Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-06 01:29:21 (10584): Detected: vboxwrapper 26206
2025-05-06 01:29:21 (10584): Detected: BOINC client v8.0.2
2025-05-06 01:29:22 (10584): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-06 01:29:22 (10584): Successfully copied 'init_data.xml' to the shared directory.
2025-05-06 01:29:23 (10584): Create VM. (boinc_081a949525861946, slot#2)
2025-05-06 01:29:23 (10584): Setting Memory Size for VM. (4800MB)
2025-05-06 01:29:24 (10584): Setting CPU Count for VM. (8)
2025-05-06 01:29:24 (10584): Setting Chipset Options for VM.
2025-05-06 01:29:24 (10584): Setting Graphics Controller Options for VM.
2025-05-06 01:29:24 (10584): Setting Boot Options for VM.
2025-05-06 01:29:25 (10584): Setting Network Configuration for NAT.
2025-05-06 01:29:25 (10584): Enabling VM Network Access.
2025-05-06 01:29:25 (10584): Disabling USB Support for VM.
2025-05-06 01:29:25 (10584): Disabling COM Port Support for VM.
2025-05-06 01:29:26 (10584): Disabling LPT Port Support for VM.
2025-05-06 01:29:26 (10584): Disabling Audio Support for VM.
2025-05-06 01:29:26 (10584): Disabling Clipboard Support for VM.
2025-05-06 01:29:27 (10584): Disabling Drag and Drop Support for VM.
2025-05-06 01:29:27 (10584): Adding storage controller(s) to VM.
2025-05-06 01:29:27 (10584): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-06 01:29:30 (10584): Adding VirtualBox Guest Additions to VM.
2025-05-06 01:29:30 (10584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-06 01:29:31 (10584): forwarding host port 62763 to guest port 80
2025-05-06 01:29:31 (10584): Enabling remote desktop for VM.
2025-05-06 01:29:31 (10584): Required extension pack not installed, remote desktop not enabled.
2025-05-06 01:29:31 (10584): Enabling shared directory for VM.
2025-05-06 01:29:32 (10584): Starting VM using VBoxManage interface. (boinc_081a949525861946, slot#2)
2025-05-06 01:29:37 (10584): Successfully started VM. (PID = '38668')
2025-05-06 01:29:37 (10584): Reporting VM Process ID to BOINC.
2025-05-06 01:29:37 (10584): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-06 01:29:37 (10584): Guest Log: CPUID EDX: 0x178bfbff
2025-05-06 01:29:37 (10584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-06 01:29:37 (10584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-06 01:29:37 (10584): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-06 01:29:37 (10584): Detected: Web Application Enabled (http://localhost:62763)
2025-05-06 01:29:37 (10584): Preference change detected
2025-05-06 01:29:37 (10584): Setting CPU throttle for VM. (80%)
2025-05-06 01:29:38 (10584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-06 01:29:39 (10584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-06 01:29:39 (10584): Guest Log: BIOS: Booting from Hard Disk...
2025-05-06 01:29:42 (10584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-06 01:29:42 (10584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-06 01:29:42 (10584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-06 01:29:49 (10584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-06 01:29:49 (10584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-06 01:29:53 (10584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000100 main     Log opened 2025-05-06T01:29:51.547076000Z
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000159 main     OS Product: Linux
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000210 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000236 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000277 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000278 main     Process ID: 1364
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000278 main     Package type: LINUX_64BITS_GENERIC
2025-05-06 01:29:53 (10584): Guest Log: 00:00:00.000884 main     5.2.32 r132073 started. Verbose level = 0
2025-05-06 01:29:53 (10584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-06 01:29:53 (10584): Guest Log: [INFO] Mounting shared directory
2025-05-06 01:29:53 (10584): Guest Log: [INFO] Checking for init_data.xml
2025-05-06 01:29:58 (10584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-06 01:29:58 (10584): Guest Log: [INFO] Detected branch: prod
2025-05-06 01:29:58 (10584): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-06 01:29:58 (10584): Guest Log: Copying input files
2025-05-06 01:29:59 (10584): Guest Log: Copied input files into RunAtlas.
2025-05-06 01:29:59 (10584): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-06 01:29:59 (10584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-06 01:29:59 (10584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-06 01:29:59 (10584): Guest Log: Further information can be found at the LHC@home message board.
2025-05-06 01:30:03 (10584): Guest Log: 00:00:10.002719 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 347 148 000ns (GuestNow=1 746 513 002 896 412 000 ns GuestLast=1 746 494 991 549 264 000 ns fSetTimeLastLoop=true )
2025-05-06 01:30:09 (10584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-06 01:30:09 (10584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-06 01:30:09 (10584): Guest Log: 2.6.3.0 1644 0 30152 145665 3 1 3117345 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-06 01:30:09 (10584): Guest Log: copied the webapp to /var/www
2025-05-06 01:30:09 (10584): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-06 01:30:09 (10584): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-06 01:30:10 (10584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-06 01:30:10 (10584): Guest Log:  *** Starting ATLAS job. (PandaID=6634479017 taskID=44506063) ***
2025-05-06 02:41:09 (10584): Guest Log:  *** Job finished ***
2025-05-06 02:41:09 (10584): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:40:59,593 | INFO     | [payload] execute_payloads thread has finished
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:40:59,737 | INFO     | [job] control thread has finished
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:01,263 | INFO     | [data] queue_monitor thread has finished
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:01,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633520375616)>', '<ExcThread(monitor, started 139632935167744)>']
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:02,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:02,187 | INFO     | [monitor] control thread has ended
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,449 | INFO     | all workflow threads have been joined
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,449 | INFO     | end of generic workflow (traces error code: 0)
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,450 | INFO     | traces error code: 0
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,506 [wrapper] ==== pilot stdout END ====
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,510 [wrapper] ==== wrapper stdout RESUME ====
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,513 [wrapper] pilotpid: 6007
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:06,516 [wrapper] Pilot exit status: 0
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:07,247 [wrapper] pandaids: 6634479017
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:07,275 [wrapper] cleanup supervisor_pilot 31639 6008
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:07,278 [wrapper] Test setup, not cleaning
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:07,283 [wrapper] apfmon messages muted
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:07,286 [wrapper] ==== wrapper stdout END ====
2025-05-06 02:41:09 (10584): Guest Log: 2025-05-06 07:41:07,289 [wrapper] ==== wrapper stderr END ====
2025-05-06 02:41:09 (10584): Guest Log:  *** Error codes and diagnostics ***
2025-05-06 02:41:09 (10584): Guest Log:     "exeErrorCode": 0,
2025-05-06 02:41:09 (10584): Guest Log:     "exeErrorDiag": "",
2025-05-06 02:41:09 (10584): Guest Log:     "pilotErrorCode": 0,
2025-05-06 02:41:09 (10584): Guest Log:     "pilotErrorDiag": "",
2025-05-06 02:41:09 (10584): Guest Log:  *** Listing of results directory ***
2025-05-06 02:41:09 (10584): Guest Log: total 201000
2025-05-06 02:41:09 (10584): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  5 23:00 pilot3.tar.gz
2025-05-06 02:41:09 (10584): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  5 23:09 queuedata.json
2025-05-06 02:41:09 (10584): Guest Log: -rwx------. 1 atlas atlas     37140 May  5 23:09 runpilot2-wrapper.sh
2025-05-06 02:41:09 (10584): Guest Log: -rwxr-xr-x. 1 atlas atlas      9165 May  6 06:29 init_data.xml
2025-05-06 02:41:09 (10584): Guest Log: -rwxr-xr-x. 1 atlas atlas    508882 May  6 06:29 input.tar.gz
2025-05-06 02:41:09 (10584): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  6 06:29 start_atlas.sh
2025-05-06 02:41:09 (10584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  6 06:29 EVNT.44506061._000664.pool.root.1 -> /data/./ATLAS.root_0
2025-05-06 02:41:09 (10584): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May  6 06:30 pandaJob.out
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas       424 May  6 06:30 setup.sh.local
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas    997355 May  6 06:31 agis_schedconf.cvmfs.json
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas   1596741 May  6 06:31 agis_ddmendpoints.agis.ALL.json
2025-05-06 02:41:09 (10584): Guest Log: drwx------. 4 atlas atlas      4096 May  6 06:31 pilot3
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas 200704186 May  6 07:40 HITS.44506063._016572.pool.root.1
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas      1033 May  6 07:40 memory_monitor_summary.json
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas    293353 May  6 07:40 log.44506063._016572.job.log.tgz.1
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas        95 May  6 07:40 pilot_heartbeat.json
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas      7726 May  6 07:40 heartbeat.json
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas      4722 May  6 07:41 pilotlog.txt
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas    378335 May  6 07:41 log.44506063._016572.job.log.1
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas       357 May  6 07:41 output.list
2025-05-06 02:41:09 (10584): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  6 07:41 runtime_log
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas    686080 May  6 07:41 result.tar.gz
2025-05-06 02:41:09 (10584): Guest Log: -rw-r--r--. 1 atlas atlas     10962 May  6 07:41 runtime_log.err
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas       661 May  6 07:41 c1FNDmZ7JW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmMVGLDmh1LE6n.diag
2025-05-06 02:41:09 (10584): Guest Log: Looking for outputfile HITS.44506063._016572.pool.root.1
2025-05-06 02:41:09 (10584): Guest Log: HITS file was successfully produced
2025-05-06 02:41:09 (10584): Guest Log: -rw-------. 1 atlas atlas 200704186 May  6 07:40 /home/atlas/RunAtlas/HITS.44506063._016572.pool.root.1
2025-05-06 02:41:09 (10584): Guest Log: Successfully finished the ATLAS job!
2025-05-06 02:41:09 (10584): Guest Log: Copying the results back to the shared directory!
2025-05-06 02:41:09 (10584): Guest Log:  *** Contents of shared directory: ***
2025-05-06 02:41:09 (10584): Guest Log: total 415600
2025-05-06 02:41:09 (10584): Guest Log: -rwxrwxrwx. 1 root root 223630128 May  6 06:29 ATLAS.root_0
2025-05-06 02:41:09 (10584): Guest Log: -rwxrwxrwx. 1 root root 200704186 May  6 07:41 HITS.pool.root.1
2025-05-06 02:41:09 (10584): Guest Log: -rwxrwxrwx. 1 root root      9165 May  6 06:29 init_data.xml
2025-05-06 02:41:09 (10584): Guest Log: -rwxrwxrwx. 1 root root    508882 May  6 06:22 input.tar.gz
2025-05-06 02:41:09 (10584): Guest Log: -rwxrwxrwx. 1 root root    686080 May  6 07:41 result.tar.gz
2025-05-06 02:41:09 (10584): Guest Log: -rwxrwxrwx. 1 root root     17569 May  6 06:22 start_atlas.sh
2025-05-06 02:41:09 (10584): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-06 02:41:09 (10584): VM Completion File Detected.
2025-05-06 02:41:09 (10584): Powering off VM.
2025-05-06 02:41:10 (10584): Successfully stopped VM.
2025-05-06 02:41:10 (10584): Deregistering VM. (boinc_081a949525861946, slot#2)
2025-05-06 02:41:10 (10584): Removing network bandwidth throttle group from VM.
2025-05-06 02:41:10 (10584): Removing VM from VirtualBox.
02:41:16 (10584): called boinc_finish(0)

</stderr_txt>
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