Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-06 18:50:48 (11688): Detected: vboxwrapper 26206
2025-05-06 18:50:48 (11688): Detected: BOINC client v7.24.1
2025-05-06 18:50:49 (11688): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-05-06 18:50:50 (11688): Successfully copied 'init_data.xml' to the shared directory.
2025-05-06 18:50:50 (11688): Create VM. (boinc_86e3383524a7e481, slot#8)
2025-05-06 18:50:51 (11688): Setting Memory Size for VM. (4800MB)
2025-05-06 18:50:51 (11688): Setting CPU Count for VM. (8)
2025-05-06 18:50:51 (11688): Setting Chipset Options for VM.
2025-05-06 18:50:51 (11688): Setting Graphics Controller Options for VM.
2025-05-06 18:50:52 (11688): Setting Boot Options for VM.
2025-05-06 18:50:52 (11688): Setting Network Configuration for NAT.
2025-05-06 18:50:52 (11688): Enabling VM Network Access.
2025-05-06 18:50:52 (11688): Disabling USB Support for VM.
2025-05-06 18:50:53 (11688): Disabling COM Port Support for VM.
2025-05-06 18:50:53 (11688): Disabling LPT Port Support for VM.
2025-05-06 18:50:53 (11688): Disabling Audio Support for VM.
2025-05-06 18:50:53 (11688): Disabling Clipboard Support for VM.
2025-05-06 18:50:54 (11688): Disabling Drag and Drop Support for VM.
2025-05-06 18:50:54 (11688): Adding storage controller(s) to VM.
2025-05-06 18:50:54 (11688): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-06 18:50:57 (11688): Adding VirtualBox Guest Additions to VM.
2025-05-06 18:50:57 (11688): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-06 18:50:58 (11688): forwarding host port 61376 to guest port 80
2025-05-06 18:50:58 (11688): Enabling remote desktop for VM.
2025-05-06 18:50:58 (11688): Required extension pack not installed, remote desktop not enabled.
2025-05-06 18:50:58 (11688): Enabling shared directory for VM.
2025-05-06 18:50:59 (11688): Starting VM using VBoxManage interface. (boinc_86e3383524a7e481, slot#8)
2025-05-06 18:51:04 (11688): Successfully started VM. (PID = '11044')
2025-05-06 18:51:04 (11688): Reporting VM Process ID to BOINC.
2025-05-06 18:51:04 (11688): Guest Log: BIOS: VirtualBox 7.0.10
2025-05-06 18:51:04 (11688): Guest Log: CPUID EDX: 0x178bfbff
2025-05-06 18:51:04 (11688): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-06 18:51:04 (11688): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-06 18:51:04 (11688): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-06 18:51:04 (11688): Detected: Web Application Enabled (http://localhost:61376)
2025-05-06 18:51:04 (11688): Preference change detected
2025-05-06 18:51:04 (11688): Setting CPU throttle for VM. (100%)
2025-05-06 18:51:04 (11688): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-06 18:51:06 (11688): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-06 18:51:06 (11688): Guest Log: BIOS: Booting from Hard Disk...
2025-05-06 18:51:09 (11688): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-06 18:51:09 (11688): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-06 18:51:09 (11688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-06 18:51:14 (11688): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-06 18:51:14 (11688): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-06 18:51:20 (11688): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.000139 main     Log opened 2025-05-06T18:51:18.484928000Z
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.000209 main     OS Product: Linux
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.000237 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.000276 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.000298 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.000298 main     Process ID: 1362
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.000299 main     Package type: LINUX_64BITS_GENERIC
2025-05-06 18:51:20 (11688): Guest Log: 00:00:00.001700 main     5.2.32 r132073 started. Verbose level = 0
2025-05-06 18:51:20 (11688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-06 18:51:20 (11688): Guest Log: [INFO] Mounting shared directory
2025-05-06 18:51:20 (11688): Guest Log: [INFO] Checking for init_data.xml
2025-05-06 18:51:25 (11688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-06 18:51:25 (11688): Guest Log: [INFO] Detected branch: prod
2025-05-06 18:51:25 (11688): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-06 18:51:25 (11688): Guest Log: Copying input files
2025-05-06 18:51:26 (11688): Guest Log: Copied input files into RunAtlas.
2025-05-06 18:51:26 (11688): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-06 18:51:26 (11688): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-06 18:51:26 (11688): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-06 18:51:26 (11688): Guest Log: Further information can be found at the LHC@home message board.
2025-05-06 18:51:30 (11688): Guest Log: 00:00:10.011768 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 851 407 000ns (GuestNow=1 746 525 089 636 546 000 ns GuestLast=1 746 557 478 487 953 000 ns fSetTimeLastLoop=true )
2025-05-06 18:51:36 (11688): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-06 18:51:36 (11688): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-06 18:51:36 (11688): Guest Log: 2.6.3.0 1642 0 30164 145671 4 1 3117345 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-06 18:51:37 (11688): Guest Log: copied the webapp to /var/www
2025-05-06 18:51:37 (11688): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-06 18:51:37 (11688): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-06 18:51:37 (11688): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-06 18:51:37 (11688): Guest Log:  *** Starting ATLAS job. (PandaID=6634475751 taskID=44506063) ***
2025-05-06 20:32:01 (11688): Status Report: Elapsed Time: '6000.000000'
2025-05-06 20:32:01 (11688): Status Report: CPU Time: '38586.859375'
2025-05-06 21:36:52 (11688): Guest Log:  *** Job finished ***
2025-05-06 21:36:52 (11688): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:39,871 | INFO     | [data] queue_monitor thread has finished
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:42,301 | INFO     | job.realtimelogging is not enabled
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:43,304 | INFO     | [payload] run_realtimelog thread has finished
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:43,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002855929664)>', '<ExcThread(monitor, started 140002411394816)>']
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:44,296 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:44,296 | INFO     | [monitor] control thread has ended
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,554 | INFO     | all workflow threads have been joined
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,554 | INFO     | end of generic workflow (traces error code: 0)
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,554 | INFO     | traces error code: 0
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,635 [wrapper] ==== pilot stdout END ====
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,639 [wrapper] ==== wrapper stdout RESUME ====
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,643 [wrapper] pilotpid: 6018
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,647 [wrapper] Pilot exit status: 0
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,775 [wrapper] pandaids: 6634475751
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,805 [wrapper] cleanup supervisor_pilot  6266 6019
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,816 [wrapper] Test setup, not cleaning
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,823 [wrapper] apfmon messages muted
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,827 [wrapper] ==== wrapper stdout END ====
2025-05-06 21:36:52 (11688): Guest Log: 2025-05-06 12:36:48,831 [wrapper] ==== wrapper stderr END ====
2025-05-06 21:36:52 (11688): Guest Log:  *** Error codes and diagnostics ***
2025-05-06 21:36:52 (11688): Guest Log:     "exeErrorCode": 0,
2025-05-06 21:36:52 (11688): Guest Log:     "exeErrorDiag": "",
2025-05-06 21:36:52 (11688): Guest Log:     "pilotErrorCode": 0,
2025-05-06 21:36:52 (11688): Guest Log:     "pilotErrorDiag": "",
2025-05-06 21:36:52 (11688): Guest Log:  *** Listing of results directory ***
2025-05-06 21:36:52 (11688): Guest Log: total 204480
2025-05-06 21:36:52 (11688): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  5 19:36 pilot3.tar.gz
2025-05-06 21:36:52 (11688): Guest Log: -rwx------. 1 atlas atlas     37140 May  5 19:57 runpilot2-wrapper.sh
2025-05-06 21:36:52 (11688): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  5 19:57 queuedata.json
2025-05-06 21:36:52 (11688): Guest Log: -rwxr-xr-x. 1 atlas atlas      6092 May  6 09:51 init_data.xml
2025-05-06 21:36:52 (11688): Guest Log: -rwxr-xr-x. 1 atlas atlas    508874 May  6 09:51 input.tar.gz
2025-05-06 21:36:52 (11688): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May  6 09:51 start_atlas.sh
2025-05-06 21:36:52 (11688): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  6 09:51 EVNT.44506061._000589.pool.root.1 -> /data/./ATLAS.root_0
2025-05-06 21:36:52 (11688): Guest Log: -rw-r--r--. 1 atlas atlas      2556 May  6 09:51 pandaJob.out
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas       424 May  6 09:51 setup.sh.local
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas    998300 May  6 09:54 agis_schedconf.cvmfs.json
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas   1596741 May  6 09:54 agis_ddmendpoints.agis.ALL.json
2025-05-06 21:36:52 (11688): Guest Log: drwx------. 4 atlas atlas      4096 May  6 09:54 pilot3
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas        95 May  6 12:35 pilot_heartbeat.json
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas 203313782 May  6 12:35 HITS.44506063._014696.pool.root.1
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas      1031 May  6 12:36 memory_monitor_summary.json
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas    341158 May  6 12:36 log.44506063._014696.job.log.tgz.1
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas      7722 May  6 12:36 heartbeat.json
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas      4608 May  6 12:36 pilotlog.txt
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas    808792 May  6 12:36 log.44506063._014696.job.log.1
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas       357 May  6 12:36 output.list
2025-05-06 21:36:52 (11688): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  6 12:36 runtime_log
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas   1167360 May  6 12:36 result.tar.gz
2025-05-06 21:36:52 (11688): Guest Log: -rw-r--r--. 1 atlas atlas     10953 May  6 12:36 runtime_log.err
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas       659 May  6 12:36 0pONDmA7GW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmeLGLDmfXPRIm.diag
2025-05-06 21:36:52 (11688): Guest Log: Looking for outputfile HITS.44506063._014696.pool.root.1
2025-05-06 21:36:52 (11688): Guest Log: HITS file was successfully produced
2025-05-06 21:36:52 (11688): Guest Log: -rw-------. 1 atlas atlas 203313782 May  6 12:35 /home/atlas/RunAtlas/HITS.44506063._014696.pool.root.1
2025-05-06 21:36:52 (11688): Guest Log: Successfully finished the ATLAS job!
2025-05-06 21:36:52 (11688): Guest Log: Copying the results back to the shared directory!
2025-05-06 21:36:52 (11688): Guest Log:  *** Contents of shared directory: ***
2025-05-06 21:36:53 (11688): Guest Log: total 421864
2025-05-06 21:36:53 (11688): Guest Log: -rwxrwxrwx. 1 root root 226963160 May  6 09:50 ATLAS.root_0
2025-05-06 21:36:53 (11688): Guest Log: -rwxrwxrwx. 1 root root 203313782 May  6 12:36 HITS.pool.root.1
2025-05-06 21:36:53 (11688): Guest Log: -rwxrwxrwx. 1 root root      6092 May  6 09:50 init_data.xml
2025-05-06 21:36:53 (11688): Guest Log: -rwxrwxrwx. 1 root root    508874 May  6 03:11 input.tar.gz
2025-05-06 21:36:53 (11688): Guest Log: -rwxrwxrwx. 1 root root   1167360 May  6 12:36 result.tar.gz
2025-05-06 21:36:53 (11688): Guest Log: -rwxrwxrwx. 1 root root     17569 May  6 03:11 start_atlas.sh
2025-05-06 21:36:53 (11688): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-06 21:36:53 (11688): VM Completion File Detected.
2025-05-06 21:36:53 (11688): Powering off VM.
2025-05-06 21:36:54 (11688): Successfully stopped VM.
2025-05-06 21:36:54 (11688): Deregistering VM. (boinc_86e3383524a7e481, slot#8)
2025-05-06 21:36:54 (11688): Removing network bandwidth throttle group from VM.
2025-05-06 21:36:54 (11688): Removing VM from VirtualBox.
21:36:59 (11688): called boinc_finish(0)

</stderr_txt>
]]>

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