Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:16:03 (28605): wrapper (7.7.26015): starting
01:16:03 (28605): wrapper: running run_atlas (--nthreads 8)
[2025-05-07 01:16:03] Arguments: --nthreads 8
[2025-05-07 01:16:03] Threads: 8
[2025-05-07 01:16:03] Checking for CVMFS
[2025-05-07 01:16:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-07 01:16:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-07 01:16:04] Running cvmfs_config stat atlas.cern.ch
[2025-05-07 01:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-07 01:16:04] 2.11.2.0 19354 2403 74572 145691 0 99 15992904 25165825 1006 130560 0 1253443 99.511 1794295 4610 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-07 01:16:04] CVMFS is ok
[2025-05-07 01:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-07 01:16:04] Checking for apptainer binary...
[2025-05-07 01:16:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-07 01:16:04] Running /usr/bin/apptainer --version
[2025-05-07 01:16:04] apptainer version 1.3.2-1.el7
[2025-05-07 01:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-07 01:16:05] cg-vwn484.simple-grid.lan
[2025-05-07 01:16:05] apptainer works
[2025-05-07 01:16:05] Set ATHENA_PROC_NUMBER=8
[2025-05-07 01:16:05] Set ATHENA_CORE_NUMBER=8
[2025-05-07 01:16:05] Starting ATLAS job with PandaID=6634961283
[2025-05-07 01:16:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-07 06:16:09]  *** The last 200 lines of the pilot log: ***
[2025-05-07 06:16:09] 2025-05-07 03:43:56,346 | INFO     | -- intersect: -15249807847.131458
[2025-05-07 06:16:09] 2025-05-07 03:43:56,346 | INFO     | intersect: -15249807847.131458
[2025-05-07 06:16:09] 2025-05-07 03:43:56,347 | INFO     | chi2: 5.447174102826436
[2025-05-07 06:16:09] 2025-05-07 03:43:56,347 | INFO     | sum of square deviations: 5202255680.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,350 | INFO     | sum of deviations: 64747094885.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,350 | INFO     | mean x: 1746581198.5
[2025-05-07 06:16:09] 2025-05-07 03:43:56,350 | INFO     | mean y: 2481550.0234375
[2025-05-07 06:16:09] 2025-05-07 03:43:56,350 | INFO     | -- intersect: -21735407846.37711
[2025-05-07 06:16:09] 2025-05-07 03:43:56,350 | INFO     | intersect: -21735407846.37711
[2025-05-07 06:16:09] 2025-05-07 03:43:56,351 | INFO     | chi2: 4.709370864090303
[2025-05-07 06:16:09] 2025-05-07 03:43:56,351 | INFO     | current chi2=4.709370864090303 (change=13.544697210124063 %)
[2025-05-07 06:16:09] 2025-05-07 03:43:56,351 | INFO     | right removable region: 255
[2025-05-07 06:16:09] 2025-05-07 03:43:56,352 | INFO     | sum of square deviations: 5202255680.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,354 | INFO     | sum of deviations: -18584006941.5
[2025-05-07 06:16:09] 2025-05-07 03:43:56,354 | INFO     | mean x: 1746581503.5
[2025-05-07 06:16:09] 2025-05-07 03:43:56,354 | INFO     | mean y: 2506191.52734375
[2025-05-07 06:16:09] 2025-05-07 03:43:56,354 | INFO     | -- intersect: 6241815595.278047
[2025-05-07 06:16:09] 2025-05-07 03:43:56,355 | INFO     | intersect: 6241815595.278047
[2025-05-07 06:16:09] 2025-05-07 03:43:56,355 | INFO     | chi2: 2.725473876628136
[2025-05-07 06:16:09] 2025-05-07 03:43:56,355 | INFO     | current chi2=2.725473876628136 (change=49.96536139327842 %)
[2025-05-07 06:16:09] 2025-05-07 03:43:56,356 | INFO     | sum of square deviations: 4903347750.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,358 | INFO     | sum of deviations: -66862942837.00001
[2025-05-07 06:16:09] 2025-05-07 03:43:56,358 | INFO     | mean x: 1746581656.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,358 | INFO     | mean y: 2530823.378486056
[2025-05-07 06:16:09] 2025-05-07 03:43:56,358 | INFO     | -- intersect: 23819236343.65916
[2025-05-07 06:16:09] 2025-05-07 03:43:56,359 | INFO     | intersect: 23819236343.65916
[2025-05-07 06:16:09] 2025-05-07 03:43:56,359 | INFO     | chi2: 1.3690862569977964
[2025-05-07 06:16:09] 2025-05-07 03:43:56,359 | INFO     | current chi2=1.3690862569977964 (change=49.76703799151495 %)
[2025-05-07 06:16:09] 2025-05-07 03:43:56,360 | INFO     | sum of square deviations: 4616114457.5
[2025-05-07 06:16:09] 2025-05-07 03:43:56,362 | INFO     | sum of deviations: -84636760588.5
[2025-05-07 06:16:09] 2025-05-07 03:43:56,362 | INFO     | mean x: 1746581808.5
[2025-05-07 06:16:09] 2025-05-07 03:43:56,362 | INFO     | mean y: 2540175.613821138
[2025-05-07 06:16:09] 2025-05-07 03:43:56,362 | INFO     | -- intersect: 32026231904.935257
[2025-05-07 06:16:09] 2025-05-07 03:43:56,363 | INFO     | intersect: 32026231904.935257
[2025-05-07 06:16:09] 2025-05-07 03:43:56,363 | INFO     | chi2: 1.01271683603344
[2025-05-07 06:16:09] 2025-05-07 03:43:56,363 | INFO     | current chi2=1.01271683603344 (change=26.029727428995002 %)
[2025-05-07 06:16:09] 2025-05-07 03:43:56,364 | INFO     | sum of square deviations: 4340323240.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,366 | INFO     | sum of deviations: -78405973508.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,366 | INFO     | mean x: 1746581961.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,366 | INFO     | mean y: 2536726.597510373
[2025-05-07 06:16:09] 2025-05-07 03:43:56,366 | INFO     | -- intersect: 31553748788.793297
[2025-05-07 06:16:09] 2025-05-07 03:43:56,366 | INFO     | intersect: 31553748788.793297
[2025-05-07 06:16:09] 2025-05-07 03:43:56,367 | INFO     | chi2: 1.0110310340069186
[2025-05-07 06:16:09] 2025-05-07 03:43:56,367 | INFO     | current chi2=1.0110310340069186 (change=0.16646331595752095 %)
[2025-05-07 06:16:09] 2025-05-07 03:43:56,367 | INFO     | left removable region: 40
[2025-05-07 06:16:09] 2025-05-07 03:43:56,367 | INFO     | sum of square deviations: 3081657780.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,369 | INFO     | sum of deviations: -29753941635.000008
[2025-05-07 06:16:09] 2025-05-07 03:43:56,369 | INFO     | mean x: 1746582388.0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,370 | INFO     | mean y: 2526949.8093023254
[2025-05-07 06:16:09] 2025-05-07 03:43:56,370 | INFO     | -- intersect: 16866083562.273563
[2025-05-07 06:16:09] 2025-05-07 03:43:56,370 | INFO     | intersect: 16866083562.273563
[2025-05-07 06:16:09] 2025-05-07 03:43:56,370 | INFO     | chi2: 0.16632841953813704
[2025-05-07 06:16:09] 2025-05-07 03:43:56,370 | INFO     | -- intersect: 16866083562.273563
[2025-05-07 06:16:09] 2025-05-07 03:43:56,371 | INFO     | current memory leak: -9.66 B/s (using 215 data points, chi2=0.17)
[2025-05-07 06:16:09] 2025-05-07 03:43:56,371 | INFO     | ..............................
[2025-05-07 06:16:09] 2025-05-07 03:43:56,371 | INFO     | . Timing measurements:
[2025-05-07 06:16:09] 2025-05-07 03:43:56,371 | INFO     | . get job = 0 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,372 | INFO     | . initial setup = 2 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,372 | INFO     | . payload setup = 10 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,372 | INFO     | . stage-in = 0 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,372 | INFO     | . payload execution = 15909 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,372 | INFO     | . stage-out = 3 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,372 | INFO     | . log creation = 1 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,373 | INFO     | ..............................
[2025-05-07 06:16:09] 2025-05-07 03:43:56,886 | INFO     | 
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | job summary report
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | --------------------------------------------------
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | PanDA job id: 6634961283
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | task id: 44506063
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | errors: (none)
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | pilot state: finished 
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | transexitcode: 0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,887 | INFO     | exeerrorcode: 0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | exeerrordiag: 
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | exitcode: 0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | exitmsg: OK
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | cpuconsumptiontime: 57300 s
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | nevents: 400
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | neventsw: 0
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | pid: 6592
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | pgrp: 6592
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | corecount: 8
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | event service: False
[2025-05-07 06:16:09] 2025-05-07 03:43:56,888 | INFO     | sizes: {0: 2393516, 1: 2393715, 7: 2393921, 12: 2393949, 15925: 2424506, 15929: 2433449, 15931: 2433633, 16036: 2433803}
[2025-05-07 06:16:09] 2025-05-07 03:43:56,889 | INFO     | --------------------------------------------------
[2025-05-07 06:16:09] 2025-05-07 03:43:56,889 | INFO     | 
[2025-05-07 06:16:09] 2025-05-07 03:43:56,889 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-05-07 06:16:09] 2025-05-07 03:43:57,403 | INFO     | PID=32481 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-07 06:16:09] 2025-05-07 03:43:57,403 | INFO     | .. there are 2 such processes running
[2025-05-07 06:16:09] 2025-05-07 03:43:57,456 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,456 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,456 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,458 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-07 06:16:09] 2025-05-07 03:43:57,459 | INFO     | job 6634961283 has completed (purged errors)
[2025-05-07 06:16:09] 2025-05-07 03:43:57,459 | INFO     | overall cleanup function is called
[2025-05-07 06:16:09] 2025-05-07 03:43:58,474 | INFO     | --- collectZombieJob: --- 10, [6592]
[2025-05-07 06:16:09] 2025-05-07 03:43:58,475 | INFO     | zombie collector waiting for pid 6592
[2025-05-07 06:16:09] 2025-05-07 03:43:58,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-07 06:16:09] 2025-05-07 03:43:58,475 | INFO     | collected zombie processes
[2025-05-07 06:16:09] 2025-05-07 03:43:58,475 | INFO     | will attempt to kill all subprocesses of pid=6592
[2025-05-07 06:16:09] 2025-05-07 03:43:58,562 | INFO     | process IDs to be killed: [6592] (in reverse order)
[2025-05-07 06:16:09] 2025-05-07 03:43:58,645 | WARNING  | found no corresponding commands to process id(s)
[2025-05-07 06:16:09] 2025-05-07 03:43:58,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-07 06:16:09] 2025-05-07 03:43:58,648 | INFO     | did not find any defunct processes belonging to 6592
[2025-05-07 06:16:09] 2025-05-07 03:43:58,649 | INFO     | did not find any defunct processes belonging to 6592
[2025-05-07 06:16:09] 2025-05-07 03:43:58,650 | INFO     | ready for new job
[2025-05-07 06:16:09] 2025-05-07 03:43:58,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-07 06:16:09] 2025-05-07 03:43:58,652 | INFO     | **************************************
[2025-05-07 06:16:09] 2025-05-07 03:43:58,652 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-07 06:16:09] 2025-05-07 03:43:58,652 | INFO     | **************************************
[2025-05-07 06:16:09] 2025-05-07 03:43:58,652 | INFO     | 
[2025-05-07 06:16:09] 2025-05-07 03:43:58,653 | INFO     | pilot is running in a VM
[2025-05-07 06:16:09] 2025-05-07 03:43:58,653 | INFO     | architecture information:
[2025-05-07 06:16:09] 2025-05-07 03:43:58,653 | INFO     | executing command: cat /etc/os-release
[2025-05-07 06:16:09] 2025-05-07 03:43:58,780 | INFO     | cat /etc/os-release:
[2025-05-07 06:16:09] NAME="CentOS Linux"
[2025-05-07 06:16:09] VERSION="7 (Core)"
[2025-05-07 06:16:09] ID="centos"
[2025-05-07 06:16:09] ID_LIKE="rhel fedora"
[2025-05-07 06:16:09] VERSION_ID="7"
[2025-05-07 06:16:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-07 06:16:09] ANSI_COLOR="0;31"
[2025-05-07 06:16:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-07 06:16:09] HOME_URL="https://www.centos.org/"
[2025-05-07 06:16:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-07 06:16:09] 
[2025-05-07 06:16:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-07 06:16:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-07 06:16:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-07 06:16:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-07 06:16:09] 
[2025-05-07 06:16:09] 2025-05-07 03:43:58,780 | INFO     | **************************************
[2025-05-07 06:16:09] 2025-05-07 03:43:59,283 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-05-07 06:16:09] 2025-05-07 03:43:59,571 | INFO     | sufficient remaining disk space (495790850048 B)
[2025-05-07 06:16:09] 2025-05-07 03:43:59,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-07 06:16:09] 2025-05-07 03:43:59,572 | INFO     | current server update state: UPDATING_FINAL
[2025-05-07 06:16:09] 2025-05-07 03:43:59,572 | INFO     | update_server=False
[2025-05-07 06:16:09] 2025-05-07 03:43:59,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-07 06:16:09] 2025-05-07 03:43:59,572 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-07 06:16:09] 2025-05-07 03:43:59,573 | INFO     | found 0 job(s) in 20 queues
[2025-05-07 06:16:09] 2025-05-07 03:43:59,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-07 06:16:09] 2025-05-07 03:43:59,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-07 06:16:09] 2025-05-07 03:43:59,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-07 06:16:09] 2025-05-07 03:43:59,578 | INFO     | aborting loop
[2025-05-07 06:16:09] 2025-05-07 03:43:59,987 | INFO     | all job control threads have been joined
[2025-05-07 06:16:09] 2025-05-07 03:44:00,143 | INFO     | all data control threads have been joined
[2025-05-07 06:16:09] 2025-05-07 03:44:00,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-07 06:16:09] 2025-05-07 03:44:00,579 | INFO     | [job] retrieve thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:00,584 | INFO     | [job] job monitor thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:00,639 | INFO     | [job] create_data_payload thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:00,686 | INFO     | all payload control threads have been joined
[2025-05-07 06:16:09] 2025-05-07 03:44:00,738 | INFO     | [payload] execute_payloads thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:00,887 | INFO     | [job] validate thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:00,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-07 06:16:09] 2025-05-07 03:44:00,993 | INFO     | [job] control thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:01,021 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:01,149 | INFO     | [data] control thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:01,171 | INFO     | [payload] failed_post thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:01,474 | INFO     | [payload] validate_pre thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:01,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-07 06:16:09] 2025-05-07 03:44:01,692 | INFO     | [payload] control thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:01,697 | INFO     | [data] copytool_in thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:02,147 | INFO     | [payload] validate_post thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:02,441 | INFO     | [data] copytool_out thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:02,529 | INFO     | [job] queue monitor thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:04,951 | INFO     | [data] queue_monitor thread has finished
[2025-05-07 06:16:09] 2025-05-07 03:44:05,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755939653440)>', '<ExcThread(monitor, started 139755241056000)>']
[2025-05-07 06:16:09] 2025-05-07 03:44:05,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-07 06:16:09] 2025-05-07 03:44:05,609 | INFO     | [monitor] control thread has ended
[2025-05-07 06:16:09] 2025-05-07 03:44:10,334 | INFO     | all workflow threads have been joined
[2025-05-07 06:16:09] 2025-05-07 03:44:10,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-07 06:16:09] 2025-05-07 03:44:10,335 | INFO     | traces error code: 0
[2025-05-07 06:16:09] 2025-05-07 03:44:10,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-07 06:16:09] 2025-05-07 03:44:10,662 [wrapper] ==== pilot stdout END ====
[2025-05-07 06:16:09] 2025-05-07 03:44:10,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-07 06:16:09] 2025-05-07 03:44:10,900 [wrapper] pilotpid: 32481
[2025-05-07 06:16:09] 2025-05-07 03:44:11,038 [wrapper] Pilot exit status: 0
[2025-05-07 06:16:09] 2025-05-07 03:44:11,591 [wrapper] pandaids: 6634961283
[2025-05-07 06:16:09] 2025-05-07 03:44:12,418 [wrapper] cleanup supervisor_pilot  2192 32482
[2025-05-07 06:16:09] 2025-05-07 03:44:12,525 [wrapper] Test setup, not cleaning
[2025-05-07 06:16:09] 2025-05-07 03:44:12,623 [wrapper] apfmon messages muted
[2025-05-07 06:16:09] 2025-05-07 03:44:12,720 [wrapper] ==== wrapper stdout END ====
[2025-05-07 06:16:09] 2025-05-07 03:44:12,822 [wrapper] ==== wrapper stderr END ====
[2025-05-07 06:16:09]  *** Error codes and diagnostics ***
[2025-05-07 06:16:09]     "exeErrorCode": 0,
[2025-05-07 06:16:09]     "exeErrorDiag": "",
[2025-05-07 06:16:09]     "pilotErrorCode": 0,
[2025-05-07 06:16:09]     "pilotErrorDiag": "",
[2025-05-07 06:16:09]  *** Listing of results directory ***
[2025-05-07 06:16:09] total 421800
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc    495897 May  6 12:49 pilot3.tar.gz
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc      5111 May  6 13:02 queuedata.json
[2025-05-07 06:16:09] -rwx------. 1 boinc boinc     37140 May  6 13:03 runpilot2-wrapper.sh
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc       100 May  7 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-07 06:16:09] -rwxr-xr-x. 1 boinc boinc      7986 May  7 01:16 run_atlas
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc       105 May  7 01:16 job.xml
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc      6370 May  7 01:16 init_data.xml
[2025-05-07 06:16:09] -rw-r--r--. 2 boinc boinc 225846686 May  7 01:16 EVNT.44506061._000931.pool.root.1
[2025-05-07 06:16:09] -rw-r--r--. 2 boinc boinc     17569 May  7 01:16 start_atlas.sh
[2025-05-07 06:16:09] drwxrwx--x. 2 boinc boinc        68 May  7 01:16 shared
[2025-05-07 06:16:09] -rw-r--r--. 2 boinc boinc    508878 May  7 01:16 input.tar.gz
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc         0 May  7 01:16 boinc_lockfile
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc      2556 May  7 01:16 pandaJob.out
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc       424 May  7 01:16 setup.sh.local
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc    998332 May  7 01:16 agis_schedconf.cvmfs.json
[2025-05-07 06:16:09] drwx------. 4 boinc boinc      4096 May  7 01:16 pilot3
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc 198670021 May  7 05:40 HITS.44506063._023333.pool.root.1
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc       531 May  7 05:40 boinc_task_state.xml
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc      1020 May  7 05:42 memory_monitor_summary.json
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc   1596741 May  7 05:42 agis_ddmendpoints.agis.ALL.json
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc    400469 May  7 05:42 log.44506063._023333.job.log.tgz.1
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc        95 May  7 05:43 pilot_heartbeat.json
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc      7695 May  7 05:43 heartbeat.json
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc      4540 May  7 05:44 pilotlog.txt
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc   1386243 May  7 05:44 log.44506063._023333.job.log.1
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc       357 May  7 05:44 output.list
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc       620 May  7 05:44 runtime_log
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc   1802240 May  7 05:44 result.tar.gz
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc     11031 May  7 05:44 runtime_log.err
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc       657 May  7 05:44 k1NLDmHGVW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmL93LDmTVVKRm.diag
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc      8192 May  7 06:16 boinc_mmap_file
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc        28 May  7 06:16 wrapper_checkpoint.txt
[2025-05-07 06:16:09] -rw-r--r--. 1 boinc boinc     20559 May  7 06:16 stderr.txt
[2025-05-07 06:16:09] HITS file was successfully produced:
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc 198670021 May  7 05:40 shared/HITS.pool.root.1
[2025-05-07 06:16:09]  *** Contents of shared directory: ***
[2025-05-07 06:16:09] total 416852
[2025-05-07 06:16:09] -rw-r--r--. 2 boinc boinc 225846686 May  7 01:16 ATLAS.root_0
[2025-05-07 06:16:09] -rw-r--r--. 2 boinc boinc     17569 May  7 01:16 start_atlas.sh
[2025-05-07 06:16:09] -rw-r--r--. 2 boinc boinc    508878 May  7 01:16 input.tar.gz
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc 198670021 May  7 05:40 HITS.pool.root.1
[2025-05-07 06:16:09] -rw-------. 1 boinc boinc   1802240 May  7 05:44 result.tar.gz
06:16:11 (28605): run_atlas exited; CPU time 57427.940600
06:16:11 (28605): called boinc_finish(0)

</stderr_txt>
]]>

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