwrapper 26206
2025-05-07 06:57:11 (12464): Detected: BOINC client v8.0.2
2025-05-07 06:57:12 (12464): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2025-05-07 06:57:13 (12464): Successfully copied 'init_data.xml' to the shared directory.
2025-05-07 06:57:13 (12464): Create VM. (boinc_2fe777b7acd41f9f, slot#7)
2025-05-07 06:57:14 (12464): Setting Memory Size for VM. (8000MB)
2025-05-07 06:57:14 (12464): Setting CPU Count for VM. (5)
2025-05-07 06:57:14 (12464): Setting Chipset Options for VM.
2025-05-07 06:57:14 (12464): Setting Graphics Controller Options for VM.
2025-05-07 06:57:15 (12464): Setting Boot Options for VM.
2025-05-07 06:57:15 (12464): Setting Network Configuration for NAT.
2025-05-07 06:57:15 (12464): Enabling VM Network Access.
2025-05-07 06:57:15 (12464): Disabling USB Support for VM.
2025-05-07 06:57:16 (12464): Disabling COM Port Support for VM.
2025-05-07 06:57:16 (12464): Disabling LPT Port Support for VM.
2025-05-07 06:57:16 (12464): Disabling Audio Support for VM.
2025-05-07 06:57:17 (12464): Disabling Clipboard Support for VM.
2025-05-07 06:57:17 (12464): Disabling Drag and Drop Support for VM.
2025-05-07 06:57:17 (12464): Adding storage controller(s) to VM.
2025-05-07 06:57:17 (12464): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-07 06:57:20 (12464): Adding VirtualBox Guest Additions to VM.
2025-05-07 06:57:20 (12464): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-07 06:57:21 (12464): forwarding host port 58010 to guest port 80
2025-05-07 06:57:21 (12464): Enabling remote desktop for VM.
2025-05-07 06:57:22 (12464): Enabling shared directory for VM.
2025-05-07 06:57:22 (12464): Starting VM using VBoxManage interface. (boinc_2fe777b7acd41f9f, slot#7)
2025-05-07 06:57:28 (12464): Successfully started VM. (PID = '15664')
2025-05-07 06:57:28 (12464): Reporting VM Process ID to BOINC.
2025-05-07 06:57:28 (12464): Guest Log: BIOS: VirtualBox 7.0.8
2025-05-07 06:57:28 (12464): Guest Log: CPUID EDX: 0x178bfbff
2025-05-07 06:57:28 (12464): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-07 06:57:28 (12464): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-07 06:57:28 (12464): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-07 06:57:28 (12464): Detected: Web Application Enabled (http://localhost:58010)
2025-05-07 06:57:28 (12464): Detected: Remote Desktop Enabled (localhost:58011)
2025-05-07 06:57:28 (12464): Preference change detected
2025-05-07 06:57:28 (12464): Setting CPU throttle for VM. (100%)
2025-05-07 06:57:28 (12464): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-07 06:57:30 (12464): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-07 06:57:30 (12464): Guest Log: BIOS: Booting from Hard Disk...
2025-05-07 06:57:33 (12464): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-07 06:57:33 (12464): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-07 06:57:33 (12464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-07 06:57:41 (12464): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-07 06:57:41 (12464): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-07 06:58:09 (12464): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.000124 main     Log opened 2025-05-07T06:58:07.667689000Z
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.000192 main     OS Product: Linux
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.000209 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.000221 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.000237 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.000238 main     Process ID: 1447
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.000238 main     Package type: LINUX_64BITS_GENERIC
2025-05-07 06:58:09 (12464): Guest Log: 00:00:00.001705 main     5.2.32 r132073 started. Verbose level = 0
2025-05-07 06:58:10 (12464): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-07 06:58:10 (12464): Guest Log: [INFO] Mounting shared directory
2025-05-07 06:58:10 (12464): Guest Log: [INFO] Checking for init_data.xml
2025-05-07 06:58:16 (12464): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-07 06:58:16 (12464): Guest Log: [INFO] Detected branch: prod
2025-05-07 06:58:17 (12464): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-07 06:58:17 (12464): Guest Log: Copying input files
2025-05-07 06:58:17 (12464): Guest Log: Copied input files into RunAtlas.
2025-05-07 06:58:17 (12464): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-07 06:58:17 (12464): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-07 06:58:17 (12464): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-07 06:58:17 (12464): Guest Log: Further information can be found at the LHC@home message board.
2025-05-07 06:58:19 (12464): Guest Log: 00:00:10.003852 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 361 393 000ns (GuestNow=1 746 626 299 031 386 000 ns GuestLast=1 746 601 087 669 993 000 ns fSetTimeLastLoop=true )
2025-05-07 06:58:28 (12464): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-07 06:58:28 (12464): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-07 06:58:28 (12464): Guest Log: 2.6.3.0 1730 0 30136 145713 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-07 06:58:30 (12464): Guest Log: copied the webapp to /var/www
2025-05-07 06:58:30 (12464): Guest Log: ATHENA_PROC_NUMBER=5
2025-05-07 06:58:30 (12464): Guest Log: ATHENA_CORE_NUMBER=5
2025-05-07 06:58:31 (12464): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-07 06:58:31 (12464): Guest Log:  *** Starting ATLAS job. (PandaID=6635391302 taskID=44506063) ***
2025-05-07 08:13:40 (12464): Guest Log:  *** Job finished ***
2025-05-07 08:13:40 (12464): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:29,130 | INFO     | [payload] run_realtimelog thread has finished
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:29,248 | INFO     | [data] copytool_out thread has finished
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:31,282 | INFO     | [data] queue_monitor thread has finished
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:32,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669753689920)>', '<ExcThread(monitor, started 140669104420608)>']
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:33,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:33,651 | INFO     | [monitor] control thread has ended
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:37,996 | INFO     | all workflow threads have been joined
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:37,996 | INFO     | end of generic workflow (traces error code: 0)
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:37,996 | INFO     | traces error code: 0
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:37,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,044 [wrapper] ==== pilot stdout END ====
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,047 [wrapper] ==== wrapper stdout RESUME ====
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,049 [wrapper] pilotpid: 6056
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,053 [wrapper] Pilot exit status: 0
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,129 [wrapper] pandaids: 6635391302
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,147 [wrapper] cleanup supervisor_pilot  2697 6057
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,149 [wrapper] Test setup, not cleaning
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,152 [wrapper] apfmon messages muted
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,155 [wrapper] ==== wrapper stdout END ====
2025-05-07 08:13:40 (12464): Guest Log: 2025-05-07 15:13:38,157 [wrapper] ==== wrapper stderr END ====
2025-05-07 08:13:40 (12464): Guest Log:  *** Error codes and diagnostics ***
2025-05-07 08:13:40 (12464): Guest Log:     "exeErrorCode": 0,
2025-05-07 08:13:40 (12464): Guest Log:     "exeErrorDiag": "",
2025-05-07 08:13:40 (12464): Guest Log:     "pilotErrorCode": 0,
2025-05-07 08:13:40 (12464): Guest Log:     "pilotErrorDiag": "",
2025-05-07 08:13:40 (12464): Guest Log:  *** Listing of results directory ***
2025-05-07 08:13:40 (12464): Guest Log: total 189676
2025-05-07 08:13:40 (12464): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  6 19:45 pilot3.tar.gz
2025-05-07 08:13:40 (12464): Guest Log: -rwx------. 1 atlas atlas     37140 May  6 19:54 runpilot2-wrapper.sh
2025-05-07 08:13:40 (12464): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  6 19:54 queuedata.json
2025-05-07 08:13:40 (12464): Guest Log: -rwxr-xr-x. 1 atlas atlas      9413 May  7 13:58 init_data.xml
2025-05-07 08:13:40 (12464): Guest Log: -rwxr-xr-x. 1 atlas atlas    508872 May  7 13:58 input.tar.gz
2025-05-07 08:13:40 (12464): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  7 13:58 start_atlas.sh
2025-05-07 08:13:40 (12464): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  7 13:58 EVNT.44506061._001108.pool.root.1 -> /data/./ATLAS.root_0
2025-05-07 08:13:40 (12464): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May  7 13:58 pandaJob.out
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas       424 May  7 13:58 setup.sh.local
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas    997499 May  7 13:59 agis_schedconf.cvmfs.json
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas   1596741 May  7 13:59 agis_ddmendpoints.agis.ALL.json
2025-05-07 08:13:40 (12464): Guest Log: drwx------. 4 atlas atlas      4096 May  7 13:59 pilot3
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas 189157160 May  7 15:12 HITS.44506063._027861.pool.root.1
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas        95 May  7 15:12 pilot_heartbeat.json
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas      1036 May  7 15:13 memory_monitor_summary.json
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas    246102 May  7 15:13 log.44506063._027861.job.log.tgz.1
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas      7746 May  7 15:13 heartbeat.json
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas      4536 May  7 15:13 pilotlog.txt
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas    401213 May  7 15:13 log.44506063._027861.job.log.1
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas       357 May  7 15:13 output.list
2025-05-07 08:13:40 (12464): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  7 15:13 runtime_log
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas    665600 May  7 15:13 result.tar.gz
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas       653 May  7 15:13 zlPLDmeYdW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmPJHLDm58gKgm.diag
2025-05-07 08:13:40 (12464): Guest Log: -rw-r--r--. 1 atlas atlas     10944 May  7 15:13 runtime_log.err
2025-05-07 08:13:40 (12464): Guest Log: Looking for outputfile HITS.44506063._027861.pool.root.1
2025-05-07 08:13:40 (12464): Guest Log: HITS file was successfully produced
2025-05-07 08:13:40 (12464): Guest Log: -rw-------. 1 atlas atlas 189157160 May  7 15:12 /home/atlas/RunAtlas/HITS.44506063._027861.pool.root.1
2025-05-07 08:13:40 (12464): Guest Log: Successfully finished the ATLAS job!
2025-05-07 08:13:40 (12464): Guest Log: Copying the results back to the shared directory!
2025-05-07 08:13:41 (12464): Guest Log:  *** Contents of shared directory: ***
2025-05-07 08:13:41 (12464): Guest Log: total 402096
2025-05-07 08:13:41 (12464): Guest Log: -rwxrwxrwx. 1 root root 221374539 May  7 13:57 ATLAS.root_0
2025-05-07 08:13:41 (12464): Guest Log: -rwxrwxrwx. 1 root root 189157160 May  7 15:13 HITS.pool.root.1
2025-05-07 08:13:41 (12464): Guest Log: -rwxrwxrwx. 1 root root      9413 May  7 13:57 init_data.xml
2025-05-07 08:13:41 (12464): Guest Log: -rwxrwxrwx. 1 root root    508872 May  7 01:50 input.tar.gz
2025-05-07 08:13:41 (12464): Guest Log: -rwxrwxrwx. 1 root root    665600 May  7 15:13 result.tar.gz
2025-05-07 08:13:41 (12464): Guest Log: -rwxrwxrwx. 1 root root     17569 May  7 01:50 start_atlas.sh
2025-05-07 08:13:41 (12464): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-07 08:13:41 (12464): VM Completion File Detected.
2025-05-07 08:13:41 (12464): Powering off VM.
2025-05-07 08:13:41 (12464): Successfully stopped VM.
2025-05-07 08:13:41 (12464): Deregistering VM. (boinc_2fe777b7acd41f9f, slot#7)
2025-05-07 08:13:41 (12464): Removing network bandwidth throttle group from VM.
2025-05-07 08:13:42 (12464): Removing VM from VirtualBox.
08:13:47 (12464): called boinc_finish(0)

</stderr_txt>
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