Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:23:55 (3800183): wrapper (7.7.26015): starting
20:23:55 (3800183): wrapper: running run_atlas (--nthreads 12)
[2025-05-06 20:23:55] Arguments: --nthreads 12
[2025-05-06 20:23:55] Threads: 12
[2025-05-06 20:23:55] Checking for CVMFS
[2025-05-06 20:23:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-06 20:23:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-06 20:23:55] Running cvmfs_config stat atlas.cern.ch
[2025-05-06 20:23:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-06 20:23:55] 2.12.7.0 19576 19477 122476 145685 0 56 37117592 46080000 878 130560 0 26931216 99.995 3754758 14802 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-05-06 20:23:55] CVMFS is ok
[2025-05-06 20:23:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-06 20:23:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-06 20:23:55] Further information can be found at the LHC@home message board.
[2025-05-06 20:23:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-06 20:23:55] Checking for apptainer binary...
[2025-05-06 20:23:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-06 20:23:55] Running /usr/bin/apptainer --version
[2025-05-06 20:23:55] apptainer version 1.4.0-1.el9
[2025-05-06 20:23:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-06 20:23:55] gpu01.farm.particle.cz
[2025-05-06 20:23:55] apptainer works
[2025-05-06 20:23:55] Set ATHENA_PROC_NUMBER=12
[2025-05-06 20:23:55] Set ATHENA_CORE_NUMBER=12
[2025-05-06 20:23:55] Starting ATLAS job with PandaID=6634476460
[2025-05-06 20:23:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 21:16:42]  *** The last 200 lines of the pilot log: ***
[2025-05-06 21:16:42]  guid=942b2b00-5ebf-4d1d-9cc4-de7013c23e97
[2025-05-06 21:16:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-06 21:16:42]  is_altstaged=None
[2025-05-06 21:16:42]  is_tar=False
[2025-05-06 21:16:42]  lfn=log.44506063._014976.job.log.tgz.1
[2025-05-06 21:16:42]  mtime=0
[2025-05-06 21:16:42]  protocol_id=None
[2025-05-06 21:16:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-06 21:16:42]  replicas=None
[2025-05-06 21:16:42]  scope=mc23_13p6TeV
[2025-05-06 21:16:42]  status=None
[2025-05-06 21:16:42]  status_code=0
[2025-05-06 21:16:42]  storage_token=
[2025-05-06 21:16:42]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6634476460/log.44506063._014976.job.log.tgz.1
[2025-05-06 21:16:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/67/log.44506063._014976.job.log.tgz.1
[2025-05-06 21:16:42]  workdir=None
[2025-05-06 21:16:42] ]
[2025-05-06 21:16:42] 2025-05-06 19:16:18,028 | INFO     | transferring file log.44506063._014976.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6634476460/log.44506063._014976.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-06 21:16:42] 2025-05-06 19:16:18,028 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6634476460/log.44506063._014976.job.log.tgz.1 /var/lib/boinc/slots/1/log.44506063._014976.job
[2025-05-06 21:16:42] 2025-05-06 19:16:18,042 | INFO     | adding to output.list: log.44506063._014976.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/67/log.44506063._014976.job.log.tg
[2025-05-06 21:16:42] 2025-05-06 19:16:18,043 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-06 21:16:42] 2025-05-06 19:16:18,043 | INFO     | summary of transferred files:
[2025-05-06 21:16:42] 2025-05-06 19:16:18,043 | INFO     |  -- lfn=log.44506063._014976.job.log.tgz.1, status_code=0, status=transferred
[2025-05-06 21:16:42] 2025-05-06 19:16:18,043 | INFO     | stage-out finished correctly
[2025-05-06 21:16:42] 2025-05-06 19:16:18,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-06 21:16:42] 2025-05-06 19:16:19,053 | INFO     | monitor loop #241: job 0:6634476460 is in state 'finished'
[2025-05-06 21:16:42] 2025-05-06 19:16:19,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 21:16:42] 2025-05-06 19:16:21,123 | INFO     | job 6634476460 has state=finished
[2025-05-06 21:16:42] 2025-05-06 19:16:21,123 | INFO     | preparing for final server update for job 6634476460 in state='finished'
[2025-05-06 21:16:42] 2025-05-06 19:16:21,124 | INFO     | this job has now completed (state=finished)
[2025-05-06 21:16:42] 2025-05-06 19:16:21,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-06 21:16:42] 2025-05-06 19:16:21,124 | INFO     | log transfer has been attempted: DONE
[2025-05-06 21:16:42] 2025-05-06 19:16:21,124 | INFO     | job 6634476460 has finished - writing final server update
[2025-05-06 21:16:42] 2025-05-06 19:16:21,124 | INFO     | total number of processed events: 400 (read)
[2025-05-06 21:16:42] 2025-05-06 19:16:21,126 | INFO     | executing command: lscpu
[2025-05-06 21:16:42] 2025-05-06 19:16:21,156 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-06 21:16:42] 2025-05-06 19:16:21,556 | INFO     | monitor loop #242: job 0:6634476460 is in state 'finished'
[2025-05-06 21:16:42] 2025-05-06 19:16:21,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 21:16:42] 2025-05-06 19:16:23,873 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-06 21:16:42] 2025-05-06 19:16:23,874 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6634476460/memory_monitor_summary.json (trf name=prmon)
[2025-05-06 21:16:42] 2025-05-06 19:16:23,875 | INFO     | extracted standard info from prmon json
[2025-05-06 21:16:42] 2025-05-06 19:16:23,875 | INFO     | extracted standard memory fields from prmon json
[2025-05-06 21:16:42] 2025-05-06 19:16:23,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-06 21:16:42] 2025-05-06 19:16:23,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-06 21:16:42] 2025-05-06 19:16:23,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-06 21:16:42] 2025-05-06 19:16:23,876 | INFO     | fitting pss+swap vs Time
[2025-05-06 21:16:42] 2025-05-06 19:16:23,876 | INFO     | sum of square deviations: 28242390.0
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | sum of deviations: 10366335486.0
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | mean x: 1746557509.0
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | mean y: 2821451.4444444445
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | -- intersect: -641069024234.6489
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | intersect: -641069024234.6489
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | chi2: 1.4258477836823356
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | -- intersect: -641069024234.6489
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | current memory leak: 367.05 B/s (using 45 data points, chi2=1.43)
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | ..............................
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | . Timing measurements:
[2025-05-06 21:16:42] 2025-05-06 19:16:23,877 | INFO     | . get job = 0 s
[2025-05-06 21:16:42] 2025-05-06 19:16:23,878 | INFO     | . initial setup = 2 s
[2025-05-06 21:16:42] 2025-05-06 19:16:23,878 | INFO     | . payload setup = 3 s
[2025-05-06 21:16:42] 2025-05-06 19:16:23,878 | INFO     | . stage-in = 0 s
[2025-05-06 21:16:42] 2025-05-06 19:16:23,878 | INFO     | . payload execution = 3115 s
[2025-05-06 21:16:42] 2025-05-06 19:16:23,878 | INFO     | . stage-out = 0 s
[2025-05-06 21:16:42] 2025-05-06 19:16:23,878 | INFO     | . log creation = 0 s
[2025-05-06 21:16:42] 2025-05-06 19:16:23,878 | INFO     | ..............................
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | 
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | job summary report
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | --------------------------------------------------
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | PanDA job id: 6634476460
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | task id: 44506063
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | errors: (none)
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | pilot state: finished 
[2025-05-06 21:16:42] 2025-05-06 19:16:24,393 | INFO     | transexitcode: 0
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | exeerrorcode: 0
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | exeerrordiag: 
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | exitcode: 0
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | exitmsg: OK
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | cpuconsumptiontime: 28309 s
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | nevents: 400
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | neventsw: 0
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | pid: 3810673
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | pgrp: 3810673
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | corecount: 12
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | event service: False
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | sizes: {0: 2393737, 3: 2393943, 11: 2393971, 3121: 2419421, 3122: 2428418, 3128: 2428532}
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | --------------------------------------------------
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | 
[2025-05-06 21:16:42] 2025-05-06 19:16:24,394 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | job 6634476460 has completed (purged errors)
[2025-05-06 21:16:42] 2025-05-06 19:16:24,410 | INFO     | overall cleanup function is called
[2025-05-06 21:16:42] 2025-05-06 19:16:25,417 | INFO     | --- collectZombieJob: --- 10, [3810673]
[2025-05-06 21:16:42] 2025-05-06 19:16:25,418 | INFO     | zombie collector waiting for pid 3810673
[2025-05-06 21:16:42] 2025-05-06 19:16:25,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 21:16:42] 2025-05-06 19:16:25,418 | INFO     | collected zombie processes
[2025-05-06 21:16:42] 2025-05-06 19:16:25,418 | INFO     | will attempt to kill all subprocesses of pid=3810673
[2025-05-06 21:16:42] 2025-05-06 19:16:25,506 | INFO     | process IDs to be killed: [3810673] (in reverse order)
[2025-05-06 21:16:42] 2025-05-06 19:16:25,545 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 21:16:42] 2025-05-06 19:16:25,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 21:16:42] 2025-05-06 19:16:25,548 | INFO     | did not find any defunct processes belonging to 3810673
[2025-05-06 21:16:42] 2025-05-06 19:16:25,551 | INFO     | did not find any defunct processes belonging to 3810673
[2025-05-06 21:16:42] 2025-05-06 19:16:25,551 | INFO     | ready for new job
[2025-05-06 21:16:42] 2025-05-06 19:16:25,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 21:16:42] 2025-05-06 19:16:25,552 | INFO     | **************************************
[2025-05-06 21:16:42] 2025-05-06 19:16:25,552 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 21:16:42] 2025-05-06 19:16:25,552 | INFO     | **************************************
[2025-05-06 21:16:42] 2025-05-06 19:16:25,552 | INFO     | 
[2025-05-06 21:16:42] 2025-05-06 19:16:25,553 | INFO     | architecture information:
[2025-05-06 21:16:42] 2025-05-06 19:16:25,553 | INFO     | executing command: cat /etc/os-release
[2025-05-06 21:16:42] 2025-05-06 19:16:25,564 | INFO     | cat /etc/os-release:
[2025-05-06 21:16:42] NAME="CentOS Linux"
[2025-05-06 21:16:42] VERSION="7 (Core)"
[2025-05-06 21:16:42] ID="centos"
[2025-05-06 21:16:42] ID_LIKE="rhel fedora"
[2025-05-06 21:16:42] VERSION_ID="7"
[2025-05-06 21:16:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 21:16:42] ANSI_COLOR="0;31"
[2025-05-06 21:16:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 21:16:42] HOME_URL="https://www.centos.org/"
[2025-05-06 21:16:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 21:16:42] 
[2025-05-06 21:16:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 21:16:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 21:16:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 21:16:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 21:16:42] 
[2025-05-06 21:16:42] 2025-05-06 19:16:25,564 | INFO     | **************************************
[2025-05-06 21:16:42] 2025-05-06 19:16:26,067 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-06 21:16:42] 2025-05-06 19:16:26,080 | INFO     | sufficient remaining disk space (72675753984 B)
[2025-05-06 21:16:42] 2025-05-06 19:16:26,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 21:16:42] 2025-05-06 19:16:26,080 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 21:16:42] 2025-05-06 19:16:26,080 | INFO     | update_server=False
[2025-05-06 21:16:42] 2025-05-06 19:16:26,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 21:16:42] 2025-05-06 19:16:26,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 21:16:42] 2025-05-06 19:16:26,200 | INFO     | all data control threads have been joined
[2025-05-06 21:16:42] 2025-05-06 19:16:26,562 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-06 21:16:42] 2025-05-06 19:16:26,563 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-06 21:16:42] 2025-05-06 19:16:26,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 21:16:42] 2025-05-06 19:16:26,563 | INFO     | will abort loop
[2025-05-06 21:16:42] 2025-05-06 19:16:26,972 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 21:16:42] 2025-05-06 19:16:26,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 21:16:42] 2025-05-06 19:16:26,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 21:16:42] 2025-05-06 19:16:27,085 | INFO     | [job] retrieve thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:27,205 | INFO     | [data] control thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:27,209 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:27,229 | INFO     | all payload control threads have been joined
[2025-05-06 21:16:42] 2025-05-06 19:16:27,436 | INFO     | all job control threads have been joined
[2025-05-06 21:16:42] 2025-05-06 19:16:27,568 | INFO     | [job] job monitor thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:27,593 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,110 | INFO     | [data] copytool_out thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,235 | INFO     | [payload] control thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,242 | INFO     | [payload] validate_post thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,336 | INFO     | [data] copytool_in thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,378 | INFO     | [payload] failed_post thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,441 | INFO     | [job] control thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,515 | INFO     | [job] validate thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,579 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:28,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 21:16:42] 2025-05-06 19:16:29,177 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 21:16:42] 2025-05-06 19:16:29,950 | INFO     | [job] queue monitor thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:33,182 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:36,153 | INFO     | job.realtimelogging is not enabled
[2025-05-06 21:16:42] 2025-05-06 19:16:37,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 21:16:42] 2025-05-06 19:16:37,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622854166336)>', '<ExcThread(monitor, started 139622499723008)>']
[2025-05-06 21:16:42] 2025-05-06 19:16:38,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 21:16:42] 2025-05-06 19:16:38,027 | INFO     | [monitor] control thread has ended
[2025-05-06 21:16:42] 2025-05-06 19:16:42,507 | INFO     | all workflow threads have been joined
[2025-05-06 21:16:42] 2025-05-06 19:16:42,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 21:16:42] 2025-05-06 19:16:42,507 | INFO     | traces error code: 0
[2025-05-06 21:16:42] 2025-05-06 19:16:42,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 21:16:42] 2025-05-06 19:16:42,570 [wrapper] ==== pilot stdout END ====
[2025-05-06 21:16:42] 2025-05-06 19:16:42,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 21:16:42] 2025-05-06 19:16:42,574 [wrapper] pilotpid: 3803975
[2025-05-06 21:16:42] 2025-05-06 19:16:42,576 [wrapper] Pilot exit status: 0
[2025-05-06 21:16:42] 2025-05-06 19:16:42,584 [wrapper] pandaids: 6634476460
[2025-05-06 21:16:42] 2025-05-06 19:16:42,609 [wrapper] cleanup supervisor_pilot 3864011 3803976
[2025-05-06 21:16:42] 2025-05-06 19:16:42,611 [wrapper] Test setup, not cleaning
[2025-05-06 21:16:42] 2025-05-06 19:16:42,613 [wrapper] apfmon messages muted
[2025-05-06 21:16:42] 2025-05-06 19:16:42,614 [wrapper] ==== wrapper stdout END ====
[2025-05-06 21:16:42] 2025-05-06 19:16:42,616 [wrapper] ==== wrapper stderr END ====
[2025-05-06 21:16:42]  *** Error codes and diagnostics ***
[2025-05-06 21:16:42]     "exeErrorCode": 0,
[2025-05-06 21:16:42]     "exeErrorDiag": "",
[2025-05-06 21:16:42]     "pilotErrorCode": 0,
[2025-05-06 21:16:42]     "pilotErrorDiag": "",
[2025-05-06 21:16:42]  *** Listing of results directory ***
[2025-05-06 21:16:42] total 415184
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc    495897 May  5 22:12 pilot3.tar.gz
[2025-05-06 21:16:42] -rwx------ 1 boinc boinc     37140 May  5 22:24 runpilot2-wrapper.sh
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc      5111 May  5 22:24 queuedata.json
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc       100 May  6 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 21:16:42] -rwxr-xr-x 1 boinc boinc      7986 May  6 20:23 run_atlas
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc       105 May  6 20:23 job.xml
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc      9434 May  6 20:23 init_data.xml
[2025-05-06 21:16:42] -rw-r--r-- 2 boinc boinc 222758769 May  6 20:23 EVNT.44506061._000600.pool.root.1
[2025-05-06 21:16:42] -rw-r--r-- 2 boinc boinc     17569 May  6 20:23 start_atlas.sh
[2025-05-06 21:16:42] drwxrwx--x 2 boinc boinc      4096 May  6 20:23 shared
[2025-05-06 21:16:42] -rw-r--r-- 2 boinc boinc    508873 May  6 20:23 input.tar.gz
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc         0 May  6 20:23 boinc_lockfile
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc      2557 May  6 20:23 pandaJob.out
[2025-05-06 21:16:42] -rw------- 1 boinc boinc       424 May  6 20:23 setup.sh.local
[2025-05-06 21:16:42] -rw------- 1 boinc boinc    998316 May  6 20:24 agis_schedconf.cvmfs.json
[2025-05-06 21:16:42] -rw------- 1 boinc boinc   1596741 May  6 20:24 agis_ddmendpoints.agis.ALL.json
[2025-05-06 21:16:42] drwx------ 4 boinc boinc      4096 May  6 20:24 pilot3
[2025-05-06 21:16:42] -rw------- 1 boinc boinc        95 May  6 21:15 pilot_heartbeat.json
[2025-05-06 21:16:42] -rw------- 1 boinc boinc 197157231 May  6 21:15 HITS.44506063._014976.pool.root.1
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc       529 May  6 21:15 boinc_task_state.xml
[2025-05-06 21:16:42] -rw------- 1 boinc boinc      1012 May  6 21:16 memory_monitor_summary.json
[2025-05-06 21:16:42] -rw------- 1 boinc boinc    353175 May  6 21:16 log.44506063._014976.job.log.tgz.1
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc        27 May  6 21:16 wrapper_checkpoint.txt
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc      8192 May  6 21:16 boinc_mmap_file
[2025-05-06 21:16:42] -rw------- 1 boinc boinc      7680 May  6 21:16 heartbeat.json
[2025-05-06 21:16:42] -rw------- 1 boinc boinc      4611 May  6 21:16 pilotlog.txt
[2025-05-06 21:16:42] -rw------- 1 boinc boinc    332226 May  6 21:16 log.44506063._014976.job.log.1
[2025-05-06 21:16:42] -rw------- 1 boinc boinc       357 May  6 21:16 output.list
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc       620 May  6 21:16 runtime_log
[2025-05-06 21:16:42] -rw------- 1 boinc boinc    706560 May  6 21:16 result.tar.gz
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc     11050 May  6 21:16 runtime_log.err
[2025-05-06 21:16:42] -rw------- 1 boinc boinc       658 May  6 21:16 8AZLDmjXHW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm2MGLDmtmGIEo.diag
[2025-05-06 21:16:42] -rw-r--r-- 1 boinc boinc     21248 May  6 21:16 stderr.txt
[2025-05-06 21:16:42] HITS file was successfully produced:
[2025-05-06 21:16:42] -rw------- 1 boinc boinc 197157231 May  6 21:15 shared/HITS.pool.root.1
[2025-05-06 21:16:42]  *** Contents of shared directory: ***
[2025-05-06 21:16:42] total 411300
[2025-05-06 21:16:42] -rw-r--r-- 2 boinc boinc 222758769 May  6 20:23 ATLAS.root_0
[2025-05-06 21:16:42] -rw-r--r-- 2 boinc boinc     17569 May  6 20:23 start_atlas.sh
[2025-05-06 21:16:42] -rw-r--r-- 2 boinc boinc    508873 May  6 20:23 input.tar.gz
[2025-05-06 21:16:42] -rw------- 1 boinc boinc 197157231 May  6 21:15 HITS.pool.root.1
[2025-05-06 21:16:42] -rw------- 1 boinc boinc    706560 May  6 21:16 result.tar.gz
21:16:44 (3800183): run_atlas exited; CPU time 28330.098129
21:16:44 (3800183): called boinc_finish(0)

</stderr_txt>
]]>

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