Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:02:35 (4312): wrapper (7.7.26015): starting
10:02:35 (4312): wrapper: running run_atlas (--nthreads 8)
[2025-05-06 10:02:35] Arguments: --nthreads 8
[2025-05-06 10:02:35] Threads: 8
[2025-05-06 10:02:35] Checking for CVMFS
[2025-05-06 10:02:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-06 10:02:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-06 10:02:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-06 10:02:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-06 10:02:38] 2.11.2.0 19028 1502 76948 145666 0 65 16043623 25165825 2224 130560 0 874424 99.714 745210 1375 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-06 10:02:38] CVMFS is ok
[2025-05-06 10:02:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-06 10:02:38] Checking for apptainer binary...
[2025-05-06 10:02:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-06 10:02:38] Running /usr/bin/apptainer --version
[2025-05-06 10:02:38] apptainer version 1.3.2-1.el7
[2025-05-06 10:02:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-06 10:03:02] cg-vwn387.simple-grid.lan
[2025-05-06 10:03:02] apptainer works
[2025-05-06 10:03:02] Set ATHENA_PROC_NUMBER=8
[2025-05-06 10:03:02] Set ATHENA_CORE_NUMBER=8
[2025-05-06 10:03:02] Starting ATLAS job with PandaID=6634337037
[2025-05-06 10:03:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 14:33:00]  *** The last 200 lines of the pilot log: ***
[2025-05-06 14:33:00] 2025-05-06 12:32:47,458 | INFO     | -- intersect: -49760761099.333435
[2025-05-06 14:33:00] 2025-05-06 12:32:47,459 | INFO     | intersect: -49760761099.333435
[2025-05-06 14:33:00] 2025-05-06 12:32:47,459 | INFO     | chi2: 7.483130952931726
[2025-05-06 14:33:00] 2025-05-06 12:32:47,460 | INFO     | sum of square deviations: 4844974562.5
[2025-05-06 14:33:00] 2025-05-06 12:32:47,462 | INFO     | sum of deviations: 159991046317.99997
[2025-05-06 14:33:00] 2025-05-06 12:32:47,462 | INFO     | mean x: 1746526851.5
[2025-05-06 14:33:00] 2025-05-06 12:32:47,462 | INFO     | mean y: 2415621.736
[2025-05-06 14:33:00] 2025-05-06 12:32:47,462 | INFO     | -- intersect: -57671500884.81061
[2025-05-06 14:33:00] 2025-05-06 12:32:47,462 | INFO     | intersect: -57671500884.81061
[2025-05-06 14:33:00] 2025-05-06 12:32:47,463 | INFO     | chi2: 6.755093163109567
[2025-05-06 14:33:00] 2025-05-06 12:32:47,463 | INFO     | current chi2=6.755093163109567 (change=9.729053178428332 %)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,463 | INFO     | right removable region: 249
[2025-05-06 14:33:00] 2025-05-06 12:32:47,464 | INFO     | sum of square deviations: 4844974562.5
[2025-05-06 14:33:00] 2025-05-06 12:32:47,466 | INFO     | sum of deviations: 66499624213.999985
[2025-05-06 14:33:00] 2025-05-06 12:32:47,466 | INFO     | mean x: 1746527156.5
[2025-05-06 14:33:00] 2025-05-06 12:32:47,466 | INFO     | mean y: 2449890.992
[2025-05-06 14:33:00] 2025-05-06 12:32:47,466 | INFO     | -- intersect: -23969481868.101925
[2025-05-06 14:33:00] 2025-05-06 12:32:47,466 | INFO     | intersect: -23969481868.101925
[2025-05-06 14:33:00] 2025-05-06 12:32:47,467 | INFO     | chi2: 3.357884719071313
[2025-05-06 14:33:00] 2025-05-06 12:32:47,467 | INFO     | current chi2=3.357884719071313 (change=55.127275732682875 %)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,467 | INFO     | sum of square deviations: 4560048290.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,469 | INFO     | sum of deviations: 17738745161.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,470 | INFO     | mean x: 1746527309.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,470 | INFO     | mean y: 2475972.7836734694
[2025-05-06 14:33:00] 2025-05-06 12:32:47,470 | INFO     | -- intersect: -6791575511.061051
[2025-05-06 14:33:00] 2025-05-06 12:32:47,470 | INFO     | intersect: -6791575511.061051
[2025-05-06 14:33:00] 2025-05-06 12:32:47,470 | INFO     | chi2: 1.9383930174435973
[2025-05-06 14:33:00] 2025-05-06 12:32:47,471 | INFO     | current chi2=1.9383930174435973 (change=42.273389957839385 %)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,471 | INFO     | sum of square deviations: 4286517580.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,473 | INFO     | sum of deviations: -21963240259.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,473 | INFO     | mean x: 1746527461.5
[2025-05-06 14:33:00] 2025-05-06 12:32:47,474 | INFO     | mean y: 2498062.433333333
[2025-05-06 14:33:00] 2025-05-06 12:32:47,474 | INFO     | -- intersect: 8951347924.811798
[2025-05-06 14:33:00] 2025-05-06 12:32:47,474 | INFO     | intersect: 8951347924.811798
[2025-05-06 14:33:00] 2025-05-06 12:32:47,474 | INFO     | chi2: 0.9281515803124125
[2025-05-06 14:33:00] 2025-05-06 12:32:47,474 | INFO     | current chi2=0.9281515803124125 (change=52.11747194918795 %)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,475 | INFO     | sum of square deviations: 4024149870.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,477 | INFO     | sum of deviations: -28152661135.000004
[2025-05-06 14:33:00] 2025-05-06 12:32:47,477 | INFO     | mean x: 1746527614.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,477 | INFO     | mean y: 2501633.9914893615
[2025-05-06 14:33:00] 2025-05-06 12:32:47,477 | INFO     | -- intersect: 12221082369.86803
[2025-05-06 14:33:00] 2025-05-06 12:32:47,478 | INFO     | intersect: 12221082369.86803
[2025-05-06 14:33:00] 2025-05-06 12:32:47,478 | INFO     | chi2: 0.8863230529886238
[2025-05-06 14:33:00] 2025-05-06 12:32:47,478 | INFO     | current chi2=0.8863230529886238 (change=4.506648290111125 %)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,478 | INFO     | left removable region: 40
[2025-05-06 14:33:00] 2025-05-06 12:32:47,479 | INFO     | sum of square deviations: 2830787960.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,481 | INFO     | sum of deviations: 5847207338.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,481 | INFO     | mean x: 1746528041.0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,481 | INFO     | mean y: 2498986.7799043064
[2025-05-06 14:33:00] 2025-05-06 12:32:47,481 | INFO     | -- intersect: -3605087212.420252
[2025-05-06 14:33:00] 2025-05-06 12:32:47,481 | INFO     | intersect: -3605087212.420252
[2025-05-06 14:33:00] 2025-05-06 12:32:47,482 | INFO     | chi2: 0.0002960305301348812
[2025-05-06 14:33:00] 2025-05-06 12:32:47,482 | INFO     | -- intersect: -3605087212.420252
[2025-05-06 14:33:00] 2025-05-06 12:32:47,482 | INFO     | current memory leak: 2.07 B/s (using 209 data points, chi2=0.00)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,483 | INFO     | ..............................
[2025-05-06 14:33:00] 2025-05-06 12:32:47,483 | INFO     | . Timing measurements:
[2025-05-06 14:33:00] 2025-05-06 12:32:47,483 | INFO     | . get job = 0 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,483 | INFO     | . initial setup = 7 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,483 | INFO     | . payload setup = 133 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,483 | INFO     | . stage-in = 0 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,484 | INFO     | . payload execution = 15649 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,484 | INFO     | . stage-out = 2 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,484 | INFO     | . log creation = 0 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,484 | INFO     | ..............................
[2025-05-06 14:33:00] 2025-05-06 12:32:47,610 | INFO     | 
[2025-05-06 14:33:00] 2025-05-06 12:32:47,610 | INFO     | job summary report
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | --------------------------------------------------
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | PanDA job id: 6634337037
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | task id: 44506063
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | errors: (none)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | pilot state: finished 
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | transexitcode: 0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | exeerrorcode: 0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,611 | INFO     | exeerrordiag: 
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | exitcode: 0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | exitmsg: OK
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | cpuconsumptiontime: 61874 s
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | nevents: 400
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | neventsw: 0
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | pid: 22654
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | pgrp: 22654
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | corecount: 8
[2025-05-06 14:33:00] 2025-05-06 12:32:47,612 | INFO     | event service: False
[2025-05-06 14:33:00] 2025-05-06 12:32:47,613 | INFO     | sizes: {0: 2393516, 1: 2393715, 2: 2393715, 12: 2393743, 23: 2393771, 34: 2393799, 45: 2393955, 55: 2393983, 66: 2394011, 77: 2394039, 88: 2394095, 91: 2394609, 98
[2025-05-06 14:33:00] 2025-05-06 12:32:47,613 | INFO     | --------------------------------------------------
[2025-05-06 14:33:00] 2025-05-06 12:32:47,613 | INFO     | 
[2025-05-06 14:33:00] 2025-05-06 12:32:47,613 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-05-06 14:33:00] 2025-05-06 12:32:47,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,642 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 14:33:00] 2025-05-06 12:32:47,642 | INFO     | job 6634337037 has completed (purged errors)
[2025-05-06 14:33:00] 2025-05-06 12:32:47,642 | INFO     | overall cleanup function is called
[2025-05-06 14:33:00] 2025-05-06 12:32:48,651 | INFO     | --- collectZombieJob: --- 10, [22654]
[2025-05-06 14:33:00] 2025-05-06 12:32:48,651 | INFO     | zombie collector waiting for pid 22654
[2025-05-06 14:33:00] 2025-05-06 12:32:48,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 14:33:00] 2025-05-06 12:32:48,652 | INFO     | collected zombie processes
[2025-05-06 14:33:00] 2025-05-06 12:32:48,652 | INFO     | will attempt to kill all subprocesses of pid=22654
[2025-05-06 14:33:00] 2025-05-06 12:32:48,736 | INFO     | process IDs to be killed: [22654] (in reverse order)
[2025-05-06 14:33:00] 2025-05-06 12:32:48,821 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 14:33:00] 2025-05-06 12:32:48,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 14:33:00] 2025-05-06 12:32:48,824 | INFO     | did not find any defunct processes belonging to 22654
[2025-05-06 14:33:00] 2025-05-06 12:32:48,827 | INFO     | did not find any defunct processes belonging to 22654
[2025-05-06 14:33:00] 2025-05-06 12:32:48,827 | INFO     | ready for new job
[2025-05-06 14:33:00] 2025-05-06 12:32:48,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 14:33:00] 2025-05-06 12:32:48,829 | INFO     | **************************************
[2025-05-06 14:33:00] 2025-05-06 12:32:48,830 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 14:33:00] 2025-05-06 12:32:48,830 | INFO     | **************************************
[2025-05-06 14:33:00] 2025-05-06 12:32:48,830 | INFO     | 
[2025-05-06 14:33:00] 2025-05-06 12:32:48,830 | INFO     | pilot is running in a VM
[2025-05-06 14:33:00] 2025-05-06 12:32:48,831 | INFO     | architecture information:
[2025-05-06 14:33:00] 2025-05-06 12:32:48,831 | INFO     | executing command: cat /etc/os-release
[2025-05-06 14:33:00] 2025-05-06 12:32:48,851 | INFO     | cat /etc/os-release:
[2025-05-06 14:33:00] NAME="CentOS Linux"
[2025-05-06 14:33:00] VERSION="7 (Core)"
[2025-05-06 14:33:00] ID="centos"
[2025-05-06 14:33:00] ID_LIKE="rhel fedora"
[2025-05-06 14:33:00] VERSION_ID="7"
[2025-05-06 14:33:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 14:33:00] ANSI_COLOR="0;31"
[2025-05-06 14:33:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 14:33:00] HOME_URL="https://www.centos.org/"
[2025-05-06 14:33:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 14:33:00] 
[2025-05-06 14:33:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 14:33:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 14:33:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 14:33:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 14:33:00] 
[2025-05-06 14:33:00] 2025-05-06 12:32:48,852 | INFO     | **************************************
[2025-05-06 14:33:00] 2025-05-06 12:32:49,355 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-05-06 14:33:00] 2025-05-06 12:32:49,379 | INFO     | sufficient remaining disk space (497858641920 B)
[2025-05-06 14:33:00] 2025-05-06 12:32:49,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 14:33:00] 2025-05-06 12:32:49,380 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 14:33:00] 2025-05-06 12:32:49,380 | INFO     | update_server=False
[2025-05-06 14:33:00] 2025-05-06 12:32:49,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 14:33:00] 2025-05-06 12:32:49,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 14:33:00] 2025-05-06 12:32:49,381 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-06 14:33:00] 2025-05-06 12:32:49,381 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 14:33:00] 2025-05-06 12:32:49,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 14:33:00] 2025-05-06 12:32:49,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 14:33:00] 2025-05-06 12:32:49,422 | INFO     | all data control threads have been joined
[2025-05-06 14:33:00] 2025-05-06 12:32:49,623 | INFO     | all payload control threads have been joined
[2025-05-06 14:33:00] 2025-05-06 12:32:49,666 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-06 14:33:00] 2025-05-06 12:32:49,666 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-06 14:33:00] 2025-05-06 12:32:49,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 14:33:00] 2025-05-06 12:32:49,667 | INFO     | will abort loop
[2025-05-06 14:33:00] 2025-05-06 12:32:49,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 14:33:00] 2025-05-06 12:32:50,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 14:33:00] 2025-05-06 12:32:50,256 | INFO     | all job control threads have been joined
[2025-05-06 14:33:00] 2025-05-06 12:32:50,386 | INFO     | [job] retrieve thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:50,386 | INFO     | [job] queue monitor thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:50,425 | INFO     | [data] control thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:50,533 | INFO     | [job] validate thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:50,629 | INFO     | [payload] control thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:50,638 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:50,672 | INFO     | [job] job monitor thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:50,889 | INFO     | [payload] validate_post thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:51,061 | INFO     | [payload] failed_post thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:51,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:51,085 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:51,262 | INFO     | [job] control thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:51,689 | INFO     | [data] copytool_in thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:51,866 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:51,891 | INFO     | [data] copytool_out thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:54,022 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 14:33:00] 2025-05-06 12:32:54,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338294425408)>', '<ExcThread(monitor, started 140337720850176)>']
[2025-05-06 14:33:00] 2025-05-06 12:32:55,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 14:33:00] 2025-05-06 12:32:55,413 | INFO     | [monitor] control thread has ended
[2025-05-06 14:33:00] 2025-05-06 12:32:59,952 | INFO     | all workflow threads have been joined
[2025-05-06 14:33:00] 2025-05-06 12:32:59,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 14:33:00] 2025-05-06 12:32:59,953 | INFO     | traces error code: 0
[2025-05-06 14:33:00] 2025-05-06 12:32:59,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 14:33:00] 2025-05-06 12:33:00,093 [wrapper] ==== pilot stdout END ====
[2025-05-06 14:33:00] 2025-05-06 12:33:00,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 14:33:00] 2025-05-06 12:33:00,104 [wrapper] pilotpid: 12007
[2025-05-06 14:33:00] 2025-05-06 12:33:00,109 [wrapper] Pilot exit status: 0
[2025-05-06 14:33:00] 2025-05-06 12:33:00,130 [wrapper] pandaids: 6634337037
[2025-05-06 14:33:00] 2025-05-06 12:33:00,166 [wrapper] cleanup supervisor_pilot 16426 12008
[2025-05-06 14:33:00] 2025-05-06 12:33:00,172 [wrapper] Test setup, not cleaning
[2025-05-06 14:33:00] 2025-05-06 12:33:00,176 [wrapper] apfmon messages muted
[2025-05-06 14:33:00] 2025-05-06 12:33:00,183 [wrapper] ==== wrapper stdout END ====
[2025-05-06 14:33:00] 2025-05-06 12:33:00,186 [wrapper] ==== wrapper stderr END ====
[2025-05-06 14:33:00]  *** Error codes and diagnostics ***
[2025-05-06 14:33:00]     "exeErrorCode": 0,
[2025-05-06 14:33:00]     "exeErrorDiag": "",
[2025-05-06 14:33:00]     "pilotErrorCode": 0,
[2025-05-06 14:33:00]     "pilotErrorDiag": "",
[2025-05-06 14:33:00]  *** Listing of results directory ***
[2025-05-06 14:33:00] total 421660
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc    495897 May  5 19:28 pilot3.tar.gz
[2025-05-06 14:33:00] -rwx------. 1 boinc boinc     37140 May  5 19:54 runpilot2-wrapper.sh
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc      5111 May  5 19:54 queuedata.json
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc       100 May  6 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 14:33:00] -rwxr-xr-x. 1 boinc boinc      7986 May  6 10:02 run_atlas
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc       105 May  6 10:02 job.xml
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc      6370 May  6 10:02 init_data.xml
[2025-05-06 14:33:00] -rw-r--r--. 2 boinc boinc 226567653 May  6 10:02 EVNT.44506061._000537.pool.root.1
[2025-05-06 14:33:00] -rw-r--r--. 2 boinc boinc     17569 May  6 10:02 start_atlas.sh
[2025-05-06 14:33:00] drwxrwx--x. 2 boinc boinc        68 May  6 10:02 shared
[2025-05-06 14:33:00] -rw-r--r--. 2 boinc boinc    508876 May  6 10:02 input.tar.gz
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc         0 May  6 10:02 boinc_lockfile
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc      2556 May  6 10:03 pandaJob.out
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc       424 May  6 10:03 setup.sh.local
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc    996793 May  6 10:06 agis_schedconf.cvmfs.json
[2025-05-06 14:33:00] drwx------. 4 boinc boinc      4096 May  6 10:06 pilot3
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc 197789441 May  6 14:31 HITS.44506063._013427.pool.root.1
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc       531 May  6 14:32 boinc_task_state.xml
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc      1020 May  6 14:32 memory_monitor_summary.json
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc   1596741 May  6 14:32 agis_ddmendpoints.agis.ALL.json
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc    416608 May  6 14:32 log.44506063._013427.job.log.tgz.1
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc        95 May  6 14:32 pilot_heartbeat.json
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc      7692 May  6 14:32 heartbeat.json
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc      8192 May  6 14:32 boinc_mmap_file
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc        28 May  6 14:32 wrapper_checkpoint.txt
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc      4726 May  6 14:32 pilotlog.txt
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc   1377877 May  6 14:33 log.44506063._013427.job.log.1
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc       357 May  6 14:33 output.list
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc       620 May  6 14:33 runtime_log
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc   1812480 May  6 14:33 result.tar.gz
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc     11031 May  6 14:33 runtime_log.err
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc       657 May  6 14:33 DOtLDm5BFW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrI2LDmjtCOrm.diag
[2025-05-06 14:33:00] -rw-r--r--. 1 boinc boinc     20517 May  6 14:33 stderr.txt
[2025-05-06 14:33:00] HITS file was successfully produced:
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc 197789441 May  6 14:31 shared/HITS.pool.root.1
[2025-05-06 14:33:00]  *** Contents of shared directory: ***
[2025-05-06 14:33:00] total 416708
[2025-05-06 14:33:00] -rw-r--r--. 2 boinc boinc 226567653 May  6 10:02 ATLAS.root_0
[2025-05-06 14:33:00] -rw-r--r--. 2 boinc boinc     17569 May  6 10:02 start_atlas.sh
[2025-05-06 14:33:00] -rw-r--r--. 2 boinc boinc    508876 May  6 10:02 input.tar.gz
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc 197789441 May  6 14:31 HITS.pool.root.1
[2025-05-06 14:33:00] -rw-------. 1 boinc boinc   1812480 May  6 14:33 result.tar.gz
14:33:01 (4312): run_atlas exited; CPU time 62085.991170
14:33:01 (4312): called boinc_finish(0)

</stderr_txt>
]]>

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