Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-06 16:50:38 (43592): Detected: vboxwrapper 26206
2025-05-06 16:50:38 (43592): Detected: BOINC client v8.0.2
2025-05-06 16:50:39 (43592): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-06 16:50:39 (43592): Successfully copied 'init_data.xml' to the shared directory.
2025-05-06 16:50:40 (43592): Create VM. (boinc_d323372059a0c1a3, slot#6)
2025-05-06 16:50:40 (43592): Setting Memory Size for VM. (4800MB)
2025-05-06 16:50:40 (43592): Setting CPU Count for VM. (8)
2025-05-06 16:50:41 (43592): Setting Chipset Options for VM.
2025-05-06 16:50:41 (43592): Setting Graphics Controller Options for VM.
2025-05-06 16:50:41 (43592): Setting Boot Options for VM.
2025-05-06 16:50:41 (43592): Setting Network Configuration for NAT.
2025-05-06 16:50:42 (43592): Enabling VM Network Access.
2025-05-06 16:50:42 (43592): Disabling USB Support for VM.
2025-05-06 16:50:42 (43592): Disabling COM Port Support for VM.
2025-05-06 16:50:42 (43592): Disabling LPT Port Support for VM.
2025-05-06 16:50:43 (43592): Disabling Audio Support for VM.
2025-05-06 16:50:43 (43592): Disabling Clipboard Support for VM.
2025-05-06 16:50:43 (43592): Disabling Drag and Drop Support for VM.
2025-05-06 16:50:43 (43592): Adding storage controller(s) to VM.
2025-05-06 16:50:44 (43592): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-06 16:50:44 (43592): Adding VirtualBox Guest Additions to VM.
2025-05-06 16:50:45 (43592): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-06 16:50:45 (43592): forwarding host port 55768 to guest port 80
2025-05-06 16:50:45 (43592): Enabling remote desktop for VM.
2025-05-06 16:50:45 (43592): Required extension pack not installed, remote desktop not enabled.
2025-05-06 16:50:45 (43592): Enabling shared directory for VM.
2025-05-06 16:50:46 (43592): Starting VM using VBoxManage interface. (boinc_d323372059a0c1a3, slot#6)
2025-05-06 16:50:52 (43592): Successfully started VM. (PID = '69740')
2025-05-06 16:50:52 (43592): Reporting VM Process ID to BOINC.
2025-05-06 16:50:52 (43592): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-06 16:50:52 (43592): Guest Log: CPUID EDX: 0x178bfbff
2025-05-06 16:50:52 (43592): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-06 16:50:52 (43592): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-06 16:50:52 (43592): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-06 16:50:52 (43592): Detected: Web Application Enabled (http://localhost:55768)
2025-05-06 16:50:52 (43592): Preference change detected
2025-05-06 16:50:52 (43592): Setting CPU throttle for VM. (100%)
2025-05-06 16:50:52 (43592): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-06 16:50:54 (43592): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-06 16:50:54 (43592): Guest Log: BIOS: Booting from Hard Disk...
2025-05-06 16:50:57 (43592): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-06 16:50:57 (43592): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-06 16:50:57 (43592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-06 16:51:03 (43592): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-06 16:51:03 (43592): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-06 16:51:10 (43592): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.000131 main     Log opened 2025-05-06T16:51:07.854669000Z
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.000240 main     OS Product: Linux
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.000310 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.000337 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.000362 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.000362 main     Process ID: 1368
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.000362 main     Package type: LINUX_64BITS_GENERIC
2025-05-06 16:51:10 (43592): Guest Log: 00:00:00.001412 main     5.2.32 r132073 started. Verbose level = 0
2025-05-06 16:51:10 (43592): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-06 16:51:10 (43592): Guest Log: [INFO] Mounting shared directory
2025-05-06 16:51:10 (43592): Guest Log: [INFO] Checking for init_data.xml
2025-05-06 16:51:13 (43592): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-06 16:51:13 (43592): Guest Log: [INFO] Detected branch: prod
2025-05-06 16:51:13 (43592): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-06 16:51:13 (43592): Guest Log: Copying input files
2025-05-06 16:51:15 (43592): Guest Log: Copied input files into RunAtlas.
2025-05-06 16:51:15 (43592): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-06 16:51:15 (43592): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-06 16:51:15 (43592): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-06 16:51:15 (43592): Guest Log: Further information can be found at the LHC@home message board.
2025-05-06 16:51:20 (43592): Guest Log: 00:00:10.008614 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 536 082 000ns (GuestNow=1 746 564 679 393 088 000 ns GuestLast=1 746 550 267 857 006 000 ns fSetTimeLastLoop=true )
2025-05-06 16:51:22 (43592): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-06 16:51:22 (43592): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-06 16:51:22 (43592): Guest Log: 2.6.3.0 1645 0 29992 145687 3 1 3117346 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-06 16:51:23 (43592): Guest Log: copied the webapp to /var/www
2025-05-06 16:51:23 (43592): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-06 16:51:23 (43592): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-06 16:51:24 (43592): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-06 16:51:24 (43592): Guest Log:  *** Starting ATLAS job. (PandaID=6635057390 taskID=44506063) ***
2025-05-06 18:17:30 (43592): Guest Log:  *** Job finished ***
2025-05-06 18:17:30 (43592): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:17,385 | INFO     | [data] queue_monitor thread has finished
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:22,325 | INFO     | job.realtimelogging is not enabled
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:23,361 | INFO     | [payload] run_realtimelog thread has finished
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:24,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140151170905920)>', '<ExcThread(monitor, started 140150269007616)>']
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:24,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:24,268 | INFO     | [monitor] control thread has ended
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,217 | INFO     | all workflow threads have been joined
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,218 | INFO     | end of generic workflow (traces error code: 0)
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,218 | INFO     | traces error code: 0
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,294 [wrapper] ==== pilot stdout END ====
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,299 [wrapper] ==== wrapper stdout RESUME ====
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,303 [wrapper] pilotpid: 5988
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,307 [wrapper] Pilot exit status: 0
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,400 [wrapper] pandaids: 6635057390
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,431 [wrapper] cleanup supervisor_pilot  1911 5989
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,435 [wrapper] Test setup, not cleaning
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,440 [wrapper] apfmon messages muted
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,444 [wrapper] ==== wrapper stdout END ====
2025-05-06 18:17:30 (43592): Guest Log: 2025-05-06 22:17:29,448 [wrapper] ==== wrapper stderr END ====
2025-05-06 18:17:30 (43592): Guest Log:  *** Error codes and diagnostics ***
2025-05-06 18:17:30 (43592): Guest Log:     "exeErrorCode": 0,
2025-05-06 18:17:30 (43592): Guest Log:     "exeErrorDiag": "",
2025-05-06 18:17:30 (43592): Guest Log:     "pilotErrorCode": 0,
2025-05-06 18:17:30 (43592): Guest Log:     "pilotErrorDiag": "",
2025-05-06 18:17:30 (43592): Guest Log:  *** Listing of results directory ***
2025-05-06 18:17:30 (43592): Guest Log: total 202648
2025-05-06 18:17:30 (43592): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  6 14:37 pilot3.tar.gz
2025-05-06 18:17:30 (43592): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  6 14:49 queuedata.json
2025-05-06 18:17:30 (43592): Guest Log: -rwx------. 1 atlas atlas     37140 May  6 14:50 runpilot2-wrapper.sh
2025-05-06 18:17:30 (43592): Guest Log: -rwxr-xr-x. 1 atlas atlas      9112 May  6 20:51 init_data.xml
2025-05-06 18:17:30 (43592): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 May  6 20:51 input.tar.gz
2025-05-06 18:17:30 (43592): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  6 20:51 start_atlas.sh
2025-05-06 18:17:30 (43592): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  6 20:51 EVNT.44506061._001015.pool.root.1 -> /data/./ATLAS.root_0
2025-05-06 18:17:30 (43592): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May  6 20:51 pandaJob.out
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas       424 May  6 20:51 setup.sh.local
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas    998316 May  6 20:52 agis_schedconf.cvmfs.json
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas   1596741 May  6 20:52 agis_ddmendpoints.agis.ALL.json
2025-05-06 18:17:30 (43592): Guest Log: drwx------. 4 atlas atlas      4096 May  6 20:52 pilot3
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas 202216648 May  6 22:15 HITS.44506063._025469.pool.root.1
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas      1038 May  6 22:16 memory_monitor_summary.json
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas    313187 May  6 22:16 log.44506063._025469.job.log.tgz.1
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas        95 May  6 22:16 pilot_heartbeat.json
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas      7746 May  6 22:17 heartbeat.json
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas      4608 May  6 22:17 pilotlog.txt
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas    446178 May  6 22:17 log.44506063._025469.job.log.1
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas       357 May  6 22:17 output.list
2025-05-06 18:17:30 (43592): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  6 22:17 runtime_log
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas    778240 May  6 22:17 result.tar.gz
2025-05-06 18:17:30 (43592): Guest Log: -rw-r--r--. 1 atlas atlas     11004 May  6 22:17 runtime_log.err
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas       670 May  6 22:17 g29NDm2nYW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPY4LDmcuC4vm.diag
2025-05-06 18:17:30 (43592): Guest Log: Looking for outputfile HITS.44506063._025469.pool.root.1
2025-05-06 18:17:30 (43592): Guest Log: HITS file was successfully produced
2025-05-06 18:17:30 (43592): Guest Log: -rw-------. 1 atlas atlas 202216648 May  6 22:15 /home/atlas/RunAtlas/HITS.44506063._025469.pool.root.1
2025-05-06 18:17:31 (43592): Guest Log: Successfully finished the ATLAS job!
2025-05-06 18:17:31 (43592): Guest Log: Copying the results back to the shared directory!
2025-05-06 18:17:31 (43592): Guest Log:  *** Contents of shared directory: ***
2025-05-06 18:17:31 (43592): Guest Log: total 420108
2025-05-06 18:17:31 (43592): Guest Log: -rwxrwxrwx. 1 root root 226645778 May  6 20:50 ATLAS.root_0
2025-05-06 18:17:31 (43592): Guest Log: -rwxrwxrwx. 1 root root 202216648 May  6 22:17 HITS.pool.root.1
2025-05-06 18:17:31 (43592): Guest Log: -rwxrwxrwx. 1 root root      9112 May  6 20:50 init_data.xml
2025-05-06 18:17:31 (43592): Guest Log: -rwxrwxrwx. 1 root root    508881 May  6 18:20 input.tar.gz
2025-05-06 18:17:31 (43592): Guest Log: -rwxrwxrwx. 1 root root    778240 May  6 22:17 result.tar.gz
2025-05-06 18:17:31 (43592): Guest Log: -rwxrwxrwx. 1 root root     17569 May  6 18:20 start_atlas.sh
2025-05-06 18:17:31 (43592): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-06 18:17:31 (43592): VM Completion File Detected.
2025-05-06 18:17:31 (43592): Powering off VM.
2025-05-06 18:17:32 (43592): Successfully stopped VM.
2025-05-06 18:17:32 (43592): Deregistering VM. (boinc_d323372059a0c1a3, slot#6)
2025-05-06 18:17:32 (43592): Removing network bandwidth throttle group from VM.
2025-05-06 18:17:32 (43592): Removing VM from VirtualBox.
18:17:37 (43592): called boinc_finish(0)

</stderr_txt>
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