Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-05 21:39:36 (45963): Detected: vboxwrapper 26206
2025-05-05 21:39:37 (45963): Detected: BOINC client v8.0.2
2025-05-05 21:39:37 (45963): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-05 21:39:37 (45963): Detected: Sandbox Configuration Enabled
2025-05-05 21:39:37 (45963): Successfully copied 'init_data.xml' to the shared directory.
2025-05-05 21:39:37 (45963): Create VM. (boinc_2d4e4818e79a4128, slot#20)
2025-05-05 21:39:38 (45963): Setting Memory Size for VM. (4800MB)
2025-05-05 21:39:38 (45963): Setting CPU Count for VM. (8)
2025-05-05 21:39:38 (45963): Setting Chipset Options for VM.
2025-05-05 21:39:38 (45963): Setting Graphics Controller Options for VM.
2025-05-05 21:39:38 (45963): Setting Boot Options for VM.
2025-05-05 21:39:39 (45963): Setting Network Configuration for NAT.
2025-05-05 21:39:39 (45963): Enabling VM Network Access.
2025-05-05 21:39:39 (45963): Disabling USB Support for VM.
2025-05-05 21:39:39 (45963): Disabling COM Port Support for VM.
2025-05-05 21:39:39 (45963): Disabling Audio Support for VM.
2025-05-05 21:39:39 (45963): Disabling Clipboard Support for VM.
2025-05-05 21:39:40 (45963): Disabling Drag and Drop Support for VM.
2025-05-05 21:39:40 (45963): Adding storage controller(s) to VM.
2025-05-05 21:39:40 (45963): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-05 21:39:42 (45963): Adding VirtualBox Guest Additions to VM.
2025-05-05 21:39:42 (45963): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-05 21:39:43 (45963): forwarding host port 52113 to guest port 80
2025-05-05 21:39:43 (45963): Enabling remote desktop for VM.
2025-05-05 21:39:43 (45963): Required extension pack not installed, remote desktop not enabled.
2025-05-05 21:39:43 (45963): Enabling shared directory for VM.
2025-05-05 21:39:43 (45963): Starting VM using VBoxManage interface. (boinc_2d4e4818e79a4128, slot#20)
2025-05-05 21:39:53 (45963): Successfully started VM. (PID = '46034')
2025-05-05 21:39:53 (45963): Reporting VM Process ID to BOINC.
2025-05-05 21:39:53 (45963): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-05 21:39:53 (45963): Guest Log: CPUID EDX: 0x178bfbff
2025-05-05 21:39:53 (45963): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-05 21:39:53 (45963): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-05 21:39:53 (45963): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-05 21:39:53 (45963): Detected: Web Application Enabled (http://localhost:52113)
2025-05-05 21:39:53 (45963): Preference change detected
2025-05-05 21:39:53 (45963): Setting CPU throttle for VM. (100%)
2025-05-05 21:39:53 (45963): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 30 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-05 21:39:56 (45963): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-05 21:39:56 (45963): Guest Log: BIOS: Booting from Hard Disk...
2025-05-05 21:40:00 (45963): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-05 21:40:00 (45963): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-05 21:40:00 (45963): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-05 21:40:19 (45963): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-05 21:40:19 (45963): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-05 21:40:45 (45963): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.000207 main     Log opened 2025-05-05T19:40:43.267129000Z
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.000408 main     OS Product: Linux
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.000497 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.000578 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.000662 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.000664 main     Process ID: 1379
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.000665 main     Package type: LINUX_64BITS_GENERIC
2025-05-05 21:40:45 (45963): Guest Log: 00:00:00.003037 main     5.2.32 r132073 started. Verbose level = 0
2025-05-05 21:40:46 (45963): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-05 21:40:46 (45963): Guest Log: [INFO] Mounting shared directory
2025-05-05 21:40:46 (45963): Guest Log: [INFO] Checking for init_data.xml
2025-05-05 21:40:59 (45963): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-05 21:40:59 (45963): Guest Log: [INFO] Detected branch: prod
2025-05-05 21:40:59 (45963): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-05 21:41:00 (45963): Guest Log: Copying input files
2025-05-05 21:41:10 (45963): Guest Log: Copied input files into RunAtlas.
2025-05-05 21:41:10 (45963): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-05 21:41:10 (45963): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-05 21:41:10 (45963): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-05 21:41:10 (45963): Guest Log: Further information can be found at the LHC@home message board.
2025-05-05 21:41:22 (45963): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-05 21:41:23 (45963): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-05 21:41:23 (45963): Guest Log: 2.6.3.0 1662 0 34060 145647 4 1 3117345 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-05 21:41:26 (45963): Guest Log: copied the webapp to /var/www
2025-05-05 21:41:26 (45963): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-05 21:41:26 (45963): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-05 21:41:26 (45963): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-05 21:41:27 (45963): Guest Log:  *** Starting ATLAS job. (PandaID=6634335016 taskID=44506063) ***
2025-05-05 23:19:53 (45963): Status Report: Elapsed Time: '6000.000000'
2025-05-05 23:19:53 (45963): Status Report: CPU Time: '21075.870000'
2025-05-06 00:59:53 (45963): Status Report: Elapsed Time: '12000.000000'
2025-05-06 00:59:53 (45963): Status Report: CPU Time: '46381.690000'
2025-05-06 02:39:53 (45963): Status Report: Elapsed Time: '18000.000000'
2025-05-06 02:39:53 (45963): Status Report: CPU Time: '77883.380000'
2025-05-06 04:19:52 (45963): Status Report: Elapsed Time: '24000.000000'
2025-05-06 04:19:52 (45963): Status Report: CPU Time: '111390.510000'
2025-05-06 05:05:53 (45963): Guest Log:  *** Job finished ***
2025-05-06 05:05:53 (45963): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:45,221 | INFO     | [data] queue_monitor thread has finished
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:48,702 | INFO     | job.realtimelogging is not enabled
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:49,704 | INFO     | [payload] run_realtimelog thread has finished
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:51,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645808994112)>', '<ExcThread(monitor, started 139645148980992)>']
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:51,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:51,610 | INFO     | [monitor] control thread has ended
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,463 | INFO     | all workflow threads have been joined
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,464 | INFO     | end of generic workflow (traces error code: 0)
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,464 | INFO     | traces error code: 0
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,738 [wrapper] ==== pilot stdout END ====
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,772 [wrapper] ==== wrapper stdout RESUME ====
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,811 [wrapper] pilotpid: 6051
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:56,838 [wrapper] Pilot exit status: 0
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:57,057 [wrapper] pandaids: 6634335016
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:57,257 [wrapper] cleanup supervisor_pilot 25419 6052
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:57,282 [wrapper] Test setup, not cleaning
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:57,309 [wrapper] apfmon messages muted
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:57,372 [wrapper] ==== wrapper stdout END ====
2025-05-06 05:05:53 (45963): Guest Log: 2025-05-06 03:04:57,411 [wrapper] ==== wrapper stderr END ====
2025-05-06 05:05:53 (45963): Guest Log:  *** Error codes and diagnostics ***
2025-05-06 05:05:53 (45963): Guest Log:     "exeErrorCode": 0,
2025-05-06 05:05:53 (45963): Guest Log:     "exeErrorDiag": "",
2025-05-06 05:05:53 (45963): Guest Log:     "pilotErrorCode": 0,
2025-05-06 05:05:53 (45963): Guest Log:     "pilotErrorDiag": "",
2025-05-06 05:05:53 (45963): Guest Log:  *** Listing of results directory ***
2025-05-06 05:05:53 (45963): Guest Log: total 201080
2025-05-06 05:05:53 (45963): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  5 16:00 pilot3.tar.gz
2025-05-06 05:05:53 (45963): Guest Log: -rwx------. 1 atlas atlas     37140 May  5 16:06 runpilot2-wrapper.sh
2025-05-06 05:05:53 (45963): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  5 16:06 queuedata.json
2025-05-06 05:05:53 (45963): Guest Log: -rw-r-----. 1 atlas atlas     17569 May  5 19:40 start_atlas.sh
2025-05-06 05:05:53 (45963): Guest Log: -rw-r-----. 1 atlas atlas    508877 May  5 19:40 input.tar.gz
2025-05-06 05:05:54 (45963): Guest Log: -rw-r--r--. 1 atlas atlas     10401 May  5 19:40 init_data.xml
2025-05-06 05:05:54 (45963): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  5 19:41 EVNT.44506061._000492.pool.root.1 -> /data/./ATLAS.root_0
2025-05-06 05:05:54 (45963): Guest Log: -rw-r--r--. 1 atlas atlas      2556 May  5 19:41 pandaJob.out
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas       424 May  5 19:41 setup.sh.local
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas    996880 May  5 19:43 agis_schedconf.cvmfs.json
2025-05-06 05:05:54 (45963): Guest Log: drwx------. 4 atlas atlas      4096 May  5 19:43 pilot3
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas 198174443 May  6 03:02 HITS.44506063._012300.pool.root.1
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas      1033 May  6 03:03 memory_monitor_summary.json
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas   1596741 May  6 03:03 agis_ddmendpoints.agis.ALL.json
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas    453733 May  6 03:03 log.44506063._012300.job.log.tgz.1
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas      7714 May  6 03:04 heartbeat.json
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas        95 May  6 03:04 pilot_heartbeat.json
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas      4608 May  6 03:04 pilotlog.txt
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas   1519004 May  6 03:04 log.44506063._012300.job.log.1
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas       357 May  6 03:04 output.list
2025-05-06 05:05:54 (45963): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  6 03:04 runtime_log
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas   1996800 May  6 03:04 result.tar.gz
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas       677 May  6 03:04 wLOMDmSWDW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm551LDmLskeLn.diag
2025-05-06 05:05:54 (45963): Guest Log: -rw-r--r--. 1 atlas atlas     10980 May  6 03:04 runtime_log.err
2025-05-06 05:05:54 (45963): Guest Log: Looking for outputfile HITS.44506063._012300.pool.root.1
2025-05-06 05:05:54 (45963): Guest Log: HITS file was successfully produced
2025-05-06 05:05:54 (45963): Guest Log: -rw-------. 1 atlas atlas 198174443 May  6 03:02 /home/atlas/RunAtlas/HITS.44506063._012300.pool.root.1
2025-05-06 05:05:54 (45963): Guest Log: Successfully finished the ATLAS job!
2025-05-06 05:05:54 (45963): Guest Log: Copying the results back to the shared directory!
2025-05-06 05:05:54 (45963): Guest Log:  *** Contents of shared directory: ***
2025-05-06 05:05:54 (45963): Guest Log: total 218796
2025-05-06 05:05:54 (45963): Guest Log: -rw-rw----. 1 root root 221502997 May  5 19:39 ATLAS.root_0
2025-05-06 05:05:54 (45963): Guest Log: -rw-rw-r--. 1 root root     10401 May  5 19:39 init_data.xml
2025-05-06 05:05:54 (45963): Guest Log: -rw-rw----. 1 root root    508877 May  5 19:39 input.tar.gz
2025-05-06 05:05:54 (45963): Guest Log: -rw-r--r--. 1 root root   1996800 May  6  2025 result.tar.gz
2025-05-06 05:05:54 (45963): Guest Log: -rw-rw----. 1 root root     17569 May  5 19:39 start_atlas.sh
2025-05-06 05:05:54 (45963): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-06 05:05:54 (45963): VM Completion File Detected.
2025-05-06 05:05:54 (45963): Powering off VM.
2025-05-06 05:05:55 (45963): Successfully stopped VM.
2025-05-06 05:05:55 (45963): Deregistering VM. (boinc_2d4e4818e79a4128, slot#20)
2025-05-06 05:05:55 (45963): Removing network bandwidth throttle group from VM.
2025-05-06 05:05:55 (45963): Removing VM from VirtualBox.
05:06:00 (45963): called boinc_finish(0)

</stderr_txt>
]]>

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