Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-06 10:10:36 (6664): Detected: vboxwrapper 26206
2025-05-06 10:10:36 (6664): Detected: BOINC client v7.20.2
2025-05-06 10:10:37 (6664): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-06 10:10:37 (6664): Successfully copied 'init_data.xml' to the shared directory.
2025-05-06 10:10:37 (6664): Create VM. (boinc_25dc59381de41608, slot#14)
2025-05-06 10:10:38 (6664): Setting Memory Size for VM. (4100MB)
2025-05-06 10:10:38 (6664): Setting CPU Count for VM. (1)
2025-05-06 10:10:39 (6664): Setting Chipset Options for VM.
2025-05-06 10:10:39 (6664): Setting Graphics Controller Options for VM.
2025-05-06 10:10:39 (6664): Setting Boot Options for VM.
2025-05-06 10:10:39 (6664): Setting Network Configuration for NAT.
2025-05-06 10:10:40 (6664): Enabling VM Network Access.
2025-05-06 10:10:40 (6664): Disabling USB Support for VM.
2025-05-06 10:10:40 (6664): Disabling COM Port Support for VM.
2025-05-06 10:10:40 (6664): Disabling LPT Port Support for VM.
2025-05-06 10:10:41 (6664): Disabling Audio Support for VM.
2025-05-06 10:10:41 (6664): Disabling Clipboard Support for VM.
2025-05-06 10:10:41 (6664): Disabling Drag and Drop Support for VM.
2025-05-06 10:10:41 (6664): Adding storage controller(s) to VM.
2025-05-06 10:10:42 (6664): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-06 10:10:44 (6664): Adding VirtualBox Guest Additions to VM.
2025-05-06 10:10:45 (6664): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-06 10:10:45 (6664): forwarding host port 52119 to guest port 80
2025-05-06 10:10:45 (6664): Enabling remote desktop for VM.
2025-05-06 10:10:45 (6664): Required extension pack not installed, remote desktop not enabled.
2025-05-06 10:10:45 (6664): Enabling shared directory for VM.
2025-05-06 10:10:46 (6664): Starting VM using VBoxManage interface. (boinc_25dc59381de41608, slot#14)
2025-05-06 10:10:56 (6664): Successfully started VM. (PID = '12596')
2025-05-06 10:10:56 (6664): Reporting VM Process ID to BOINC.
2025-05-06 10:10:56 (6664): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-06 10:10:56 (6664): Guest Log: CPUID EDX: 0x178bfbff
2025-05-06 10:10:56 (6664): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-06 10:10:56 (6664): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-06 10:10:56 (6664): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-06 10:10:56 (6664): Guest Log: BIOS: Booting from Hard Disk...
2025-05-06 10:10:56 (6664): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-06 10:10:56 (6664): Detected: Web Application Enabled (http://localhost:52119)
2025-05-06 10:10:56 (6664): Preference change detected
2025-05-06 10:10:56 (6664): Setting CPU throttle for VM. (100%)
2025-05-06 10:10:57 (6664): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-06 10:10:57 (6664): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-06 10:10:57 (6664): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-06 10:10:57 (6664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-06 10:11:03 (6664): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-06 10:11:03 (6664): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-06 10:11:13 (6664): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.000189 main     Log opened 2025-05-06T10:11:11.626240000Z
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.000324 main     OS Product: Linux
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.000373 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.000413 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.000450 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.000451 main     Process ID: 1257
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.000452 main     Package type: LINUX_64BITS_GENERIC
2025-05-06 10:11:13 (6664): Guest Log: 00:00:00.001862 main     5.2.32 r132073 started. Verbose level = 0
2025-05-06 10:11:13 (6664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-06 10:11:13 (6664): Guest Log: [INFO] Mounting shared directory
2025-05-06 10:11:13 (6664): Guest Log: [INFO] Checking for init_data.xml
2025-05-06 10:11:19 (6664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-06 10:11:19 (6664): Guest Log: [INFO] Detected branch: prod
2025-05-06 10:11:19 (6664): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-06 10:11:19 (6664): Guest Log: Copying input files
2025-05-06 10:11:21 (6664): Guest Log: Copied input files into RunAtlas.
2025-05-06 10:11:21 (6664): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-06 10:11:21 (6664): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-06 10:11:21 (6664): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-06 10:11:21 (6664): Guest Log: Further information can be found at the LHC@home message board.
2025-05-06 10:11:23 (6664): Guest Log: 00:00:10.023626 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 683 777 000ns (GuestNow=1 746 522 682 965 419 000 ns GuestLast=1 746 526 271 649 196 000 ns fSetTimeLastLoop=true )
2025-05-06 10:11:30 (6664): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-06 10:11:30 (6664): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-06 10:11:30 (6664): Guest Log: 2.6.3.0 1527 0 32268 145669 4 1 3119969 4096000 0 65024 0 0 n/a 1171 2419 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-06 10:11:31 (6664): Guest Log: copied the webapp to /var/www
2025-05-06 10:11:31 (6664): Guest Log: core_number=1
2025-05-06 10:11:31 (6664): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-06 10:11:31 (6664): Guest Log:  *** Starting ATLAS job. (PandaID=6634788728 taskID=44506063) ***
2025-05-06 12:33:01 (6664): Status Report: Elapsed Time: '6000.762749'
2025-05-06 12:33:01 (6664): Status Report: CPU Time: '7925.781250'
2025-05-06 15:04:50 (6664): Status Report: Elapsed Time: '12002.745449'
2025-05-06 15:04:55 (6664): Status Report: CPU Time: '17008.265625'
2025-05-06 17:36:49 (6664): Status Report: Elapsed Time: '18003.292698'
2025-05-06 17:36:49 (6664): Status Report: CPU Time: '26094.812500'
2025-05-06 19:56:54 (6664): Status Report: Elapsed Time: '24003.805347'
2025-05-06 19:56:54 (6664): Status Report: CPU Time: '34466.093750'
2025-05-06 21:38:37 (6664): Status Report: Elapsed Time: '30004.172323'
2025-05-06 21:38:37 (6664): Status Report: CPU Time: '40533.593750'
2025-05-06 23:20:53 (6664): Status Report: Elapsed Time: '36004.541250'
2025-05-06 23:20:53 (6664): Status Report: CPU Time: '46643.593750'
2025-05-07 01:03:02 (6664): Status Report: Elapsed Time: '42004.756962'
2025-05-07 01:03:02 (6664): Status Report: CPU Time: '52748.156250'
2025-05-07 02:44:39 (6664): Status Report: Elapsed Time: '48004.993361'
2025-05-07 02:44:39 (6664): Status Report: CPU Time: '58811.531250'
2025-05-07 04:05:52 (6664): Guest Log:  *** Job finished ***
2025-05-07 04:05:52 (6664): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:21,242 | INFO     | [data] copytool_out thread has finished
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:21,829 | INFO     | [job] queue monitor thread has finished
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:22,877 | INFO     | [data] queue_monitor thread has finished
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:23,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371113187136)>', '<ExcThread(monitor, started 140370528691968)>']
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:24,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:24,026 | INFO     | [monitor] control thread has ended
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,070 | INFO     | all workflow threads have been joined
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,071 | INFO     | end of generic workflow (traces error code: 0)
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,071 | INFO     | traces error code: 0
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,204 [wrapper] ==== pilot stdout END ====
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,208 [wrapper] ==== wrapper stdout RESUME ====
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,212 [wrapper] pilotpid: 5802
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,216 [wrapper] Pilot exit status: 0
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,406 [wrapper] pandaids: 6634788728
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,428 [wrapper] cleanup supervisor_pilot 29126 5803
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,432 [wrapper] Test setup, not cleaning
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,436 [wrapper] apfmon messages muted
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,440 [wrapper] ==== wrapper stdout END ====
2025-05-07 04:05:52 (6664): Guest Log: 2025-05-07 03:05:28,444 [wrapper] ==== wrapper stderr END ====
2025-05-07 04:05:52 (6664): Guest Log:  *** Error codes and diagnostics ***
2025-05-07 04:05:52 (6664): Guest Log:     "exeErrorCode": 0,
2025-05-07 04:05:52 (6664): Guest Log:     "exeErrorDiag": "",
2025-05-07 04:05:52 (6664): Guest Log:     "pilotErrorCode": 0,
2025-05-07 04:05:52 (6664): Guest Log:     "pilotErrorDiag": "",
2025-05-07 04:05:52 (6664): Guest Log:  *** Listing of results directory ***
2025-05-07 04:05:52 (6664): Guest Log: total 210124
2025-05-07 04:05:52 (6664): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  6 05:33 pilot3.tar.gz
2025-05-07 04:05:52 (6664): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  6 05:43 queuedata.json
2025-05-07 04:05:52 (6664): Guest Log: -rwx------. 1 atlas atlas     37140 May  6 05:44 runpilot2-wrapper.sh
2025-05-07 04:05:52 (6664): Guest Log: -rwxr-xr-x. 1 atlas atlas     10547 May  6 09:11 init_data.xml
2025-05-07 04:05:52 (6664): Guest Log: -rwxr-xr-x. 1 atlas atlas    508882 May  6 09:11 input.tar.gz
2025-05-07 04:05:52 (6664): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  6 09:11 start_atlas.sh
2025-05-07 04:05:52 (6664): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  6 09:11 EVNT.44506061._000804.pool.root.1 -> /data/./ATLAS.root_0
2025-05-07 04:05:52 (6664): Guest Log: -rw-r--r--. 1 atlas atlas      2556 May  6 09:11 pandaJob.out
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas       424 May  6 09:11 setup.sh.local
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas    997554 May  6 09:12 agis_schedconf.cvmfs.json
2025-05-07 04:05:52 (6664): Guest Log: drwx------. 4 atlas atlas      4096 May  6 09:12 pilot3
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas 198846486 May  7 03:04 HITS.44506063._020120.pool.root.1
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas      1024 May  7 03:04 memory_monitor_summary.json
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas   1596741 May  7 03:05 agis_ddmendpoints.agis.ALL.json
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas    714927 May  7 03:05 log.44506063._020120.job.log.tgz.1
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas        95 May  7 03:05 pilot_heartbeat.json
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas      7681 May  7 03:05 heartbeat.json
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas      4599 May  7 03:05 pilotlog.txt
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas   5554849 May  7 03:05 log.44506063._020120.job.log.1
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas       357 May  7 03:05 output.list
2025-05-07 04:05:52 (6664): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  7 03:05 runtime_log
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas   6287360 May  7 03:05 result.tar.gz
2025-05-07 04:05:52 (6664): Guest Log: -rw-r--r--. 1 atlas atlas     10811 May  7 03:05 runtime_log.err
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas       658 May  7 03:05 aDoNDmpHQW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmUX3LDmqfLoUn.diag
2025-05-07 04:05:52 (6664): Guest Log: Looking for outputfile HITS.44506063._020120.pool.root.1
2025-05-07 04:05:52 (6664): Guest Log: HITS file was successfully produced
2025-05-07 04:05:52 (6664): Guest Log: -rw-------. 1 atlas atlas 198846486 May  7 03:04 /home/atlas/RunAtlas/HITS.44506063._020120.pool.root.1
2025-05-07 04:05:53 (6664): Guest Log: Successfully finished the ATLAS job!
2025-05-07 04:05:53 (6664): Guest Log: Copying the results back to the shared directory!
2025-05-07 04:05:53 (6664): Guest Log:  *** Contents of shared directory: ***
2025-05-07 04:05:53 (6664): Guest Log: total 420404
2025-05-07 04:05:53 (6664): Guest Log: -rwxrwxrwx. 1 root root 224809772 May  6 09:10 ATLAS.root_0
2025-05-07 04:05:53 (6664): Guest Log: -rwxrwxrwx. 1 root root 198846486 May  7  2025 HITS.pool.root.1
2025-05-07 04:05:53 (6664): Guest Log: -rwxrwxrwx. 1 root root     10547 May  6 09:10 init_data.xml
2025-05-07 04:05:53 (6664): Guest Log: -rwxrwxrwx. 1 root root    508882 May  6 09:10 input.tar.gz
2025-05-07 04:05:53 (6664): Guest Log: -rwxrwxrwx. 1 root root   6287360 May  7  2025 result.tar.gz
2025-05-07 04:05:53 (6664): Guest Log: -rwxrwxrwx. 1 root root     17569 May  6 09:10 start_atlas.sh
2025-05-07 04:05:54 (6664): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-07 04:05:54 (6664): VM Completion File Detected.
2025-05-07 04:05:54 (6664): Powering off VM.
2025-05-07 04:05:55 (6664): Successfully stopped VM.
2025-05-07 04:05:55 (6664): Deregistering VM. (boinc_25dc59381de41608, slot#14)
2025-05-07 04:05:55 (6664): Removing network bandwidth throttle group from VM.
2025-05-07 04:05:55 (6664): Removing VM from VirtualBox.
04:06:00 (6664): called boinc_finish(0)

</stderr_txt>
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