Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-07 03:09:42 (5300): Detected: vboxwrapper 26206
2025-05-07 03:09:42 (5300): Detected: BOINC client v8.0.2
2025-05-07 03:09:42 (5300): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-07 03:09:42 (5300): Successfully copied 'init_data.xml' to the shared directory.
2025-05-07 03:09:43 (5300): Create VM. (boinc_8863347624ccdd28, slot#3)
2025-05-07 03:09:43 (5300): Setting Memory Size for VM. (4300MB)
2025-05-07 03:09:44 (5300): Setting CPU Count for VM. (3)
2025-05-07 03:09:44 (5300): Setting Chipset Options for VM.
2025-05-07 03:09:44 (5300): Setting Graphics Controller Options for VM.
2025-05-07 03:09:44 (5300): Setting Boot Options for VM.
2025-05-07 03:09:45 (5300): Setting Network Configuration for NAT.
2025-05-07 03:09:45 (5300): Enabling VM Network Access.
2025-05-07 03:09:45 (5300): Disabling USB Support for VM.
2025-05-07 03:09:46 (5300): Disabling COM Port Support for VM.
2025-05-07 03:09:46 (5300): Disabling LPT Port Support for VM.
2025-05-07 03:09:46 (5300): Disabling Audio Support for VM.
2025-05-07 03:09:46 (5300): Disabling Clipboard Support for VM.
2025-05-07 03:09:47 (5300): Disabling Drag and Drop Support for VM.
2025-05-07 03:09:47 (5300): Adding storage controller(s) to VM.
2025-05-07 03:09:47 (5300): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-07 03:09:48 (5300): Adding VirtualBox Guest Additions to VM.
2025-05-07 03:09:48 (5300): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-07 03:09:48 (5300): forwarding host port 57271 to guest port 80
2025-05-07 03:09:48 (5300): Enabling remote desktop for VM.
2025-05-07 03:09:49 (5300): Required extension pack not installed, remote desktop not enabled.
2025-05-07 03:09:49 (5300): Enabling shared directory for VM.
2025-05-07 03:09:49 (5300): Starting VM using VBoxManage interface. (boinc_8863347624ccdd28, slot#3)
2025-05-07 03:09:58 (5300): Successfully started VM. (PID = '4720')
2025-05-07 03:09:58 (5300): Reporting VM Process ID to BOINC.
2025-05-07 03:09:58 (5300): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-07 03:09:58 (5300): Guest Log: CPUID EDX: 0x178bfbff
2025-05-07 03:09:58 (5300): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-07 03:09:58 (5300): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-07 03:09:58 (5300): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-07 03:09:58 (5300): Detected: Web Application Enabled (http://localhost:57271)
2025-05-07 03:09:58 (5300): Preference change detected
2025-05-07 03:09:58 (5300): Setting CPU throttle for VM. (50%)
2025-05-07 03:09:58 (5300): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-07 03:10:00 (5300): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-07 03:10:00 (5300): Guest Log: BIOS: Booting from Hard Disk...
2025-05-07 03:10:04 (5300): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-07 03:10:04 (5300): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-07 03:10:04 (5300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-07 03:10:13 (5300): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-07 03:10:13 (5300): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-07 03:10:25 (5300): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.000203 main     Log opened 2025-05-07T03:10:23.741365000Z
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.000389 main     OS Product: Linux
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.000438 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.000479 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.000522 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.000523 main     Process ID: 1249
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.000524 main     Package type: LINUX_64BITS_GENERIC
2025-05-07 03:10:25 (5300): Guest Log: 00:00:00.001847 main     5.2.32 r132073 started. Verbose level = 0
2025-05-07 03:10:25 (5300): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-07 03:10:25 (5300): Guest Log: [INFO] Mounting shared directory
2025-05-07 03:10:26 (5300): Guest Log: [INFO] Checking for init_data.xml
2025-05-07 03:10:31 (5300): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-07 03:10:31 (5300): Guest Log: [INFO] Detected branch: prod
2025-05-07 03:10:32 (5300): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-07 03:10:32 (5300): Guest Log: Copying input files
2025-05-07 03:10:35 (5300): Guest Log: Copied input files into RunAtlas.
2025-05-07 03:10:35 (5300): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-07 03:10:35 (5300): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-07 03:10:35 (5300): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-07 03:10:35 (5300): Guest Log: Further information can be found at the LHC@home message board.
2025-05-07 03:10:35 (5300): Guest Log: 00:00:10.005668 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 585 255 000ns (GuestNow=1 746 580 234 161 260 000 ns GuestLast=1 746 587 423 746 515 000 ns fSetTimeLastLoop=true )
2025-05-07 03:10:45 (5300): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-07 03:10:45 (5300): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-07 03:10:45 (5300): Guest Log: 2.6.3.0 1525 0 32076 145693 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-07 03:10:48 (5300): Guest Log: copied the webapp to /var/www
2025-05-07 03:10:49 (5300): Guest Log: ATHENA_PROC_NUMBER=3
2025-05-07 03:10:49 (5300): Guest Log: ATHENA_CORE_NUMBER=3
2025-05-07 03:10:52 (5300): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-07 03:10:53 (5300): Guest Log:  *** Starting ATLAS job. (PandaID=6635271825 taskID=44506063) ***
2025-05-07 03:20:31 (5300): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 03:20:51 (5300): VM state change detected. (old = 'paused', new = 'running')
2025-05-07 03:25:26 (5300): Guest Log:  *** Job finished ***
2025-05-07 03:25:26 (5300): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:24:55,560 | INFO     | [data] copytool_out thread has finished
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:24:56,561 | INFO     | [job] queue monitor thread has finished
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:24:58,286 | INFO     | [data] queue_monitor thread has finished
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:24:58,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616795735872)>', '<ExcThread(monitor, started 140616222635776)>']
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:24:58,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:24:58,649 | INFO     | [monitor] control thread has ended
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,416 | INFO     | all workflow threads have been joined
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,416 | INFO     | end of generic workflow (traces error code: 0)
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,417 | INFO     | traces error code: 0
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,747 [wrapper] ==== pilot stdout END ====
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,760 [wrapper] ==== wrapper stdout RESUME ====
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,771 [wrapper] pilotpid: 5851
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:03,782 [wrapper] Pilot exit status: 0
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:04,228 [wrapper] pandaids: 6635271825
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:04,298 [wrapper] cleanup supervisor_pilot  5857 5852
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:04,309 [wrapper] Test setup, not cleaning
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:04,320 [wrapper] apfmon messages muted
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:04,330 [wrapper] ==== wrapper stdout END ====
2025-05-07 03:25:26 (5300): Guest Log: 2025-05-07 01:25:04,341 [wrapper] ==== wrapper stderr END ====
2025-05-07 03:25:26 (5300): Guest Log:  *** Error codes and diagnostics ***
2025-05-07 03:25:26 (5300): Guest Log:     "exeErrorCode": 65,
2025-05-07 03:25:26 (5300): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-05-07 03:25:26 (5300): Guest Log:     "pilotErrorCode": 1305,
2025-05-07 03:25:26 (5300): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-05-07 03:25:26 (5300): Guest Log:  *** Listing of results directory ***
2025-05-07 03:25:26 (5300): Guest Log: total 4188
2025-05-07 03:25:26 (5300): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May  6 19:30 pilot3.tar.gz
2025-05-07 03:25:26 (5300): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May  6 19:30 queuedata.json
2025-05-07 03:25:26 (5300): Guest Log: -rwx------. 1 atlas atlas   37140 May  6 19:31 runpilot2-wrapper.sh
2025-05-07 03:25:26 (5300): Guest Log: -rwxr-xr-x. 1 atlas atlas    8838 May  7 01:10 init_data.xml
2025-05-07 03:25:26 (5300): Guest Log: -rwxr-xr-x. 1 atlas atlas  508878 May  7 01:10 input.tar.gz
2025-05-07 03:25:26 (5300): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 May  7 01:10 start_atlas.sh
2025-05-07 03:25:26 (5300): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May  7 01:10 EVNT.44506061._001059.pool.root.1 -> /data/./ATLAS.root_0
2025-05-07 03:25:26 (5300): Guest Log: -rw-r--r--. 1 atlas atlas    2557 May  7 01:10 pandaJob.out
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas     424 May  7 01:11 setup.sh.local
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas  998332 May  7 01:13 agis_schedconf.cvmfs.json
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas 1596741 May  7 01:13 agis_ddmendpoints.agis.ALL.json
2025-05-07 03:25:26 (5300): Guest Log: drwx------. 4 atlas atlas    4096 May  7 01:13 pilot3
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas   52035 May  7 01:22 log.44506063._026598.job.log.tgz.1
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas      95 May  7 01:24 pilot_heartbeat.json
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas    8121 May  7 01:24 heartbeat.json
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas    4722 May  7 01:25 pilotlog.txt
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas  208677 May  7 01:25 log.44506063._026598.job.log.1
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas     188 May  7 01:25 output.list
2025-05-07 03:25:26 (5300): Guest Log: -rw-r--r--. 1 atlas atlas     620 May  7 01:25 runtime_log
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas  276480 May  7 01:25 result.tar.gz
2025-05-07 03:25:26 (5300): Guest Log: -rw-------. 1 atlas atlas     641 May  7 01:25 xG2LDmxBdW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5k4LDmJFczFo.diag
2025-05-07 03:25:26 (5300): Guest Log: -rw-r--r--. 1 atlas atlas   10779 May  7 01:25 runtime_log.err
2025-05-07 03:25:26 (5300): Guest Log: Looking for outputfile HITS.44506063._026598.pool.root.1
2025-05-07 03:25:26 (5300): Guest Log: No HITS file was produced
2025-05-07 03:25:26 (5300): Guest Log: Successfully finished the ATLAS job!
2025-05-07 03:25:26 (5300): Guest Log: Copying the results back to the shared directory!
2025-05-07 03:25:26 (5300): Guest Log:  *** Contents of shared directory: ***
2025-05-07 03:25:26 (5300): Guest Log: total 222012
2025-05-07 03:25:26 (5300): Guest Log: -rwxrwxrwx. 1 root root 226515349 May  7 01:09 ATLAS.root_0
2025-05-07 03:25:26 (5300): Guest Log: -rwxrwxrwx. 1 root root      8838 May  7 01:09 init_data.xml
2025-05-07 03:25:26 (5300): Guest Log: -rwxrwxrwx. 1 root root    508878 May  7 00:12 input.tar.gz
2025-05-07 03:25:26 (5300): Guest Log: -rwxrwxrwx. 1 root root    276480 May  7  2025 result.tar.gz
2025-05-07 03:25:26 (5300): Guest Log: -rwxrwxrwx. 1 root root     17569 May  7 00:12 start_atlas.sh
2025-05-07 03:25:26 (5300): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-07 03:25:26 (5300): VM Completion File Detected.
2025-05-07 03:25:26 (5300): Powering off VM.
2025-05-07 03:25:27 (5300): Successfully stopped VM.
2025-05-07 03:25:27 (5300): Deregistering VM. (boinc_8863347624ccdd28, slot#3)
2025-05-07 03:25:27 (5300): Removing network bandwidth throttle group from VM.
2025-05-07 03:25:27 (5300): Removing VM from VirtualBox.
03:25:33 (5300): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN