Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-07 01:44:06 (79776): Detected: vboxwrapper 26206
2025-05-07 01:44:06 (79776): Detected: BOINC client v8.0.2
2025-05-07 01:44:07 (79776): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-07 01:44:08 (79776): Successfully copied 'init_data.xml' to the shared directory.
2025-05-07 01:44:08 (79776): Create VM. (boinc_86ac3d85b2a938ae, slot#16)
2025-05-07 01:44:09 (79776): Setting Memory Size for VM. (4800MB)
2025-05-07 01:44:09 (79776): Setting CPU Count for VM. (8)
2025-05-07 01:44:09 (79776): Setting Chipset Options for VM.
2025-05-07 01:44:10 (79776): Setting Graphics Controller Options for VM.
2025-05-07 01:44:10 (79776): Setting Boot Options for VM.
2025-05-07 01:44:10 (79776): Setting Network Configuration for NAT.
2025-05-07 01:44:10 (79776): Enabling VM Network Access.
2025-05-07 01:44:11 (79776): Disabling USB Support for VM.
2025-05-07 01:44:11 (79776): Disabling COM Port Support for VM.
2025-05-07 01:44:11 (79776): Disabling LPT Port Support for VM.
2025-05-07 01:44:12 (79776): Disabling Audio Support for VM.
2025-05-07 01:44:12 (79776): Disabling Clipboard Support for VM.
2025-05-07 01:44:12 (79776): Disabling Drag and Drop Support for VM.
2025-05-07 01:44:12 (79776): Adding storage controller(s) to VM.
2025-05-07 01:44:13 (79776): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-07 01:44:15 (79776): Adding VirtualBox Guest Additions to VM.
2025-05-07 01:44:16 (79776): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-07 01:44:16 (79776): forwarding host port 63512 to guest port 80
2025-05-07 01:44:16 (79776): Enabling remote desktop for VM.
2025-05-07 01:44:16 (79776): Required extension pack not installed, remote desktop not enabled.
2025-05-07 01:44:16 (79776): Enabling shared directory for VM.
2025-05-07 01:44:17 (79776): Starting VM using VBoxManage interface. (boinc_86ac3d85b2a938ae, slot#16)
2025-05-07 01:44:22 (79776): Successfully started VM. (PID = '75992')
2025-05-07 01:44:22 (79776): Reporting VM Process ID to BOINC.
2025-05-07 01:44:22 (79776): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-07 01:44:22 (79776): Guest Log: CPUID EDX: 0x178bfbff
2025-05-07 01:44:22 (79776): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-07 01:44:22 (79776): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-07 01:44:22 (79776): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-07 01:44:22 (79776): Detected: Web Application Enabled (http://localhost:63512)
2025-05-07 01:44:23 (79776): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 01:44:36 (79776): Preference change detected
2025-05-07 01:44:36 (79776): Setting CPU throttle for VM. (90%)
2025-05-07 01:44:36 (79776): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-07 01:44:36 (79776): VM state change detected. (old = 'paused', new = 'running')
2025-05-07 01:44:37 (79776): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-07 01:44:37 (79776): Guest Log: BIOS: Booting from Hard Disk...
2025-05-07 01:44:40 (79776): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-07 01:44:40 (79776): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-07 01:44:40 (79776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-07 01:44:47 (79776): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-07 01:44:47 (79776): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-07 01:44:56 (79776): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.000522 main     Log opened 2025-05-07T01:44:40.919131000Z
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.000795 main     OS Product: Linux
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.000968 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.001017 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.001040 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.001041 main     Process ID: 1375
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.001041 main     Package type: LINUX_64BITS_GENERIC
2025-05-07 01:44:56 (79776): Guest Log: 00:00:00.002123 main     5.2.32 r132073 started. Verbose level = 0
2025-05-07 01:44:56 (79776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-07 01:44:56 (79776): Guest Log: [INFO] Mounting shared directory
2025-05-07 01:44:56 (79776): Guest Log: [INFO] Checking for init_data.xml
2025-05-07 01:45:02 (79776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-07 01:45:02 (79776): Guest Log: [INFO] Detected branch: prod
2025-05-07 01:45:03 (79776): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-07 01:45:03 (79776): Guest Log: Copying input files
2025-05-07 01:45:05 (79776): Guest Log: Copied input files into RunAtlas.
2025-05-07 01:45:05 (79776): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-07 01:45:05 (79776): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-07 01:45:05 (79776): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-07 01:45:05 (79776): Guest Log: Further information can be found at the LHC@home message board.
2025-05-07 01:45:06 (79776): Guest Log: 00:00:10.013283 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 174 957 486 000ns (GuestNow=1 746 575 105 965 230 000 ns GuestLast=1 746 582 280 922 716 000 ns fSetTimeLastLoop=true )
2025-05-07 01:45:16 (79776): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-07 01:45:16 (79776): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-07 01:45:16 (79776): Guest Log: 2.6.3.0 1652 0 32188 145692 4 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-07 01:45:17 (79776): Guest Log: copied the webapp to /var/www
2025-05-07 01:45:17 (79776): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-07 01:45:17 (79776): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-07 01:45:18 (79776): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-07 01:45:18 (79776): Guest Log:  *** Starting ATLAS job. (PandaID=6635392757 taskID=44506063) ***
2025-05-07 01:47:56 (79776): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 01:48:16 (79776): VM state change detected. (old = 'paused', new = 'running')
2025-05-07 03:25:09 (79776): Status Report: Elapsed Time: '6000.000000'
2025-05-07 03:25:09 (79776): Status Report: CPU Time: '35141.687500'
2025-05-07 03:51:07 (79776): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 03:51:27 (79776): VM state change detected. (old = 'paused', new = 'running')
2025-05-07 03:56:28 (79776): VM state change detected. (old = 'running', new = 'paused')
2025-05-07 03:56:48 (79776): VM state change detected. (old = 'paused', new = 'running')
2025-05-07 04:13:36 (79776): Guest Log:  *** Job finished ***
2025-05-07 04:13:36 (79776): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:25,607 | INFO     | [data] queue_monitor thread has finished
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:32,531 | INFO     | job.realtimelogging is not enabled
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:33,658 | INFO     | [payload] run_realtimelog thread has finished
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:33,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656319989568)>', '<ExcThread(monitor, started 139655852828416)>']
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:34,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:34,180 | INFO     | [monitor] control thread has ended
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,770 | INFO     | all workflow threads have been joined
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,770 | INFO     | end of generic workflow (traces error code: 0)
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,770 | INFO     | traces error code: 0
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,875 [wrapper] ==== pilot stdout END ====
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,882 [wrapper] ==== wrapper stdout RESUME ====
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,892 [wrapper] pilotpid: 6028
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,899 [wrapper] Pilot exit status: 0
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:38,970 [wrapper] pandaids: 6635392757
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:39,024 [wrapper] cleanup supervisor_pilot  3976 6029
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:39,035 [wrapper] Test setup, not cleaning
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:39,043 [wrapper] apfmon messages muted
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:39,050 [wrapper] ==== wrapper stdout END ====
2025-05-07 04:13:36 (79776): Guest Log: 2025-05-07 02:12:39,058 [wrapper] ==== wrapper stderr END ====
2025-05-07 04:13:36 (79776): Guest Log:  *** Error codes and diagnostics ***
2025-05-07 04:13:36 (79776): Guest Log:     "exeErrorCode": 0,
2025-05-07 04:13:36 (79776): Guest Log:     "exeErrorDiag": "",
2025-05-07 04:13:36 (79776): Guest Log:     "pilotErrorCode": 0,
2025-05-07 04:13:36 (79776): Guest Log:     "pilotErrorDiag": "",
2025-05-07 04:13:36 (79776): Guest Log:  *** Listing of results directory ***
2025-05-07 04:13:36 (79776): Guest Log: total 198640
2025-05-07 04:13:36 (79776): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  6 21:02 pilot3.tar.gz
2025-05-07 04:13:36 (79776): Guest Log: -rwx------. 1 atlas atlas     37140 May  6 21:06 runpilot2-wrapper.sh
2025-05-07 04:13:36 (79776): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  6 21:06 queuedata.json
2025-05-07 04:13:36 (79776): Guest Log: -rwxr-xr-x. 1 atlas atlas     12245 May  6 23:45 init_data.xml
2025-05-07 04:13:36 (79776): Guest Log: -rwxr-xr-x. 1 atlas atlas    508874 May  6 23:45 input.tar.gz
2025-05-07 04:13:36 (79776): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  6 23:45 start_atlas.sh
2025-05-07 04:13:36 (79776): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  6 23:45 EVNT.44506061._001136.pool.root.1 -> /data/./ATLAS.root_0
2025-05-07 04:13:36 (79776): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May  6 23:45 pandaJob.out
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas       424 May  6 23:45 setup.sh.local
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas    998332 May  6 23:46 agis_schedconf.cvmfs.json
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas   1596741 May  6 23:46 agis_ddmendpoints.agis.ALL.json
2025-05-07 04:13:36 (79776): Guest Log: drwx------. 4 atlas atlas      4096 May  6 23:46 pilot3
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas        95 May  7 02:11 pilot_heartbeat.json
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas 197552755 May  7 02:11 HITS.44506063._028559.pool.root.1
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas      1028 May  7 02:12 memory_monitor_summary.json
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas    328253 May  7 02:12 log.44506063._028559.job.log.tgz.1
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas      7680 May  7 02:12 heartbeat.json
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas      4801 May  7 02:12 pilotlog.txt
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas    711235 May  7 02:12 log.44506063._028559.job.log.1
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas       357 May  7 02:12 output.list
2025-05-07 04:13:36 (79776): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  7 02:12 runtime_log
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas   1054720 May  7 02:12 result.tar.gz
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas       664 May  7 02:12 ZvYMDmgfeW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm8QHLDmlzWyzm.diag
2025-05-07 04:13:36 (79776): Guest Log: -rw-r--r--. 1 atlas atlas     10958 May  7 02:12 runtime_log.err
2025-05-07 04:13:36 (79776): Guest Log: Looking for outputfile HITS.44506063._028559.pool.root.1
2025-05-07 04:13:36 (79776): Guest Log: HITS file was successfully produced
2025-05-07 04:13:36 (79776): Guest Log: -rw-------. 1 atlas atlas 197552755 May  7 02:11 /home/atlas/RunAtlas/HITS.44506063._028559.pool.root.1
2025-05-07 04:13:37 (79776): Guest Log: Successfully finished the ATLAS job!
2025-05-07 04:13:37 (79776): Guest Log: Copying the results back to the shared directory!
2025-05-07 04:13:37 (79776): Guest Log:  *** Contents of shared directory: ***
2025-05-07 04:13:37 (79776): Guest Log: total 417532
2025-05-07 04:13:37 (79776): Guest Log: -rwxrwxrwx. 1 root root 228394388 May  6 23:44 ATLAS.root_0
2025-05-07 04:13:37 (79776): Guest Log: -rwxrwxrwx. 1 root root 197552755 May  7  2025 HITS.pool.root.1
2025-05-07 04:13:37 (79776): Guest Log: -rwxrwxrwx. 1 root root     12245 May  6 23:44 init_data.xml
2025-05-07 04:13:37 (79776): Guest Log: -rwxrwxrwx. 1 root root    508874 May  6 23:40 input.tar.gz
2025-05-07 04:13:37 (79776): Guest Log: -rwxrwxrwx. 1 root root   1054720 May  7  2025 result.tar.gz
2025-05-07 04:13:37 (79776): Guest Log: -rwxrwxrwx. 1 root root     17569 May  6 23:40 start_atlas.sh
2025-05-07 04:13:37 (79776): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-07 04:13:37 (79776): VM Completion File Detected.
2025-05-07 04:13:37 (79776): Powering off VM.
2025-05-07 04:13:38 (79776): Successfully stopped VM.
2025-05-07 04:13:38 (79776): Deregistering VM. (boinc_86ac3d85b2a938ae, slot#16)
2025-05-07 04:13:38 (79776): Removing network bandwidth throttle group from VM.
2025-05-07 04:13:39 (79776): Removing VM from VirtualBox.
04:13:44 (79776): called boinc_finish(0)

</stderr_txt>
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