Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:11 (3493995): wrapper (7.7.26015): starting
12:17:11 (3493995): wrapper: running run_atlas (--nthreads 12)
[2025-05-06 12:17:11] Arguments: --nthreads 12
[2025-05-06 12:17:11] Threads: 12
[2025-05-06 12:17:11] Checking for CVMFS
[2025-05-06 12:17:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-06 12:17:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-06 12:17:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-06 12:17:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-06 12:17:12] 2.12.7.0 8982 10631 238736 145673 3 336 33142791 46080001 25610 130560 133 276793368 99.943 56170198 1827 http://cvmfs-stratum-one.ihep.ac.cn:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-05-06 12:17:12] CVMFS is ok
[2025-05-06 12:17:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-06 12:17:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-06 12:17:12] Further information can be found at the LHC@home message board.
[2025-05-06 12:17:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-06 12:17:12] Checking for apptainer binary...
[2025-05-06 12:17:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-06 12:17:12] Running /usr/bin/apptainer --version
[2025-05-06 12:17:12] apptainer version 1.4.0-1.el9
[2025-05-06 12:17:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-06 12:17:12] mff2103.farm.particle.cz
[2025-05-06 12:17:12] apptainer works
[2025-05-06 12:17:12] Set ATHENA_PROC_NUMBER=12
[2025-05-06 12:17:12] Set ATHENA_CORE_NUMBER=12
[2025-05-06 12:17:12] Starting ATLAS job with PandaID=6634335284
[2025-05-06 12:17:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 13:48:15]  *** The last 200 lines of the pilot log: ***
[2025-05-06 13:48:15]  mtime=0
[2025-05-06 13:48:15]  protocol_id=None
[2025-05-06 13:48:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-06 13:48:15]  replicas=None
[2025-05-06 13:48:15]  scope=mc23_13p6TeV
[2025-05-06 13:48:15]  status=None
[2025-05-06 13:48:15]  status_code=0
[2025-05-06 13:48:15]  storage_token=
[2025-05-06 13:48:15]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-6634335284/log.44506063._012548.job.log.tgz.1
[2025-05-06 13:48:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/eb/log.44506063._012548.job.log.tgz.1
[2025-05-06 13:48:15]  workdir=None
[2025-05-06 13:48:15] ]
[2025-05-06 13:48:15] 2025-05-06 11:44:04,808 | INFO     | transferring file log.44506063._012548.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-6634335284/log.44506063._012548.job.log.tgz.1 to /scratch/.boinc/slot
[2025-05-06 13:48:15] 2025-05-06 11:44:04,808 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-6634335284/log.44506063._012548.job.log.tgz.1 /scratch/.boinc/slots/0/log.44506063._012548.j
[2025-05-06 13:48:15] 2025-05-06 11:44:04,823 | INFO     | adding to output.list: log.44506063._012548.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/eb/log.44506063._012548.job.log.tg
[2025-05-06 13:48:15] 2025-05-06 11:44:04,823 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-06 13:48:15] 2025-05-06 11:44:04,824 | INFO     | summary of transferred files:
[2025-05-06 13:48:15] 2025-05-06 11:44:04,824 | INFO     |  -- lfn=log.44506063._012548.job.log.tgz.1, status_code=0, status=transferred
[2025-05-06 13:48:15] 2025-05-06 11:44:04,824 | INFO     | stage-out finished correctly
[2025-05-06 13:48:15] 2025-05-06 11:44:06,208 | INFO     | monitor loop #354: job 0:6634335284 is in state 'finished'
[2025-05-06 13:48:15] 2025-05-06 11:44:06,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 13:48:15] 2025-05-06 11:44:08,073 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-06 13:48:15] 2025-05-06 11:44:08,711 | INFO     | monitor loop #355: job 0:6634335284 is in state 'finished'
[2025-05-06 13:48:15] 2025-05-06 11:44:08,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 13:48:15] 2025-05-06 11:44:10,670 | INFO     | job 6634335284 has state=finished
[2025-05-06 13:48:15] 2025-05-06 11:44:10,670 | INFO     | preparing for final server update for job 6634335284 in state='finished'
[2025-05-06 13:48:15] 2025-05-06 11:44:10,671 | INFO     | this job has now completed (state=finished)
[2025-05-06 13:48:15] 2025-05-06 11:44:10,671 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-06 13:48:15] 2025-05-06 11:44:10,671 | INFO     | log transfer has been attempted: DONE
[2025-05-06 13:48:15] 2025-05-06 11:44:10,671 | INFO     | job 6634335284 has finished - writing final server update
[2025-05-06 13:48:15] 2025-05-06 11:44:10,671 | INFO     | total number of processed events: 400 (read)
[2025-05-06 13:48:15] 2025-05-06 11:44:10,676 | INFO     | executing command: lscpu
[2025-05-06 13:48:15] 2025-05-06 11:44:10,738 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-06 13:48:15] 2025-05-06 11:44:11,214 | INFO     | monitor loop #356: job 0:6634335284 is in state 'finished'
[2025-05-06 13:48:15] 2025-05-06 11:44:11,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 13:48:15] 2025-05-06 11:44:12,456 | INFO     | PID=3501609 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-06 13:48:15] 2025-05-06 11:44:12,457 | INFO     | .. there are 30 such processes running
[2025-05-06 13:48:15] 2025-05-06 11:44:13,717 | INFO     | monitor loop #357: job 0:6634335284 is in state 'finished'
[2025-05-06 13:48:15] 2025-05-06 11:44:13,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 13:48:15] 2025-05-06 11:44:14,486 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-06 13:48:15] 2025-05-06 11:44:14,486 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6634335284/memory_monitor_summary.json (trf name=prmon)
[2025-05-06 13:48:15] 2025-05-06 11:44:14,487 | INFO     | extracted standard info from prmon json
[2025-05-06 13:48:15] 2025-05-06 11:44:14,487 | INFO     | extracted standard memory fields from prmon json
[2025-05-06 13:48:15] 2025-05-06 11:44:14,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-06 13:48:15] 2025-05-06 11:44:14,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-06 13:48:15] 2025-05-06 11:44:14,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | fitting pss+swap vs Time
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | sum of square deviations: 147126479.5
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | sum of deviations: 19628516651.5
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | mean x: 1746529320.5
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | mean y: 2606707.3205128205
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | -- intersect: -233006298054.56653
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | intersect: -233006298054.56653
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | chi2: 1.8594533795270456
[2025-05-06 13:48:15] 2025-05-06 11:44:14,489 | INFO     | -- intersect: -233006298054.56653
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | current memory leak: 133.41 B/s (using 78 data points, chi2=1.86)
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | ..............................
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . Timing measurements:
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . get job = 0 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . initial setup = 1 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . payload setup = 5 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . stage-in = 0 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . payload execution = 5178 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . stage-out = 0 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | . log creation = 0 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,490 | INFO     | ..............................
[2025-05-06 13:48:15] 2025-05-06 11:44:14,558 | INFO     | 
[2025-05-06 13:48:15] 2025-05-06 11:44:14,558 | INFO     | job summary report
[2025-05-06 13:48:15] 2025-05-06 11:44:14,558 | INFO     | --------------------------------------------------
[2025-05-06 13:48:15] 2025-05-06 11:44:14,558 | INFO     | PanDA job id: 6634335284
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | task id: 44506063
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | errors: (none)
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | pilot state: finished 
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | transexitcode: 0
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | exeerrorcode: 0
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | exeerrordiag: 
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | exitcode: 0
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | exitmsg: OK
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | cpuconsumptiontime: 40684 s
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | nevents: 400
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | neventsw: 0
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | pid: 3519182
[2025-05-06 13:48:15] 2025-05-06 11:44:14,559 | INFO     | pgrp: 3519182
[2025-05-06 13:48:15] 2025-05-06 11:44:14,560 | INFO     | corecount: 12
[2025-05-06 13:48:15] 2025-05-06 11:44:14,560 | INFO     | event service: False
[2025-05-06 13:48:15] 2025-05-06 11:44:14,560 | INFO     | sizes: {0: 2393738, 4: 2393944, 11: 2393972, 5187: 2420510, 5188: 2420509, 5189: 2429508, 5192: 2429692, 5199: 2429862}
[2025-05-06 13:48:15] 2025-05-06 11:44:14,560 | INFO     | --------------------------------------------------
[2025-05-06 13:48:15] 2025-05-06 11:44:14,560 | INFO     | 
[2025-05-06 13:48:15] 2025-05-06 11:44:14,560 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-05-06 13:48:15] 2025-05-06 11:44:14,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | job 6634335284 has completed (purged errors)
[2025-05-06 13:48:15] 2025-05-06 11:44:14,579 | INFO     | overall cleanup function is called
[2025-05-06 13:48:15] 2025-05-06 11:44:15,588 | INFO     | --- collectZombieJob: --- 10, [3519182]
[2025-05-06 13:48:15] 2025-05-06 11:44:15,588 | INFO     | zombie collector waiting for pid 3519182
[2025-05-06 13:48:15] 2025-05-06 11:44:15,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 13:48:15] 2025-05-06 11:44:15,588 | INFO     | collected zombie processes
[2025-05-06 13:48:15] 2025-05-06 11:44:15,588 | INFO     | will attempt to kill all subprocesses of pid=3519182
[2025-05-06 13:48:15] 2025-05-06 11:44:15,984 | INFO     | process IDs to be killed: [3519182] (in reverse order)
[2025-05-06 13:48:15] 2025-05-06 11:44:16,095 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 13:48:15] 2025-05-06 11:44:16,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 13:48:15] 2025-05-06 11:44:16,113 | INFO     | did not find any defunct processes belonging to 3519182
[2025-05-06 13:48:15] 2025-05-06 11:44:16,124 | INFO     | did not find any defunct processes belonging to 3519182
[2025-05-06 13:48:15] 2025-05-06 11:44:16,124 | INFO     | ready for new job
[2025-05-06 13:48:15] 2025-05-06 11:44:16,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 13:48:15] 2025-05-06 11:44:16,126 | INFO     | **************************************
[2025-05-06 13:48:15] 2025-05-06 11:44:16,126 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 13:48:15] 2025-05-06 11:44:16,126 | INFO     | **************************************
[2025-05-06 13:48:15] 2025-05-06 11:44:16,127 | INFO     | 
[2025-05-06 13:48:15] 2025-05-06 11:44:16,131 | INFO     | architecture information:
[2025-05-06 13:48:15] 2025-05-06 11:44:16,132 | INFO     | executing command: cat /etc/os-release
[2025-05-06 13:48:15] 2025-05-06 11:44:16,147 | INFO     | cat /etc/os-release:
[2025-05-06 13:48:15] NAME="CentOS Linux"
[2025-05-06 13:48:15] VERSION="7 (Core)"
[2025-05-06 13:48:15] ID="centos"
[2025-05-06 13:48:15] ID_LIKE="rhel fedora"
[2025-05-06 13:48:15] VERSION_ID="7"
[2025-05-06 13:48:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 13:48:15] ANSI_COLOR="0;31"
[2025-05-06 13:48:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 13:48:15] HOME_URL="https://www.centos.org/"
[2025-05-06 13:48:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 13:48:15] 
[2025-05-06 13:48:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 13:48:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 13:48:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 13:48:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 13:48:15] 
[2025-05-06 13:48:15] 2025-05-06 11:44:16,147 | INFO     | **************************************
[2025-05-06 13:48:15] 2025-05-06 11:44:16,650 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-05-06 13:48:15] 2025-05-06 11:44:16,670 | INFO     | sufficient remaining disk space (1491179929600 B)
[2025-05-06 13:48:15] 2025-05-06 11:44:16,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 13:48:15] 2025-05-06 11:44:16,671 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 13:48:15] 2025-05-06 11:44:16,671 | INFO     | update_server=False
[2025-05-06 13:48:15] 2025-05-06 11:44:16,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 13:48:15] 2025-05-06 11:44:16,672 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-06 13:48:15] 2025-05-06 11:44:16,672 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 13:48:15] 2025-05-06 11:44:16,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 13:48:15] 2025-05-06 11:44:16,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 13:48:15] 2025-05-06 11:44:17,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:48:15] 2025-05-06 11:44:17,225 | INFO     | aborting loop
[2025-05-06 13:48:15] 2025-05-06 11:44:17,357 | INFO     | all data control threads have been joined
[2025-05-06 13:48:15] 2025-05-06 11:44:17,676 | INFO     | [job] retrieve thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:17,819 | INFO     | all payload control threads have been joined
[2025-05-06 13:48:15] 2025-05-06 11:44:17,824 | INFO     | all job control threads have been joined
[2025-05-06 13:48:15] 2025-05-06 11:44:17,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 13:48:15] 2025-05-06 11:44:18,111 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,228 | INFO     | [job] job monitor thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,362 | INFO     | [data] control thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,423 | INFO     | [payload] failed_post thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,521 | INFO     | [data] copytool_in thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 13:48:15] 2025-05-06 11:44:18,824 | INFO     | [payload] control thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,829 | INFO     | [job] control thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,856 | INFO     | [job] validate thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:18,948 | INFO     | [payload] validate_post thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:19,077 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:19,172 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:19,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:48:15] 2025-05-06 11:44:19,906 | INFO     | [data] copytool_out thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:20,570 | INFO     | [job] queue monitor thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:22,648 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:26,822 | INFO     | job.realtimelogging is not enabled
[2025-05-06 13:48:15] 2025-05-06 11:44:27,828 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 13:48:15] 2025-05-06 11:44:28,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305080579904)>', '<ExcThread(monitor, started 140304736827136)>']
[2025-05-06 13:48:15] 2025-05-06 11:44:28,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 13:48:15] 2025-05-06 11:44:28,732 | INFO     | [monitor] control thread has ended
[2025-05-06 13:48:15] 2025-05-06 11:44:33,623 | INFO     | all workflow threads have been joined
[2025-05-06 13:48:15] 2025-05-06 11:44:33,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 13:48:15] 2025-05-06 11:44:33,625 | INFO     | traces error code: 0
[2025-05-06 13:48:15] 2025-05-06 11:44:33,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 13:48:15] 2025-05-06 11:44:33,717 [wrapper] ==== pilot stdout END ====
[2025-05-06 13:48:15] 2025-05-06 11:44:33,720 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 13:48:15] 2025-05-06 11:44:33,722 [wrapper] pilotpid: 3501609
[2025-05-06 13:48:15] 2025-05-06 11:44:33,724 [wrapper] Pilot exit status: 0
[2025-05-06 13:48:15] 2025-05-06 11:44:33,733 [wrapper] pandaids: 6634335284
[2025-05-06 13:48:15] 2025-05-06 11:44:33,813 [wrapper] cleanup supervisor_pilot  752482 3501610
[2025-05-06 13:48:15] 2025-05-06 11:44:33,815 [wrapper] Test setup, not cleaning
[2025-05-06 13:48:15] 2025-05-06 11:44:33,818 [wrapper] apfmon messages muted
[2025-05-06 13:48:15] 2025-05-06 11:44:33,820 [wrapper] ==== wrapper stdout END ====
[2025-05-06 13:48:15] 2025-05-06 11:44:33,822 [wrapper] ==== wrapper stderr END ====
[2025-05-06 13:48:15]  *** Error codes and diagnostics ***
[2025-05-06 13:48:15]     "exeErrorCode": 0,
[2025-05-06 13:48:15]     "exeErrorDiag": "",
[2025-05-06 13:48:15]     "pilotErrorCode": 0,
[2025-05-06 13:48:15]     "pilotErrorDiag": "",
[2025-05-06 13:48:15]  *** Listing of results directory ***
[2025-05-06 13:48:15] total 423336
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc    503527 Apr  3 09:42 pilot3.tar.gz
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc      5111 May  5 18:32 queuedata.json
[2025-05-06 13:48:15] -rwx------ 1 boinc boinc     37140 May  5 18:34 runpilot2-wrapper.sh
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc       100 May  6 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 13:48:15] -rwxr-xr-x 1 boinc boinc      7986 May  6 12:17 run_atlas
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc       105 May  6 12:17 job.xml
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc      6654 May  6 12:17 init_data.xml
[2025-05-06 13:48:15] -rw-r--r-- 2 boinc boinc 225171100 May  6 12:17 EVNT.44506061._000502.pool.root.1
[2025-05-06 13:48:15] drwxrwx--x 2 boinc boinc      4096 May  6 12:17 shared
[2025-05-06 13:48:15] -rw-r--r-- 2 boinc boinc    517094 May  6 12:17 input.tar.gz
[2025-05-06 13:48:15] -rw-r--r-- 2 boinc boinc     17569 May  6 12:17 start_atlas.sh
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc         0 May  6 12:17 boinc_lockfile
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc      2557 May  6 12:17 pandaJob.out
[2025-05-06 13:48:15] -rw------- 1 boinc boinc       424 May  6 12:17 setup.sh.local
[2025-05-06 13:48:15] -rw------- 1 boinc boinc    998324 May  6 12:17 agis_schedconf.cvmfs.json
[2025-05-06 13:48:15] -rw------- 1 boinc boinc   1596741 May  6 12:17 agis_ddmendpoints.agis.ALL.json
[2025-05-06 13:48:15] drwx------ 4 boinc boinc      4096 May  6 12:17 pilot3
[2025-05-06 13:48:15] -rw------- 1 boinc boinc 202720983 May  6 13:43 HITS.44506063._012548.pool.root.1
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc       530 May  6 13:43 boinc_task_state.xml
[2025-05-06 13:48:15] -rw------- 1 boinc boinc        95 May  6 13:43 pilot_heartbeat.json
[2025-05-06 13:48:15] -rw------- 1 boinc boinc      1029 May  6 13:43 memory_monitor_summary.json
[2025-05-06 13:48:15] -rw------- 1 boinc boinc    377008 May  6 13:44 log.44506063._012548.job.log.tgz.1
[2025-05-06 13:48:15] -rw------- 1 boinc boinc      7699 May  6 13:44 heartbeat.json
[2025-05-06 13:48:15] -rw------- 1 boinc boinc      4551 May  6 13:44 pilotlog.txt
[2025-05-06 13:48:15] -rw------- 1 boinc boinc    489528 May  6 13:44 log.44506063._012548.job.log.1
[2025-05-06 13:48:15] -rw------- 1 boinc boinc       357 May  6 13:44 output.list
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc       620 May  6 13:44 runtime_log
[2025-05-06 13:48:15] -rw------- 1 boinc boinc    890880 May  6 13:44 result.tar.gz
[2025-05-06 13:48:15] -rw------- 1 boinc boinc       663 May  6 13:44 yMVKDm9wDW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmV91LDmgF1WHm.diag
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc     11078 May  6 13:44 runtime_log.err
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc        27 May  6 13:48 wrapper_checkpoint.txt
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc      8192 May  6 13:48 boinc_mmap_file
[2025-05-06 13:48:15] -rw-r--r-- 1 boinc boinc     21769 May  6 13:48 stderr.txt
[2025-05-06 13:48:15] HITS file was successfully produced:
[2025-05-06 13:48:15] -rw------- 1 boinc boinc 202720983 May  6 13:43 shared/HITS.pool.root.1
[2025-05-06 13:48:15]  *** Contents of shared directory: ***
[2025-05-06 13:48:15] total 419276
[2025-05-06 13:48:15] -rw-r--r-- 2 boinc boinc 225171100 May  6 12:17 ATLAS.root_0
[2025-05-06 13:48:15] -rw-r--r-- 2 boinc boinc    517094 May  6 12:17 input.tar.gz
[2025-05-06 13:48:15] -rw-r--r-- 2 boinc boinc     17569 May  6 12:17 start_atlas.sh
[2025-05-06 13:48:15] -rw------- 1 boinc boinc 202720983 May  6 13:43 HITS.pool.root.1
[2025-05-06 13:48:15] -rw------- 1 boinc boinc    890880 May  6 13:44 result.tar.gz
13:48:17 (3493995): run_atlas exited; CPU time 40802.054895
13:48:17 (3493995): called boinc_finish(0)

</stderr_txt>
]]>

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