Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:42:32 (478423): wrapper (7.7.26015): starting
20:42:32 (478423): wrapper: running run_atlas (--nthreads 12)
[2025-05-05 20:42:32] Arguments: --nthreads 12
[2025-05-05 20:42:32] Threads: 12
[2025-05-05 20:42:32] Checking for CVMFS
[2025-05-05 20:42:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 20:42:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 20:42:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 20:42:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 20:42:33] 2.11.5.0 2604 8608 218204 145660 2 268 35174308 45568000 13384 130560 0 97633094 99.818 61362216 32745 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-05 20:42:33] CVMFS is ok
[2025-05-05 20:42:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-05 20:42:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-05 20:42:33] Further information can be found at the LHC@home message board.
[2025-05-05 20:42:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 20:42:33] Checking for apptainer binary...
[2025-05-05 20:42:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-05 20:42:33] Running /usr/bin/apptainer --version
[2025-05-05 20:42:33] apptainer version 1.4.0-1.el9
[2025-05-05 20:42:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 20:42:33] wns0053.triumf.lcg
[2025-05-05 20:42:33] apptainer works
[2025-05-05 20:42:33] Set ATHENA_PROC_NUMBER=12
[2025-05-05 20:42:33] Set ATHENA_CORE_NUMBER=12
[2025-05-05 20:42:33] Starting ATLAS job with PandaID=6634200042
[2025-05-05 20:42:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-05 21:41:56]  *** The last 200 lines of the pilot log: ***
[2025-05-05 21:41:56]  filesize=359070
[2025-05-05 21:41:56]  filetype=log
[2025-05-05 21:41:56]  guid=dc540ad3-e04f-479e-b58e-7520ea66728f
[2025-05-05 21:41:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-05 21:41:56]  is_altstaged=None
[2025-05-05 21:41:56]  is_tar=False
[2025-05-05 21:41:56]  lfn=log.44506063._008818.job.log.tgz.1
[2025-05-05 21:41:56]  mtime=0
[2025-05-05 21:41:56]  protocol_id=None
[2025-05-05 21:41:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-05 21:41:56]  replicas=None
[2025-05-05 21:41:56]  scope=mc23_13p6TeV
[2025-05-05 21:41:56]  status=None
[2025-05-05 21:41:56]  status_code=0
[2025-05-05 21:41:56]  storage_token=
[2025-05-05 21:41:56]  surl=/home/boinc/slots/0/PanDA_Pilot-6634200042/log.44506063._008818.job.log.tgz.1
[2025-05-05 21:41:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/2a/log.44506063._008818.job.log.tgz.1
[2025-05-05 21:41:56]  workdir=None
[2025-05-05 21:41:56] ]
[2025-05-05 21:41:56] 2025-05-06 04:41:38,463 | INFO     | transferring file log.44506063._008818.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6634200042/log.44506063._008818.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-05-05 21:41:56] 2025-05-06 04:41:38,463 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6634200042/log.44506063._008818.job.log.tgz.1 /home/boinc/slots/0/log.44506063._008818.job.log.t
[2025-05-05 21:41:56] 2025-05-06 04:41:38,476 | INFO     | adding to output.list: log.44506063._008818.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/2a/log.44506063._008818.job.log.tg
[2025-05-05 21:41:56] 2025-05-06 04:41:38,476 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-05 21:41:56] 2025-05-06 04:41:38,477 | INFO     | summary of transferred files:
[2025-05-05 21:41:56] 2025-05-06 04:41:38,477 | INFO     |  -- lfn=log.44506063._008818.job.log.tgz.1, status_code=0, status=transferred
[2025-05-05 21:41:56] 2025-05-06 04:41:38,477 | INFO     | stage-out finished correctly
[2025-05-05 21:41:56] 2025-05-06 04:41:38,530 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-05 21:41:56] 2025-05-06 04:41:39,525 | INFO     | monitor loop #266: job 0:6634200042 is in state 'finished'
[2025-05-05 21:41:56] 2025-05-06 04:41:39,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 21:41:56] 2025-05-06 04:41:40,186 | INFO     | job 6634200042 has state=finished
[2025-05-05 21:41:56] 2025-05-06 04:41:40,186 | INFO     | preparing for final server update for job 6634200042 in state='finished'
[2025-05-05 21:41:56] 2025-05-06 04:41:40,186 | INFO     | this job has now completed (state=finished)
[2025-05-05 21:41:56] 2025-05-06 04:41:40,186 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-05 21:41:56] 2025-05-06 04:41:40,187 | INFO     | log transfer has been attempted: DONE
[2025-05-05 21:41:56] 2025-05-06 04:41:40,187 | INFO     | job 6634200042 has finished - writing final server update
[2025-05-05 21:41:56] 2025-05-06 04:41:40,187 | INFO     | total number of processed events: 400 (read)
[2025-05-05 21:41:56] 2025-05-06 04:41:40,189 | INFO     | executing command: lscpu
[2025-05-05 21:41:56] 2025-05-06 04:41:40,224 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-05 21:41:56] 2025-05-06 04:41:42,028 | INFO     | monitor loop #267: job 0:6634200042 is in state 'finished'
[2025-05-05 21:41:56] 2025-05-06 04:41:42,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 21:41:56] 2025-05-06 04:41:42,927 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-05 21:41:56] 2025-05-06 04:41:42,927 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6634200042/memory_monitor_summary.json (trf name=prmon)
[2025-05-05 21:41:56] 2025-05-06 04:41:42,928 | INFO     | extracted standard info from prmon json
[2025-05-05 21:41:56] 2025-05-06 04:41:42,928 | INFO     | extracted standard memory fields from prmon json
[2025-05-05 21:41:56] 2025-05-06 04:41:42,928 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-05 21:41:56] 2025-05-06 04:41:42,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-05 21:41:56] 2025-05-06 04:41:42,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-05 21:41:56] 2025-05-06 04:41:42,929 | INFO     | fitting pss+swap vs Time
[2025-05-05 21:41:56] 2025-05-06 04:41:42,929 | INFO     | sum of square deviations: 41119002.98039215
[2025-05-05 21:41:56] 2025-05-06 04:41:42,929 | INFO     | sum of deviations: 10902310964.56864
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | mean x: 1746504811.0196078
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | mean y: 2669389.431372549
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | -- intersect: -463066402590.03125
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | intersect: -463066402590.03125
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | chi2: 1.9688020713998593
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | -- intersect: -463066402590.03125
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | current memory leak: 265.14 B/s (using 51 data points, chi2=1.97)
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | ..............................
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | . Timing measurements:
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | . get job = 0 s
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | . initial setup = 2 s
[2025-05-05 21:41:56] 2025-05-06 04:41:42,930 | INFO     | . payload setup = 3 s
[2025-05-05 21:41:56] 2025-05-06 04:41:42,931 | INFO     | . stage-in = 0 s
[2025-05-05 21:41:56] 2025-05-06 04:41:42,931 | INFO     | . payload execution = 3515 s
[2025-05-05 21:41:56] 2025-05-06 04:41:42,931 | INFO     | . stage-out = 0 s
[2025-05-05 21:41:56] 2025-05-06 04:41:42,931 | INFO     | . log creation = 0 s
[2025-05-05 21:41:56] 2025-05-06 04:41:42,931 | INFO     | ..............................
[2025-05-05 21:41:56] 2025-05-06 04:41:42,969 | INFO     | 3544s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | 
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | job summary report
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | --------------------------------------------------
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | PanDA job id: 6634200042
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | task id: 44506063
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | errors: (none)
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | pilot state: finished 
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | transexitcode: 0
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | exeerrorcode: 0
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | exeerrordiag: 
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | exitcode: 0
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | exitmsg: OK
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | cpuconsumptiontime: 27790 s
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | nevents: 400
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | neventsw: 0
[2025-05-05 21:41:56] 2025-05-06 04:41:43,368 | INFO     | pid: 492126
[2025-05-05 21:41:56] 2025-05-06 04:41:43,369 | INFO     | pgrp: 492126
[2025-05-05 21:41:56] 2025-05-06 04:41:43,369 | INFO     | corecount: 12
[2025-05-05 21:41:56] 2025-05-06 04:41:43,369 | INFO     | event service: False
[2025-05-05 21:41:56] 2025-05-06 04:41:43,369 | INFO     | sizes: {0: 2393679, 3: 2393885, 11: 2393913, 3522: 2419544, 3523: 2428479, 3524: 2428535, 3528: 2428833}
[2025-05-05 21:41:56] 2025-05-06 04:41:43,369 | INFO     | --------------------------------------------------
[2025-05-05 21:41:56] 2025-05-06 04:41:43,369 | INFO     | 
[2025-05-05 21:41:56] 2025-05-06 04:41:43,369 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-05 21:41:56] 2025-05-06 04:41:43,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,382 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-05 21:41:56] 2025-05-06 04:41:43,383 | INFO     | job 6634200042 has completed (purged errors)
[2025-05-05 21:41:56] 2025-05-06 04:41:43,383 | INFO     | overall cleanup function is called
[2025-05-05 21:41:56] 2025-05-06 04:41:44,390 | INFO     | --- collectZombieJob: --- 10, [492126]
[2025-05-05 21:41:56] 2025-05-06 04:41:44,390 | INFO     | zombie collector waiting for pid 492126
[2025-05-05 21:41:56] 2025-05-06 04:41:44,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-05 21:41:56] 2025-05-06 04:41:44,390 | INFO     | collected zombie processes
[2025-05-05 21:41:56] 2025-05-06 04:41:44,390 | INFO     | will attempt to kill all subprocesses of pid=492126
[2025-05-05 21:41:56] 2025-05-06 04:41:44,521 | INFO     | process IDs to be killed: [492126] (in reverse order)
[2025-05-05 21:41:56] 2025-05-06 04:41:44,571 | WARNING  | found no corresponding commands to process id(s)
[2025-05-05 21:41:56] 2025-05-06 04:41:44,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-05 21:41:56] 2025-05-06 04:41:44,577 | INFO     | did not find any defunct processes belonging to 492126
[2025-05-05 21:41:56] 2025-05-06 04:41:44,582 | INFO     | did not find any defunct processes belonging to 492126
[2025-05-05 21:41:56] 2025-05-06 04:41:44,582 | INFO     | ready for new job
[2025-05-05 21:41:56] 2025-05-06 04:41:44,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-05 21:41:56] 2025-05-06 04:41:44,583 | INFO     | **************************************
[2025-05-05 21:41:56] 2025-05-06 04:41:44,583 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-05 21:41:56] 2025-05-06 04:41:44,583 | INFO     | **************************************
[2025-05-05 21:41:56] 2025-05-06 04:41:44,584 | INFO     | 
[2025-05-05 21:41:56] 2025-05-06 04:41:44,585 | INFO     | architecture information:
[2025-05-05 21:41:56] 2025-05-06 04:41:44,585 | INFO     | executing command: cat /etc/os-release
[2025-05-05 21:41:56] 2025-05-06 04:41:44,595 | INFO     | cat /etc/os-release:
[2025-05-05 21:41:56] NAME="CentOS Linux"
[2025-05-05 21:41:56] VERSION="7 (Core)"
[2025-05-05 21:41:56] ID="centos"
[2025-05-05 21:41:56] ID_LIKE="rhel fedora"
[2025-05-05 21:41:56] VERSION_ID="7"
[2025-05-05 21:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-05 21:41:56] ANSI_COLOR="0;31"
[2025-05-05 21:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-05 21:41:56] HOME_URL="https://www.centos.org/"
[2025-05-05 21:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-05 21:41:56] 
[2025-05-05 21:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-05 21:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-05 21:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-05 21:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-05 21:41:56] 
[2025-05-05 21:41:56] 2025-05-06 04:41:44,595 | INFO     | **************************************
[2025-05-05 21:41:56] 2025-05-06 04:41:45,098 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-05 21:41:56] 2025-05-06 04:41:45,109 | INFO     | sufficient remaining disk space (1824635486208 B)
[2025-05-05 21:41:56] 2025-05-06 04:41:45,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-05 21:41:56] 2025-05-06 04:41:45,110 | INFO     | current server update state: UPDATING_FINAL
[2025-05-05 21:41:56] 2025-05-06 04:41:45,110 | INFO     | update_server=False
[2025-05-05 21:41:56] 2025-05-06 04:41:45,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-05 21:41:56] 2025-05-06 04:41:45,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-05 21:41:56] 2025-05-06 04:41:45,156 | INFO     | all job control threads have been joined
[2025-05-05 21:41:56] 2025-05-06 04:41:45,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-05 21:41:56] 2025-05-06 04:41:45,536 | INFO     | aborting loop
[2025-05-05 21:41:56] 2025-05-06 04:41:45,864 | INFO     | all payload control threads have been joined
[2025-05-05 21:41:56] 2025-05-06 04:41:45,867 | INFO     | all data control threads have been joined
[2025-05-05 21:41:56] 2025-05-06 04:41:45,991 | INFO     | found 0 job(s) in 20 queues
[2025-05-05 21:41:56] 2025-05-06 04:41:45,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-05 21:41:56] 2025-05-06 04:41:45,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-05 21:41:56] 2025-05-06 04:41:46,115 | INFO     | [job] retrieve thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:46,161 | INFO     | [job] control thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:46,288 | INFO     | [payload] failed_post thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:46,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-05 21:41:56] 2025-05-06 04:41:46,541 | INFO     | [job] job monitor thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:46,699 | INFO     | [payload] execute_payloads thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:46,869 | INFO     | [payload] control thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:46,872 | INFO     | [data] control thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:47,176 | INFO     | [data] copytool_in thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:47,177 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:47,286 | INFO     | [payload] validate_pre thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:47,292 | INFO     | [job] create_data_payload thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:47,314 | INFO     | [payload] validate_post thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:47,387 | INFO     | [job] validate thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:47,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-05 21:41:56] 2025-05-06 04:41:48,544 | INFO     | [data] copytool_out thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:49,001 | INFO     | [job] queue monitor thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:49,116 | INFO     | [data] queue_monitor thread has finished
[2025-05-05 21:41:56] 2025-05-06 04:41:50,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875700311872)>', '<ExcThread(monitor, started 139874720012032)>']
[2025-05-05 21:41:56] 2025-05-06 04:41:51,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-05 21:41:56] 2025-05-06 04:41:51,017 | INFO     | [monitor] control thread has ended
[2025-05-05 21:41:56] 2025-05-06 04:41:55,869 | INFO     | all workflow threads have been joined
[2025-05-05 21:41:56] 2025-05-06 04:41:55,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-05 21:41:56] 2025-05-06 04:41:55,869 | INFO     | traces error code: 0
[2025-05-05 21:41:56] 2025-05-06 04:41:55,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-05 21:41:56] 2025-05-06 04:41:55,966 [wrapper] ==== pilot stdout END ====
[2025-05-05 21:41:56] 2025-05-06 04:41:55,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-05 21:41:56] 2025-05-06 04:41:55,971 [wrapper] pilotpid: 482644
[2025-05-05 21:41:56] 2025-05-06 04:41:55,972 [wrapper] Pilot exit status: 0
[2025-05-05 21:41:56] 2025-05-06 04:41:55,979 [wrapper] pandaids: 6634200042
[2025-05-05 21:41:56] 2025-05-06 04:41:56,011 [wrapper] cleanup supervisor_pilot  782041 482645
[2025-05-05 21:41:56] 2025-05-06 04:41:56,013 [wrapper] Test setup, not cleaning
[2025-05-05 21:41:56] 2025-05-06 04:41:56,015 [wrapper] apfmon messages muted
[2025-05-05 21:41:56] 2025-05-06 04:41:56,016 [wrapper] ==== wrapper stdout END ====
[2025-05-05 21:41:56] 2025-05-06 04:41:56,018 [wrapper] ==== wrapper stderr END ====
[2025-05-05 21:41:56]  *** Error codes and diagnostics ***
[2025-05-05 21:41:56]     "exeErrorCode": 0,
[2025-05-05 21:41:56]     "exeErrorDiag": "",
[2025-05-05 21:41:56]     "pilotErrorCode": 0,
[2025-05-05 21:41:56]     "pilotErrorDiag": "",
[2025-05-05 21:41:56]  *** Listing of results directory ***
[2025-05-05 21:41:56] total 419800
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc    495897 May  5 04:24 pilot3.tar.gz
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc      5111 May  5 04:28 queuedata.json
[2025-05-05 21:41:56] -rwx------. 1 boinc boinc     37140 May  5 04:29 runpilot2-wrapper.sh
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc       100 May  5 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-05 21:41:56] -rwxr-xr-x. 1 boinc boinc      7986 May  5 20:42 run_atlas
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc       105 May  5 20:42 job.xml
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc      6601 May  5 20:42 init_data.xml
[2025-05-05 21:41:56] -rw-r--r--. 2 boinc boinc 224408856 May  5 20:42 EVNT.44506061._000353.pool.root.1
[2025-05-05 21:41:56] -rw-r--r--. 2 boinc boinc     17569 May  5 20:42 start_atlas.sh
[2025-05-05 21:41:56] drwxrwx--x. 2 boinc boinc      4096 May  5 20:42 shared
[2025-05-05 21:41:56] -rw-r--r--. 2 boinc boinc    508881 May  5 20:42 input.tar.gz
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc         0 May  5 20:42 boinc_lockfile
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc      2554 May  5 20:42 pandaJob.out
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc       424 May  5 20:42 setup.sh.local
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc    997387 May  5 20:42 agis_schedconf.cvmfs.json
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc   1596741 May  5 20:42 agis_ddmendpoints.agis.ALL.json
[2025-05-05 21:41:56] drwx------. 4 boinc boinc      4096 May  5 20:42 pilot3
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc       529 May  5 21:41 boinc_task_state.xml
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc 200181230 May  5 21:41 HITS.44506063._008818.pool.root.1
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc        95 May  5 21:41 pilot_heartbeat.json
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc      1040 May  5 21:41 memory_monitor_summary.json
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc        27 May  5 21:41 wrapper_checkpoint.txt
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc      8192 May  5 21:41 boinc_mmap_file
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc    359070 May  5 21:41 log.44506063._008818.job.log.tgz.1
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc      7723 May  5 21:41 heartbeat.json
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc      4352 May  5 21:41 pilotlog.txt
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc    361067 May  5 21:41 log.44506063._008818.job.log.1
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc       357 May  5 21:41 output.list
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc       620 May  5 21:41 runtime_log
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc    737280 May  5 21:41 result.tar.gz
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc       658 May  5 21:41 StWNDm8B9V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYQ1LDmUiABRo.diag
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc     10979 May  5 21:41 runtime_log.err
[2025-05-05 21:41:56] -rw-r--r--. 1 boinc boinc     21134 May  5 21:41 stderr.txt
[2025-05-05 21:41:56] HITS file was successfully produced:
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc 200181230 May  5 21:41 shared/HITS.pool.root.1
[2025-05-05 21:41:56]  *** Contents of shared directory: ***
[2025-05-05 21:41:56] total 415888
[2025-05-05 21:41:56] -rw-r--r--. 2 boinc boinc 224408856 May  5 20:42 ATLAS.root_0
[2025-05-05 21:41:56] -rw-r--r--. 2 boinc boinc     17569 May  5 20:42 start_atlas.sh
[2025-05-05 21:41:56] -rw-r--r--. 2 boinc boinc    508881 May  5 20:42 input.tar.gz
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc 200181230 May  5 21:41 HITS.pool.root.1
[2025-05-05 21:41:56] -rw-------. 1 boinc boinc    737280 May  5 21:41 result.tar.gz
21:41:57 (478423): run_atlas exited; CPU time 27808.303265
21:41:57 (478423): called boinc_finish(0)

</stderr_txt>
]]>

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