Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:44:16 (68888): wrapper (7.7.26015): starting
13:44:16 (68888): wrapper: running run_atlas (--nthreads 12)
[2025-05-06 13:44:16] Arguments: --nthreads 12
[2025-05-06 13:44:16] Threads: 12
[2025-05-06 13:44:16] Checking for CVMFS
[2025-05-06 13:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-06 13:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-06 13:44:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-06 13:44:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-06 13:44:16] 2.12.7.0 3720 152 47164 145675 0 56 3103680 4096001 0 130560 0 131817 99.983 78693 2565 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-06 13:44:16] CVMFS is ok
[2025-05-06 13:44:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-06 13:44:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-06 13:44:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-06 13:44:16] Further information can be found at the LHC@home message board.
[2025-05-06 13:44:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-06 13:44:16] Checking for apptainer binary...
[2025-05-06 13:44:16] apptainer is not installed, using version from CVMFS
[2025-05-06 13:44:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-06 13:44:16] ws24
[2025-05-06 13:44:16] apptainer works
[2025-05-06 13:44:17] Set ATHENA_PROC_NUMBER=12
[2025-05-06 13:44:17] Set ATHENA_CORE_NUMBER=12
[2025-05-06 13:44:17] Starting ATLAS job with PandaID=6634335780
[2025-05-06 13:44:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 13:52:09]  *** The last 200 lines of the pilot log: ***
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | extracted standard info from prmon json
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | extracted standard memory fields from prmon json
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | wrong length of table data, x=[1746531892.0, 1746531953.0, 1746532014.0, 1746532075.0, 1746532136.0], y=[1214.0, 616053.0, 616169.0, 1199617.0, 1199617.0] (must be
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | ..............................
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . Timing measurements:
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . get job = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . initial setup = 5 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . payload setup = 4 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . stage-in = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . payload execution = 296 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . stage-out = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . log creation = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | ..............................
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6634335780/pilotlog.txt
[2025-05-06 13:52:09] 2025-05-06 11:51:54,883 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-06 13:52:09] - Log from pilotlog.txt -
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6634335780/memory_monitor_summary.json (trf name=prmon)
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | extracted standard info from prmon json
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | extracted standard memory fields from prmon json
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | wrong length of table data, x=[1746531892.0, 1746531953.0, 1746532014.0, 1746532075.0, 1746532136.0], y=[1214.0, 616053.0, 616169.0, 1199617.0, 1199617.0] (must be
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | ..............................
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . Timing measurements:
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . get job = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . initial setup = 5 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . payload setup = 4 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . stage-in = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . payload execution = 296 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . stage-out = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . log creation = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | ..............................
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6634335780/pilotlog.txt
[2025-05-06 13:52:09] 2025-05-06 11:51:54,883 | WARNING  | 
[2025-05-06 13:52:09] [begin log extracts]
[2025-05-06 13:52:09] - Log from pilotlog.txt -
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6634335780/memory_monitor_summary.json (trf name=prmon)
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | extracted standard info from prmon json
[2025-05-06 13:52:09] 2025-05-06 11:51:54,869 | INFO     | extracted standard memory fields from prmon json
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-06 13:52:09] 2025-05-06 11:51:54,870 | WARNING  | wrong length of table data, x=[1746531892.0, 1746531953.0, 1746532014.0, 1746532075.0, 1746532136.0], y=[1214.0, 616053.0, 616169.0, 1199617.0, 1199617.0] (must be
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | ..............................
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . Timing measurements:
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . get job = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . initial setup = 5 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . payload setup = 4 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . stage-in = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . payload execution = 296 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . stage-out = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | . log creation = 0 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | ..............................
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-06 13:52:09] 2025-05-06 11:51:54,871 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6634335780/pilotlog.txt
[2025-05-06 13:52:09] [end log extracts]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,883 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-06 13:52:09] 2025-05-06 11:51:54,884 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-06 13:52:09] 2025-05-06 11:51:54,946 | INFO     | 
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | job summary report
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | --------------------------------------------------
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | PanDA job id: 6634335780
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | task id: 44506063
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-06 13:49:41,002 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | pilot state: failed 
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | transexitcode: 65
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | exeerrorcode: 65
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "DetectorStore_Impl                                               FATAL in
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | exitcode: 65
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "DetectorStore_Impl                                               FATAL in sysI
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | cpuconsumptiontime: 36 s
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | nevents: 0
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | neventsw: 0
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | pid: 79162
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | pgrp: 79162
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | corecount: 12
[2025-05-06 13:52:09] 2025-05-06 11:51:54,947 | INFO     | event service: False
[2025-05-06 13:52:09] 2025-05-06 11:51:54,948 | INFO     | sizes: {0: 2393743, 1: 2393743, 4: 2393977, 11: 2394005, 305: 2423102, 306: 2427347, 308: 2427531, 432: 2427701}
[2025-05-06 13:52:09] 2025-05-06 11:51:54,948 | INFO     | --------------------------------------------------
[2025-05-06 13:52:09] 2025-05-06 11:51:54,948 | INFO     | 
[2025-05-06 13:52:09] 2025-05-06 11:51:54,948 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 13:52:09] 2025-05-06 11:51:54,973 | INFO     | job 6634335780 has completed (purged errors)
[2025-05-06 13:52:09] 2025-05-06 11:51:54,974 | INFO     | overall cleanup function is called
[2025-05-06 13:52:09] 2025-05-06 11:51:55,979 | INFO     | --- collectZombieJob: --- 10, [79162]
[2025-05-06 13:52:09] 2025-05-06 11:51:55,979 | INFO     | zombie collector waiting for pid 79162
[2025-05-06 13:52:09] 2025-05-06 11:51:55,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 13:52:09] 2025-05-06 11:51:55,979 | INFO     | collected zombie processes
[2025-05-06 13:52:09] 2025-05-06 11:51:55,979 | INFO     | will attempt to kill all subprocesses of pid=79162
[2025-05-06 13:52:09] 2025-05-06 11:51:56,101 | INFO     | process IDs to be killed: [79162] (in reverse order)
[2025-05-06 13:52:09] 2025-05-06 11:51:56,166 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 13:52:09] 2025-05-06 11:51:56,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 13:52:09] 2025-05-06 11:51:56,170 | INFO     | did not find any defunct processes belonging to 79162
[2025-05-06 13:52:09] 2025-05-06 11:51:56,173 | INFO     | did not find any defunct processes belonging to 79162
[2025-05-06 13:52:09] 2025-05-06 11:51:56,173 | INFO     | ready for new job
[2025-05-06 13:52:09] 2025-05-06 11:51:56,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 13:52:09] 2025-05-06 11:51:56,174 | INFO     | **************************************
[2025-05-06 13:52:09] 2025-05-06 11:51:56,174 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 13:52:09] 2025-05-06 11:51:56,174 | INFO     | **************************************
[2025-05-06 13:52:09] 2025-05-06 11:51:56,174 | INFO     | 
[2025-05-06 13:52:09] 2025-05-06 11:51:56,175 | INFO     | architecture information:
[2025-05-06 13:52:09] 2025-05-06 11:51:56,175 | INFO     | executing command: cat /etc/os-release
[2025-05-06 13:52:09] 2025-05-06 11:51:56,187 | INFO     | cat /etc/os-release:
[2025-05-06 13:52:09] NAME="CentOS Linux"
[2025-05-06 13:52:09] VERSION="7 (Core)"
[2025-05-06 13:52:09] ID="centos"
[2025-05-06 13:52:09] ID_LIKE="rhel fedora"
[2025-05-06 13:52:09] VERSION_ID="7"
[2025-05-06 13:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 13:52:09] ANSI_COLOR="0;31"
[2025-05-06 13:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 13:52:09] HOME_URL="https://www.centos.org/"
[2025-05-06 13:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 13:52:09] 
[2025-05-06 13:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 13:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 13:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 13:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 13:52:09] 
[2025-05-06 13:52:09] 2025-05-06 11:51:56,187 | INFO     | **************************************
[2025-05-06 13:52:09] 2025-05-06 11:51:56,690 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-05-06 13:52:09] 2025-05-06 11:51:56,710 | INFO     | sufficient remaining disk space (50168070144 B)
[2025-05-06 13:52:09] 2025-05-06 11:51:56,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 13:52:09] 2025-05-06 11:51:56,711 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 13:52:09] 2025-05-06 11:51:56,711 | INFO     | update_server=False
[2025-05-06 13:52:09] 2025-05-06 11:51:56,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 13:52:09] 2025-05-06 11:51:56,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:52:09] 2025-05-06 11:51:56,942 | INFO     | all data control threads have been joined
[2025-05-06 13:52:09] 2025-05-06 11:51:57,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 13:52:09] 2025-05-06 11:51:57,139 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-06 13:52:09] 2025-05-06 11:51:57,140 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-06 13:52:09] 2025-05-06 11:51:57,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:52:09] 2025-05-06 11:51:57,140 | INFO     | will abort loop
[2025-05-06 13:52:09] 2025-05-06 11:51:57,218 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 13:52:09] 2025-05-06 11:51:57,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 13:52:09] 2025-05-06 11:51:57,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 13:52:09] 2025-05-06 11:51:57,273 | INFO     | all payload control threads have been joined
[2025-05-06 13:52:09] 2025-05-06 11:51:57,513 | INFO     | all job control threads have been joined
[2025-05-06 13:52:09] 2025-05-06 11:51:57,716 | INFO     | [job] retrieve thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:57,716 | INFO     | [job] queue monitor thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:57,851 | INFO     | [payload] failed_post thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:57,947 | INFO     | [data] control thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,063 | INFO     | [job] validate thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,145 | INFO     | [job] job monitor thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,264 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,276 | INFO     | [payload] control thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,413 | INFO     | [payload] validate_post thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 13:52:09] 2025-05-06 11:51:58,466 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,519 | INFO     | [job] control thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,737 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:58,950 | INFO     | [data] copytool_in thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:51:59,031 | INFO     | [data] copytool_out thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:52:02,467 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 13:52:09] 2025-05-06 11:52:04,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136777731008320)>', '<ExcThread(monitor, started 136777058744064)>']
[2025-05-06 13:52:09] 2025-05-06 11:52:05,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 13:52:09] 2025-05-06 11:52:05,259 | INFO     | [monitor] control thread has ended
[2025-05-06 13:52:09] 2025-05-06 11:52:09,571 | INFO     | all workflow threads have been joined
[2025-05-06 13:52:09] 2025-05-06 11:52:09,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 13:52:09] 2025-05-06 11:52:09,572 | INFO     | traces error code: 0
[2025-05-06 13:52:09] 2025-05-06 11:52:09,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 13:52:09] 2025-05-06 11:52:09,655 [wrapper] ==== pilot stdout END ====
[2025-05-06 13:52:09] 2025-05-06 11:52:09,658 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 13:52:09] 2025-05-06 11:52:09,660 [wrapper] pilotpid: 72583
[2025-05-06 13:52:09] 2025-05-06 11:52:09,663 [wrapper] Pilot exit status: 0
[2025-05-06 13:52:09] 2025-05-06 11:52:09,674 [wrapper] pandaids: 6634335780
[2025-05-06 13:52:09] 2025-05-06 11:52:09,710 [wrapper] cleanup supervisor_pilot   72589 72584
[2025-05-06 13:52:09] 2025-05-06 11:52:09,714 [wrapper] Test setup, not cleaning
[2025-05-06 13:52:09] 2025-05-06 11:52:09,718 [wrapper] apfmon messages muted
[2025-05-06 13:52:09] 2025-05-06 11:52:09,720 [wrapper] ==== wrapper stdout END ====
[2025-05-06 13:52:09] 2025-05-06 11:52:09,722 [wrapper] ==== wrapper stderr END ====
[2025-05-06 13:52:09]  *** Error codes and diagnostics ***
[2025-05-06 13:52:09]     "exeErrorCode": 65,
[2025-05-06 13:52:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitialize(): standard std::exception is caught\"",
[2025-05-06 13:52:09]     "pilotErrorCode": 1305,
[2025-05-06 13:52:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitia",
[2025-05-06 13:52:09]  *** Listing of results directory ***
[2025-05-06 13:52:09] total 224400
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc    495897 May  5 18:25 pilot3.tar.gz
[2025-05-06 13:52:09] -rwx------ 1 boinc boinc     37140 May  5 18:57 runpilot2-wrapper.sh
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc      5111 May  5 18:57 queuedata.json
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc       100 May  6 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 13:52:09] -rwxr-xr-x 1 boinc boinc      7986 May  6 13:44 run_atlas
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc       105 May  6 13:44 job.xml
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc      9498 May  6 13:44 init_data.xml
[2025-05-06 13:52:09] -rw-r--r-- 2 boinc boinc 225646618 May  6 13:44 EVNT.44506061._000512.pool.root.1
[2025-05-06 13:52:09] -rw-r--r-- 2 boinc boinc     17569 May  6 13:44 start_atlas.sh
[2025-05-06 13:52:09] drwxrwx--x 2 boinc boinc      4096 May  6 13:44 shared
[2025-05-06 13:52:09] -rw-r--r-- 2 boinc boinc    508878 May  6 13:44 input.tar.gz
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc         0 May  6 13:44 boinc_lockfile
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc      2556 May  6 13:44 pandaJob.out
[2025-05-06 13:52:09] -rw------- 1 boinc boinc       424 May  6 13:44 setup.sh.local
[2025-05-06 13:52:09] -rw------- 1 boinc boinc    998300 May  6 13:44 agis_schedconf.cvmfs.json
[2025-05-06 13:52:09] -rw------- 1 boinc boinc   1596741 May  6 13:44 agis_ddmendpoints.agis.ALL.json
[2025-05-06 13:52:09] drwx------ 4 boinc boinc      4096 May  6 13:44 pilot3
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc       526 May  6 13:49 boinc_task_state.xml
[2025-05-06 13:52:09] -rw------- 1 boinc boinc       997 May  6 13:49 memory_monitor_summary.json
[2025-05-06 13:52:09] -rw------- 1 boinc boinc     46359 May  6 13:49 log.44506063._012785.job.log.tgz.1
[2025-05-06 13:52:09] -rw------- 1 boinc boinc        95 May  6 13:51 pilot_heartbeat.json
[2025-05-06 13:52:09] -rw------- 1 boinc boinc     11687 May  6 13:51 heartbeat.json
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc      8192 May  6 13:52 boinc_mmap_file
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc        23 May  6 13:52 wrapper_checkpoint.txt
[2025-05-06 13:52:09] -rw------- 1 boinc boinc      4546 May  6 13:52 pilotlog.txt
[2025-05-06 13:52:09] -rw------- 1 boinc boinc     97205 May  6 13:52 log.44506063._012785.job.log.1
[2025-05-06 13:52:09] -rw------- 1 boinc boinc       188 May  6 13:52 output.list
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc       620 May  6 13:52 runtime_log
[2025-05-06 13:52:09] -rw------- 1 boinc boinc    163840 May  6 13:52 result.tar.gz
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc     10915 May  6 13:52 runtime_log.err
[2025-05-06 13:52:09] -rw------- 1 boinc boinc       625 May  6 13:52 kIzKDm6IEW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWB2LDmrQFiom.diag
[2025-05-06 13:52:09] -rw-r--r-- 1 boinc boinc     22467 May  6 13:52 stderr.txt
[2025-05-06 13:52:09] No HITS result produced
[2025-05-06 13:52:09]  *** Contents of shared directory: ***
[2025-05-06 13:52:09] total 221044
[2025-05-06 13:52:09] -rw-r--r-- 2 boinc boinc 225646618 May  6 13:44 ATLAS.root_0
[2025-05-06 13:52:09] -rw-r--r-- 2 boinc boinc     17569 May  6 13:44 start_atlas.sh
[2025-05-06 13:52:09] -rw-r--r-- 2 boinc boinc    508878 May  6 13:44 input.tar.gz
[2025-05-06 13:52:09] -rw------- 1 boinc boinc    163840 May  6 13:52 result.tar.gz
13:52:11 (68888): run_atlas exited; CPU time 36.394119
13:52:11 (68888): called boinc_finish(0)

</stderr_txt>
]]>

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