Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:14:10 (30671): wrapper (7.7.26015): starting
12:14:10 (30671): wrapper: running run_atlas (--nthreads 12)
[2025-05-06 12:14:10] Arguments: --nthreads 12
[2025-05-06 12:14:10] Threads: 12
[2025-05-06 12:14:10] Checking for CVMFS
[2025-05-06 12:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-06 12:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-06 12:14:10] Running cvmfs_config stat atlas.cern.ch
[2025-05-06 12:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-06 12:14:10] 2.11.2.0 24956 394844 164608 145681 0 56 10806480 20275200 1 130560 0 37547138 99.965 13506791 44120 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-06 12:14:10] CVMFS is ok
[2025-05-06 12:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-06 12:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-06 12:14:10] Further information can be found at the LHC@home message board.
[2025-05-06 12:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-06 12:14:10] Checking for apptainer binary...
[2025-05-06 12:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-06 12:14:10] Running /usr/bin/apptainer --version
[2025-05-06 12:14:10] apptainer version 1.3.2-1.el7
[2025-05-06 12:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-06 12:14:12] c-205-8.aglt2.org
[2025-05-06 12:14:12] apptainer works
[2025-05-06 12:14:12] Set ATHENA_PROC_NUMBER=12
[2025-05-06 12:14:12] Set ATHENA_CORE_NUMBER=12
[2025-05-06 12:14:12] Starting ATLAS job with PandaID=6634838351
[2025-05-06 12:14:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 13:48:34]  *** The last 200 lines of the pilot log: ***
[2025-05-06 13:48:34]  filesize=364661
[2025-05-06 13:48:34]  filetype=log
[2025-05-06 13:48:34]  guid=65468b3a-d351-4864-8272-69c04e154fce
[2025-05-06 13:48:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-06 13:48:34]  is_altstaged=None
[2025-05-06 13:48:34]  is_tar=False
[2025-05-06 13:48:34]  lfn=log.44506063._022243.job.log.tgz.1
[2025-05-06 13:48:34]  mtime=0
[2025-05-06 13:48:34]  protocol_id=None
[2025-05-06 13:48:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-06 13:48:34]  replicas=None
[2025-05-06 13:48:34]  scope=mc23_13p6TeV
[2025-05-06 13:48:34]  status=None
[2025-05-06 13:48:34]  status_code=0
[2025-05-06 13:48:34]  storage_token=
[2025-05-06 13:48:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6634838351/log.44506063._022243.job.log.tgz.1
[2025-05-06 13:48:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/23/log.44506063._022243.job.log.tgz.1
[2025-05-06 13:48:34]  workdir=None
[2025-05-06 13:48:34] ]
[2025-05-06 13:48:34] 2025-05-06 17:48:09,780 | INFO     | transferring file log.44506063._022243.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6634838351/log.44506063._022243.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-06 13:48:34] 2025-05-06 17:48:09,780 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6634838351/log.44506063._022243.job.log.tgz.1 /tmp/boinchome/slots/0/log.44506063._022243.job
[2025-05-06 13:48:34] 2025-05-06 17:48:09,802 | INFO     | adding to output.list: log.44506063._022243.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/23/log.44506063._022243.job.log.tg
[2025-05-06 13:48:34] 2025-05-06 17:48:09,803 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-06 13:48:34] 2025-05-06 17:48:09,804 | INFO     | summary of transferred files:
[2025-05-06 13:48:34] 2025-05-06 17:48:09,804 | INFO     |  -- lfn=log.44506063._022243.job.log.tgz.1, status_code=0, status=transferred
[2025-05-06 13:48:34] 2025-05-06 17:48:09,804 | INFO     | stage-out finished correctly
[2025-05-06 13:48:34] 2025-05-06 17:48:10,881 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-06 13:48:34] 2025-05-06 17:48:10,905 | INFO     | monitor loop #421: job 0:6634838351 is in state 'finished'
[2025-05-06 13:48:34] 2025-05-06 17:48:10,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 13:48:34] 2025-05-06 17:48:10,963 | INFO     | job 6634838351 has state=finished
[2025-05-06 13:48:34] 2025-05-06 17:48:10,964 | INFO     | preparing for final server update for job 6634838351 in state='finished'
[2025-05-06 13:48:34] 2025-05-06 17:48:10,964 | INFO     | this job has now completed (state=finished)
[2025-05-06 13:48:34] 2025-05-06 17:48:10,964 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-06 13:48:34] 2025-05-06 17:48:10,964 | INFO     | log transfer has been attempted: DONE
[2025-05-06 13:48:34] 2025-05-06 17:48:10,965 | INFO     | job 6634838351 has finished - writing final server update
[2025-05-06 13:48:34] 2025-05-06 17:48:10,965 | INFO     | total number of processed events: 400 (read)
[2025-05-06 13:48:34] 2025-05-06 17:48:10,967 | INFO     | executing command: lscpu
[2025-05-06 13:48:34] 2025-05-06 17:48:10,994 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-06 13:48:34] 2025-05-06 17:48:13,413 | INFO     | monitor loop #422: job 0:6634838351 is in state 'finished'
[2025-05-06 13:48:34] 2025-05-06 17:48:13,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 13:48:34] 2025-05-06 17:48:15,693 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-06 13:48:34] 2025-05-06 17:48:15,694 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6634838351/memory_monitor_summary.json (trf name=prmon)
[2025-05-06 13:48:34] 2025-05-06 17:48:15,695 | INFO     | extracted standard info from prmon json
[2025-05-06 13:48:34] 2025-05-06 17:48:15,695 | INFO     | extracted standard memory fields from prmon json
[2025-05-06 13:48:34] 2025-05-06 17:48:15,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-06 13:48:34] 2025-05-06 17:48:15,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-06 13:48:34] 2025-05-06 17:48:15,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-06 13:48:34] 2025-05-06 17:48:15,699 | INFO     | fitting pss+swap vs Time
[2025-05-06 13:48:34] 2025-05-06 17:48:15,699 | INFO     | sum of square deviations: 190403570.0
[2025-05-06 13:48:34] 2025-05-06 17:48:15,699 | INFO     | sum of deviations: 23714505423.999996
[2025-05-06 13:48:34] 2025-05-06 17:48:15,700 | INFO     | mean x: 1746550962.0
[2025-05-06 13:48:34] 2025-05-06 17:48:15,700 | INFO     | mean y: 2688937.705882353
[2025-05-06 13:48:34] 2025-05-06 17:48:15,700 | INFO     | -- intersect: -217527855587.49084
[2025-05-06 13:48:34] 2025-05-06 17:48:15,700 | INFO     | intersect: -217527855587.49084
[2025-05-06 13:48:34] 2025-05-06 17:48:15,700 | INFO     | chi2: 2.452158240899149
[2025-05-06 13:48:34] 2025-05-06 17:48:15,700 | INFO     | -- intersect: -217527855587.49084
[2025-05-06 13:48:34] 2025-05-06 17:48:15,700 | INFO     | current memory leak: 124.55 B/s (using 85 data points, chi2=2.45)
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | ..............................
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | . Timing measurements:
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | . get job = 0 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | . initial setup = 2 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | . payload setup = 8 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | . stage-in = 0 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | . payload execution = 5595 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,701 | INFO     | . stage-out = 0 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,702 | INFO     | . log creation = 0 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,702 | INFO     | ..............................
[2025-05-06 13:48:34] 2025-05-06 17:48:15,785 | INFO     | 
[2025-05-06 13:48:34] 2025-05-06 17:48:15,786 | INFO     | job summary report
[2025-05-06 13:48:34] 2025-05-06 17:48:15,786 | INFO     | --------------------------------------------------
[2025-05-06 13:48:34] 2025-05-06 17:48:15,786 | INFO     | PanDA job id: 6634838351
[2025-05-06 13:48:34] 2025-05-06 17:48:15,786 | INFO     | task id: 44506063
[2025-05-06 13:48:34] 2025-05-06 17:48:15,786 | INFO     | errors: (none)
[2025-05-06 13:48:34] 2025-05-06 17:48:15,786 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 13:48:34] 2025-05-06 17:48:15,787 | INFO     | pilot state: finished 
[2025-05-06 13:48:34] 2025-05-06 17:48:15,787 | INFO     | transexitcode: 0
[2025-05-06 13:48:34] 2025-05-06 17:48:15,787 | INFO     | exeerrorcode: 0
[2025-05-06 13:48:34] 2025-05-06 17:48:15,787 | INFO     | exeerrordiag: 
[2025-05-06 13:48:34] 2025-05-06 17:48:15,787 | INFO     | exitcode: 0
[2025-05-06 13:48:34] 2025-05-06 17:48:15,787 | INFO     | exitmsg: OK
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | cpuconsumptiontime: 52965 s
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | nevents: 400
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | neventsw: 0
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | pid: 8385
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | pgrp: 8385
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | corecount: 12
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | event service: False
[2025-05-06 13:48:34] 2025-05-06 17:48:15,788 | INFO     | sizes: {0: 2393566, 1: 2393765, 6: 2393971, 11: 2393999, 5607: 2420434, 5608: 2429375, 5609: 2429559, 5614: 2429729}
[2025-05-06 13:48:34] 2025-05-06 17:48:15,789 | INFO     | --------------------------------------------------
[2025-05-06 13:48:34] 2025-05-06 17:48:15,789 | INFO     | 
[2025-05-06 13:48:34] 2025-05-06 17:48:15,789 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-06 13:48:34] 2025-05-06 17:48:15,811 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,812 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 13:48:34] 2025-05-06 17:48:15,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 13:48:34] 2025-05-06 17:48:15,814 | INFO     | job 6634838351 has completed (purged errors)
[2025-05-06 13:48:34] 2025-05-06 17:48:15,815 | INFO     | overall cleanup function is called
[2025-05-06 13:48:34] 2025-05-06 17:48:16,823 | INFO     | --- collectZombieJob: --- 10, [8385]
[2025-05-06 13:48:34] 2025-05-06 17:48:16,823 | INFO     | zombie collector waiting for pid 8385
[2025-05-06 13:48:34] 2025-05-06 17:48:16,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 13:48:34] 2025-05-06 17:48:16,823 | INFO     | collected zombie processes
[2025-05-06 13:48:34] 2025-05-06 17:48:16,824 | INFO     | will attempt to kill all subprocesses of pid=8385
[2025-05-06 13:48:34] 2025-05-06 17:48:16,915 | INFO     | process IDs to be killed: [8385] (in reverse order)
[2025-05-06 13:48:34] 2025-05-06 17:48:16,965 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 13:48:34] 2025-05-06 17:48:16,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 13:48:34] 2025-05-06 17:48:16,969 | INFO     | did not find any defunct processes belonging to 8385
[2025-05-06 13:48:34] 2025-05-06 17:48:16,972 | INFO     | did not find any defunct processes belonging to 8385
[2025-05-06 13:48:34] 2025-05-06 17:48:16,972 | INFO     | ready for new job
[2025-05-06 13:48:34] 2025-05-06 17:48:16,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 13:48:34] 2025-05-06 17:48:16,973 | INFO     | **************************************
[2025-05-06 13:48:34] 2025-05-06 17:48:16,973 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 13:48:34] 2025-05-06 17:48:16,973 | INFO     | **************************************
[2025-05-06 13:48:34] 2025-05-06 17:48:16,974 | INFO     | 
[2025-05-06 13:48:34] 2025-05-06 17:48:16,974 | INFO     | architecture information:
[2025-05-06 13:48:34] 2025-05-06 17:48:16,975 | INFO     | executing command: cat /etc/os-release
[2025-05-06 13:48:34] 2025-05-06 17:48:16,990 | INFO     | cat /etc/os-release:
[2025-05-06 13:48:34] NAME="CentOS Linux"
[2025-05-06 13:48:34] VERSION="7 (Core)"
[2025-05-06 13:48:34] ID="centos"
[2025-05-06 13:48:34] ID_LIKE="rhel fedora"
[2025-05-06 13:48:34] VERSION_ID="7"
[2025-05-06 13:48:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 13:48:34] ANSI_COLOR="0;31"
[2025-05-06 13:48:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 13:48:34] HOME_URL="https://www.centos.org/"
[2025-05-06 13:48:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 13:48:34] 
[2025-05-06 13:48:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 13:48:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 13:48:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 13:48:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 13:48:34] 
[2025-05-06 13:48:34] 2025-05-06 17:48:16,990 | INFO     | **************************************
[2025-05-06 13:48:34] 2025-05-06 17:48:17,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-06 13:48:34] 2025-05-06 17:48:17,508 | INFO     | sufficient remaining disk space (29385293824 B)
[2025-05-06 13:48:34] 2025-05-06 17:48:17,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 13:48:34] 2025-05-06 17:48:17,508 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 13:48:34] 2025-05-06 17:48:17,509 | INFO     | update_server=False
[2025-05-06 13:48:34] 2025-05-06 17:48:17,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 13:48:34] 2025-05-06 17:48:17,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:48:34] 2025-05-06 17:48:17,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 13:48:34] 2025-05-06 17:48:17,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:48:34] 2025-05-06 17:48:17,510 | INFO     | aborting loop
[2025-05-06 13:48:34] 2025-05-06 17:48:17,754 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 13:48:34] 2025-05-06 17:48:17,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 13:48:34] 2025-05-06 17:48:17,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 13:48:34] 2025-05-06 17:48:17,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 13:48:34] 2025-05-06 17:48:18,128 | INFO     | all data control threads have been joined
[2025-05-06 13:48:34] 2025-05-06 17:48:18,510 | INFO     | [job] retrieve thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:18,513 | INFO     | [job] job monitor thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:18,515 | INFO     | [job] queue monitor thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:18,526 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:18,682 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:18,848 | INFO     | all job control threads have been joined
[2025-05-06 13:48:34] 2025-05-06 17:48:18,927 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:18,938 | INFO     | all payload control threads have been joined
[2025-05-06 13:48:34] 2025-05-06 17:48:19,133 | INFO     | [data] control thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:19,216 | INFO     | [data] copytool_in thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:19,582 | INFO     | [job] validate thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:19,605 | INFO     | [payload] validate_post thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:19,815 | INFO     | [payload] failed_post thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:19,853 | INFO     | [job] control thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:19,905 | INFO     | [data] copytool_out thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:19,943 | INFO     | [payload] control thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:21,516 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:27,901 | INFO     | job.realtimelogging is not enabled
[2025-05-06 13:48:34] 2025-05-06 17:48:28,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 13:48:34] 2025-05-06 17:48:29,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774776301376)>', '<ExcThread(monitor, started 139774182541056)>']
[2025-05-06 13:48:34] 2025-05-06 17:48:29,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 13:48:34] 2025-05-06 17:48:29,807 | INFO     | [monitor] control thread has ended
[2025-05-06 13:48:34] 2025-05-06 17:48:34,131 | INFO     | all workflow threads have been joined
[2025-05-06 13:48:34] 2025-05-06 17:48:34,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 13:48:34] 2025-05-06 17:48:34,131 | INFO     | traces error code: 0
[2025-05-06 13:48:34] 2025-05-06 17:48:34,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 13:48:34] 2025-05-06 17:48:34,220 [wrapper] ==== pilot stdout END ====
[2025-05-06 13:48:34] 2025-05-06 17:48:34,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 13:48:34] 2025-05-06 17:48:34,227 [wrapper] pilotpid: 1973
[2025-05-06 13:48:34] 2025-05-06 17:48:34,231 [wrapper] Pilot exit status: 0
[2025-05-06 13:48:34] 2025-05-06 17:48:34,244 [wrapper] pandaids: 6634838351
[2025-05-06 13:48:34] 2025-05-06 17:48:34,283 [wrapper] cleanup supervisor_pilot 27014 1974
[2025-05-06 13:48:34] 2025-05-06 17:48:34,287 [wrapper] Test setup, not cleaning
[2025-05-06 13:48:34] 2025-05-06 17:48:34,291 [wrapper] apfmon messages muted
[2025-05-06 13:48:34] 2025-05-06 17:48:34,294 [wrapper] ==== wrapper stdout END ====
[2025-05-06 13:48:34] 2025-05-06 17:48:34,298 [wrapper] ==== wrapper stderr END ====
[2025-05-06 13:48:34]  *** Error codes and diagnostics ***
[2025-05-06 13:48:34]     "exeErrorCode": 0,
[2025-05-06 13:48:34]     "exeErrorDiag": "",
[2025-05-06 13:48:34]     "pilotErrorCode": 0,
[2025-05-06 13:48:34]     "pilotErrorDiag": "",
[2025-05-06 13:48:34]  *** Listing of results directory ***
[2025-05-06 13:48:34] total 420072
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas    495897 May  6 04:49 pilot3.tar.gz
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas      5111 May  6 05:21 queuedata.json
[2025-05-06 13:48:34] -rwx------ 1 boincer umatlas     37140 May  6 05:23 runpilot2-wrapper.sh
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas       100 May  6 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 13:48:34] -rwxr-xr-x 1 boincer umatlas      7986 May  6 12:14 run_atlas
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas       105 May  6 12:14 job.xml
[2025-05-06 13:48:34] -rw-r--r-- 2 boincer umatlas 222459948 May  6 12:14 EVNT.44506061._000889.pool.root.1
[2025-05-06 13:48:34] -rw-r--r-- 2 boincer umatlas     17569 May  6 12:14 start_atlas.sh
[2025-05-06 13:48:34] drwxrwx--x 2 boincer umatlas      4096 May  6 12:14 shared
[2025-05-06 13:48:34] -rw-r--r-- 2 boincer umatlas    508877 May  6 12:14 input.tar.gz
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas         0 May  6 12:14 boinc_lockfile
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas      2557 May  6 12:14 pandaJob.out
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas       424 May  6 12:14 setup.sh.local
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas    998316 May  6 12:14 agis_schedconf.cvmfs.json
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas   1596741 May  6 12:14 agis_ddmendpoints.agis.ALL.json
[2025-05-06 13:48:34] drwx------ 4 boincer umatlas      4096 May  6 12:14 pilot3
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas      5866 May  6 13:39 init_data.xml
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas        95 May  6 13:47 pilot_heartbeat.json
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas 202055370 May  6 13:47 HITS.44506063._022243.pool.root.1
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas      1046 May  6 13:48 memory_monitor_summary.json
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas    364661 May  6 13:48 log.44506063._022243.job.log.tgz.1
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas       530 May  6 13:48 boinc_task_state.xml
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas      7747 May  6 13:48 heartbeat.json
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas      8192 May  6 13:48 boinc_mmap_file
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas        27 May  6 13:48 wrapper_checkpoint.txt
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas      4425 May  6 13:48 pilotlog.txt
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas    528568 May  6 13:48 log.44506063._022243.job.log.1
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas       357 May  6 13:48 output.list
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas       620 May  6 13:48 runtime_log
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas    911360 May  6 13:48 result.tar.gz
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas     11010 May  6 13:48 runtime_log.err
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas       657 May  6 13:48 pyFMDmDhTW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmuy3LDmNrcEvn.diag
[2025-05-06 13:48:34] -rw-r--r-- 1 boincer umatlas     21080 May  6 13:48 stderr.txt
[2025-05-06 13:48:34] HITS file was successfully produced:
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas 202055370 May  6 13:47 shared/HITS.pool.root.1
[2025-05-06 13:48:34]  *** Contents of shared directory: ***
[2025-05-06 13:48:34] total 415988
[2025-05-06 13:48:34] -rw-r--r-- 2 boincer umatlas 222459948 May  6 12:14 ATLAS.root_0
[2025-05-06 13:48:34] -rw-r--r-- 2 boincer umatlas     17569 May  6 12:14 start_atlas.sh
[2025-05-06 13:48:34] -rw-r--r-- 2 boincer umatlas    508877 May  6 12:14 input.tar.gz
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas 202055370 May  6 13:47 HITS.pool.root.1
[2025-05-06 13:48:34] -rw------- 1 boincer umatlas    911360 May  6 13:48 result.tar.gz
13:48:35 (30671): run_atlas exited; CPU time 52946.847005
13:48:35 (30671): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN