Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:41:25 (26949): wrapper (7.7.26015): starting
14:41:25 (26949): wrapper: running run_atlas (--nthreads 10)
[2025-05-05 14:41:25] Arguments: --nthreads 10
[2025-05-05 14:41:25] Threads: 10
[2025-05-05 14:41:25] Checking for CVMFS
[2025-05-05 14:41:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 14:41:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 14:41:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 14:41:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 14:41:27] 2.11.2.0 9271 65799 364952 145646 3 196 10668490 18432000 10095 130560 0 213360493 99.000 513808320 35334 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-05 14:41:27] CVMFS is ok
[2025-05-05 14:41:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-05 14:41:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-05 14:41:27] Further information can be found at the LHC@home message board.
[2025-05-05 14:41:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 14:41:27] Checking for apptainer binary...
[2025-05-05 14:41:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-05 14:41:27] Running /usr/bin/apptainer --version
[2025-05-05 14:41:27] apptainer version 1.3.2-1.el7
[2025-05-05 14:41:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 14:41:34] c-211-18.aglt2.org
[2025-05-05 14:41:34] apptainer works
[2025-05-05 14:41:34] Set ATHENA_PROC_NUMBER=10
[2025-05-05 14:41:34] Set ATHENA_CORE_NUMBER=10
[2025-05-05 14:41:34] Starting ATLAS job with PandaID=6634334751
[2025-05-05 14:41:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 02:02:02]  *** The last 200 lines of the pilot log: ***
[2025-05-06 02:02:02] 2025-05-06 06:01:43,593 | INFO     | mean y: 2543649.5825825827
[2025-05-06 02:02:02] 2025-05-06 06:01:43,593 | INFO     | -- intersect: -9211027159.803175
[2025-05-06 02:02:02] 2025-05-06 06:01:43,593 | INFO     | intersect: -9211027159.803175
[2025-05-06 02:02:02] 2025-05-06 06:01:43,595 | INFO     | chi2: 6.065195706156015
[2025-05-06 02:02:02] 2025-05-06 06:01:43,596 | INFO     | sum of square deviations: 89555769445.93338
[2025-05-06 02:02:02] 2025-05-06 06:01:43,606 | INFO     | sum of deviations: 525560433574.44495
[2025-05-06 02:02:02] 2025-05-06 06:01:43,607 | INFO     | mean x: 1746490759.5446293
[2025-05-06 02:02:02] 2025-05-06 06:01:43,607 | INFO     | mean y: 2546779.815431165
[2025-05-06 02:02:02] 2025-05-06 06:01:43,607 | INFO     | -- intersect: -10246781058.009506
[2025-05-06 02:02:02] 2025-05-06 06:01:43,607 | INFO     | intersect: -10246781058.009506
[2025-05-06 02:02:02] 2025-05-06 06:01:43,608 | INFO     | chi2: 5.288446572936518
[2025-05-06 02:02:02] 2025-05-06 06:01:43,608 | INFO     | current chi2=5.288446572936518 (change=12.806662321400717 %)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,609 | INFO     | right removable region: 660
[2025-05-06 02:02:02] 2025-05-06 06:01:43,610 | INFO     | sum of square deviations: 89555589861.84285
[2025-05-06 02:02:02] 2025-05-06 06:01:43,620 | INFO     | sum of deviations: 299035068737.7823
[2025-05-06 02:02:02] 2025-05-06 06:01:43,621 | INFO     | mean x: 1746491064.546142
[2025-05-06 02:02:02] 2025-05-06 06:01:43,621 | INFO     | mean y: 2557357.6792738275
[2025-05-06 02:02:02] 2025-05-06 06:01:43,621 | INFO     | -- intersect: -5829150929.231352
[2025-05-06 02:02:02] 2025-05-06 06:01:43,621 | INFO     | intersect: -5829150929.231352
[2025-05-06 02:02:02] 2025-05-06 06:01:43,622 | INFO     | chi2: 3.3218478528821267
[2025-05-06 02:02:02] 2025-05-06 06:01:43,623 | INFO     | current chi2=3.3218478528821267 (change=45.23098653666627 %)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,624 | INFO     | sum of square deviations: 87538586125.3399
[2025-05-06 02:02:02] 2025-05-06 06:01:43,634 | INFO     | sum of deviations: 153984842960.0751
[2025-05-06 02:02:02] 2025-05-06 06:01:43,634 | INFO     | mean x: 1746491217.050305
[2025-05-06 02:02:02] 2025-05-06 06:01:43,635 | INFO     | mean y: 2568324.87652439
[2025-05-06 02:02:02] 2025-05-06 06:01:43,635 | INFO     | -- intersect: -3069598906.652398
[2025-05-06 02:02:02] 2025-05-06 06:01:43,635 | INFO     | intersect: -3069598906.652398
[2025-05-06 02:02:02] 2025-05-06 06:01:43,636 | INFO     | chi2: 1.7429132861637078
[2025-05-06 02:02:02] 2025-05-06 06:01:43,636 | INFO     | current chi2=1.7429132861637078 (change=47.53181472018629 %)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,637 | INFO     | sum of square deviations: 85552094588.81403
[2025-05-06 02:02:02] 2025-05-06 06:01:43,648 | INFO     | sum of deviations: 52821527533.48234
[2025-05-06 02:02:02] 2025-05-06 06:01:43,648 | INFO     | mean x: 1746491369.5545316
[2025-05-06 02:02:02] 2025-05-06 06:01:43,648 | INFO     | mean y: 2576079.0568356374
[2025-05-06 02:02:02] 2025-05-06 06:01:43,649 | INFO     | -- intersect: -1075741668.8288603
[2025-05-06 02:02:02] 2025-05-06 06:01:43,649 | INFO     | intersect: -1075741668.8288603
[2025-05-06 02:02:02] 2025-05-06 06:01:43,650 | INFO     | chi2: 0.8738568692327165
[2025-05-06 02:02:02] 2025-05-06 06:01:43,650 | INFO     | current chi2=0.8738568692327165 (change=49.86228654231297 %)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,651 | INFO     | sum of square deviations: 83595882689.76509
[2025-05-06 02:02:02] 2025-05-06 06:01:43,661 | INFO     | monitor loop #2190: job 0:6634334751 is in state 'finished'
[2025-05-06 02:02:02] 2025-05-06 06:01:43,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,662 | INFO     | sum of deviations: 28765721842.588173
[2025-05-06 02:02:02] 2025-05-06 06:01:43,662 | INFO     | mean x: 1746491522.0588236
[2025-05-06 02:02:02] 2025-05-06 06:01:43,662 | INFO     | mean y: 2577951.273993808
[2025-05-06 02:02:02] 2025-05-06 06:01:43,662 | INFO     | -- intersect: -598397691.3952293
[2025-05-06 02:02:02] 2025-05-06 06:01:43,662 | INFO     | intersect: -598397691.3952293
[2025-05-06 02:02:02] 2025-05-06 06:01:43,663 | INFO     | chi2: 0.8209525934172319
[2025-05-06 02:02:02] 2025-05-06 06:01:43,664 | INFO     | current chi2=0.8209525934172319 (change=6.054112255470033 %)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,664 | INFO     | left removable region: 40
[2025-05-06 02:02:02] 2025-05-06 06:01:43,665 | INFO     | sum of square deviations: 73903033159.43712
[2025-05-06 02:02:02] 2025-05-06 06:01:43,674 | INFO     | sum of deviations: 84215645692.7886
[2025-05-06 02:02:02] 2025-05-06 06:01:43,675 | INFO     | mean x: 1746491949.0758064
[2025-05-06 02:02:02] 2025-05-06 06:01:43,675 | INFO     | mean y: 2580530.4725806452
[2025-05-06 02:02:02] 2025-05-06 06:01:43,675 | INFO     | -- intersect: -1987621236.6370842
[2025-05-06 02:02:02] 2025-05-06 06:01:43,675 | INFO     | intersect: -1987621236.6370842
[2025-05-06 02:02:02] 2025-05-06 06:01:43,676 | INFO     | chi2: 0.008017945807137628
[2025-05-06 02:02:02] 2025-05-06 06:01:43,676 | INFO     | -- intersect: -1987621236.6370842
[2025-05-06 02:02:02] 2025-05-06 06:01:43,677 | INFO     | current memory leak: 1.14 B/s (using 620 data points, chi2=0.01)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,678 | INFO     | ..............................
[2025-05-06 02:02:02] 2025-05-06 06:01:43,678 | INFO     | . Timing measurements:
[2025-05-06 02:02:02] 2025-05-06 06:01:43,678 | INFO     | . get job = 0 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,678 | INFO     | . initial setup = 3 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,678 | INFO     | . payload setup = 19 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,678 | INFO     | . stage-in = 0 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,678 | INFO     | . payload execution = 40641 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,679 | INFO     | . stage-out = 5 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,679 | INFO     | . log creation = 1 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,679 | INFO     | ..............................
[2025-05-06 02:02:02] 2025-05-06 06:01:43,880 | INFO     | 
[2025-05-06 02:02:02] 2025-05-06 06:01:43,880 | INFO     | job summary report
[2025-05-06 02:02:02] 2025-05-06 06:01:43,880 | INFO     | --------------------------------------------------
[2025-05-06 02:02:02] 2025-05-06 06:01:43,880 | INFO     | PanDA job id: 6634334751
[2025-05-06 02:02:02] 2025-05-06 06:01:43,880 | INFO     | task id: 44506063
[2025-05-06 02:02:02] 2025-05-06 06:01:43,881 | INFO     | errors: (none)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 02:02:02] 2025-05-06 06:01:43,881 | INFO     | pilot state: finished 
[2025-05-06 02:02:02] 2025-05-06 06:01:43,881 | INFO     | transexitcode: 0
[2025-05-06 02:02:02] 2025-05-06 06:01:43,881 | INFO     | exeerrorcode: 0
[2025-05-06 02:02:02] 2025-05-06 06:01:43,881 | INFO     | exeerrordiag: 
[2025-05-06 02:02:02] 2025-05-06 06:01:43,881 | INFO     | exitcode: 0
[2025-05-06 02:02:02] 2025-05-06 06:01:43,882 | INFO     | exitmsg: OK
[2025-05-06 02:02:02] 2025-05-06 06:01:43,882 | INFO     | cpuconsumptiontime: 92209 s
[2025-05-06 02:02:02] 2025-05-06 06:01:43,882 | INFO     | nevents: 400
[2025-05-06 02:02:02] 2025-05-06 06:01:43,882 | INFO     | neventsw: 0
[2025-05-06 02:02:02] 2025-05-06 06:01:43,882 | INFO     | pid: 11254
[2025-05-06 02:02:02] 2025-05-06 06:01:43,884 | INFO     | pgrp: 11254
[2025-05-06 02:02:02] 2025-05-06 06:01:43,884 | INFO     | corecount: 10
[2025-05-06 02:02:02] 2025-05-06 06:01:43,884 | INFO     | event service: False
[2025-05-06 02:02:02] 2025-05-06 06:01:43,885 | INFO     | sizes: {0: 2393565, 1: 2393764, 2: 2393764, 12: 2393792, 23: 2393820, 24: 2394054, 34: 2394210, 40667: 2435540, 40668: 2435539, 40674: 2444536, 40676: 2444592, 407
[2025-05-06 02:02:02] 2025-05-06 06:01:43,885 | INFO     | --------------------------------------------------
[2025-05-06 02:02:02] 2025-05-06 06:01:43,885 | INFO     | 
[2025-05-06 02:02:02] 2025-05-06 06:01:43,885 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-06 02:02:02] 2025-05-06 06:01:43,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,926 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,926 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,926 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,926 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,926 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 02:02:02] 2025-05-06 06:01:43,929 | INFO     | job 6634334751 has completed (purged errors)
[2025-05-06 02:02:02] 2025-05-06 06:01:43,929 | INFO     | overall cleanup function is called
[2025-05-06 02:02:02] 2025-05-06 06:01:44,940 | INFO     | --- collectZombieJob: --- 10, [11254]
[2025-05-06 02:02:02] 2025-05-06 06:01:44,940 | INFO     | zombie collector waiting for pid 11254
[2025-05-06 02:02:02] 2025-05-06 06:01:44,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 02:02:02] 2025-05-06 06:01:44,941 | INFO     | collected zombie processes
[2025-05-06 02:02:02] 2025-05-06 06:01:44,941 | INFO     | will attempt to kill all subprocesses of pid=11254
[2025-05-06 02:02:02] 2025-05-06 06:01:45,992 | INFO     | process IDs to be killed: [11254] (in reverse order)
[2025-05-06 02:02:02] 2025-05-06 06:01:46,241 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 02:02:02] 2025-05-06 06:01:46,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 02:02:02] 2025-05-06 06:01:46,259 | INFO     | did not find any defunct processes belonging to 11254
[2025-05-06 02:02:02] 2025-05-06 06:01:46,276 | INFO     | did not find any defunct processes belonging to 11254
[2025-05-06 02:02:02] 2025-05-06 06:01:46,277 | INFO     | ready for new job
[2025-05-06 02:02:02] 2025-05-06 06:01:46,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 02:02:02] 2025-05-06 06:01:46,282 | INFO     | **************************************
[2025-05-06 02:02:02] 2025-05-06 06:01:46,282 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 02:02:02] 2025-05-06 06:01:46,283 | INFO     | **************************************
[2025-05-06 02:02:02] 2025-05-06 06:01:46,283 | INFO     | 
[2025-05-06 02:02:02] 2025-05-06 06:01:46,285 | INFO     | architecture information:
[2025-05-06 02:02:02] 2025-05-06 06:01:46,286 | INFO     | executing command: cat /etc/os-release
[2025-05-06 02:02:02] 2025-05-06 06:01:46,394 | INFO     | cat /etc/os-release:
[2025-05-06 02:02:02] NAME="CentOS Linux"
[2025-05-06 02:02:02] VERSION="7 (Core)"
[2025-05-06 02:02:02] ID="centos"
[2025-05-06 02:02:02] ID_LIKE="rhel fedora"
[2025-05-06 02:02:02] VERSION_ID="7"
[2025-05-06 02:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 02:02:02] ANSI_COLOR="0;31"
[2025-05-06 02:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 02:02:02] HOME_URL="https://www.centos.org/"
[2025-05-06 02:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 02:02:02] 
[2025-05-06 02:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 02:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 02:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 02:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 02:02:02] 
[2025-05-06 02:02:02] 2025-05-06 06:01:46,394 | INFO     | **************************************
[2025-05-06 02:02:02] 2025-05-06 06:01:46,903 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-06 02:02:02] 2025-05-06 06:01:47,070 | INFO     | sufficient remaining disk space (56947113984 B)
[2025-05-06 02:02:02] 2025-05-06 06:01:47,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 02:02:02] 2025-05-06 06:01:47,072 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 02:02:02] 2025-05-06 06:01:47,073 | INFO     | update_server=False
[2025-05-06 02:02:02] 2025-05-06 06:01:47,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 02:02:02] 2025-05-06 06:01:47,073 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-06 02:02:02] 2025-05-06 06:01:47,074 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 02:02:02] 2025-05-06 06:01:47,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 02:02:02] 2025-05-06 06:01:47,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 02:02:02] 2025-05-06 06:01:47,157 | INFO     | all data control threads have been joined
[2025-05-06 02:02:02] 2025-05-06 06:01:47,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 02:02:02] 2025-05-06 06:01:47,206 | INFO     | aborting loop
[2025-05-06 02:02:02] 2025-05-06 06:01:48,083 | INFO     | [job] validate thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:48,093 | INFO     | [job] retrieve thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:48,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 02:02:02] 2025-05-06 06:01:48,154 | INFO     | all payload control threads have been joined
[2025-05-06 02:02:02] 2025-05-06 06:01:48,175 | INFO     | [data] control thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:48,212 | INFO     | [job] job monitor thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:48,255 | INFO     | all job control threads have been joined
[2025-05-06 02:02:02] 2025-05-06 06:01:48,724 | INFO     | [payload] failed_post thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:48,747 | INFO     | [payload] validate_post thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:48,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 02:02:02] 2025-05-06 06:01:48,989 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:49,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:49,159 | INFO     | [payload] control thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:49,265 | INFO     | [job] control thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:49,493 | INFO     | [data] copytool_in thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:49,493 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:49,493 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:49,900 | INFO     | [job] queue monitor thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:50,131 | INFO     | [data] copytool_out thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:50,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 02:02:02] 2025-05-06 06:01:54,481 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 02:02:02] 2025-05-06 06:01:55,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821500467008)>', '<ExcThread(monitor, started 139821209069312)>']
[2025-05-06 02:02:02] 2025-05-06 06:01:56,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 02:02:02] 2025-05-06 06:01:56,152 | INFO     | [monitor] control thread has ended
[2025-05-06 02:02:02] 2025-05-06 06:02:00,330 | INFO     | all workflow threads have been joined
[2025-05-06 02:02:02] 2025-05-06 06:02:00,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 02:02:02] 2025-05-06 06:02:00,331 | INFO     | traces error code: 0
[2025-05-06 02:02:02] 2025-05-06 06:02:00,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 02:02:02] 2025-05-06 06:02:00,882 [wrapper] ==== pilot stdout END ====
[2025-05-06 02:02:02] 2025-05-06 06:02:00,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 02:02:02] 2025-05-06 06:02:00,990 [wrapper] pilotpid: 7238
[2025-05-06 02:02:02] 2025-05-06 06:02:01,038 [wrapper] Pilot exit status: 0
[2025-05-06 02:02:02] 2025-05-06 06:02:01,166 [wrapper] pandaids: 6634334751
[2025-05-06 02:02:02] 2025-05-06 06:02:01,440 [wrapper] cleanup supervisor_pilot 17202 7242
[2025-05-06 02:02:02] 2025-05-06 06:02:01,446 [wrapper] Test setup, not cleaning
[2025-05-06 02:02:02] 2025-05-06 06:02:01,465 [wrapper] apfmon messages muted
[2025-05-06 02:02:02] 2025-05-06 06:02:01,480 [wrapper] ==== wrapper stdout END ====
[2025-05-06 02:02:02] 2025-05-06 06:02:01,533 [wrapper] ==== wrapper stderr END ====
[2025-05-06 02:02:02]  *** Error codes and diagnostics ***
[2025-05-06 02:02:02]     "exeErrorCode": 0,
[2025-05-06 02:02:02]     "exeErrorDiag": "",
[2025-05-06 02:02:02]     "pilotErrorCode": 0,
[2025-05-06 02:02:02]     "pilotErrorDiag": "",
[2025-05-06 02:02:02]  *** Listing of results directory ***
[2025-05-06 02:02:02] total 420476
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas    495897 May  5 11:32 pilot3.tar.gz
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas      5111 May  5 11:38 queuedata.json
[2025-05-06 02:02:02] -rwx------ 1 boincer umatlas     37140 May  5 11:44 runpilot2-wrapper.sh
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas       100 May  5 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 02:02:02] -rwxr-xr-x 1 boincer umatlas      7986 May  5 14:41 run_atlas
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas       105 May  5 14:41 job.xml
[2025-05-06 02:02:02] -rw-r--r-- 2 boincer umatlas 221970252 May  5 14:41 EVNT.44506061._000482.pool.root.1
[2025-05-06 02:02:02] -rw-r--r-- 2 boincer umatlas     17569 May  5 14:41 start_atlas.sh
[2025-05-06 02:02:02] drwxrwx--x 2 boincer umatlas      4096 May  5 14:41 shared
[2025-05-06 02:02:02] -rw-r--r-- 2 boincer umatlas    508880 May  5 14:41 input.tar.gz
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas         0 May  5 14:41 boinc_lockfile
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas      2556 May  5 14:41 pandaJob.out
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas       467 May  5 14:41 setup.sh.local
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas    996872 May  5 14:42 agis_schedconf.cvmfs.json
[2025-05-06 02:02:02] drwx------ 4 boincer umatlas      4096 May  5 14:42 pilot3
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas      6036 May  6 01:57 init_data.xml
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas 197478641 May  6 01:59 HITS.44506063._012040.pool.root.1
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas       531 May  6 01:59 boinc_task_state.xml
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas      1061 May  6 02:00 memory_monitor_summary.json
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas   1596741 May  6 02:00 agis_ddmendpoints.agis.ALL.json
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas    634716 May  6 02:00 log.44506063._012040.job.log.tgz.1
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas        95 May  6 02:01 pilot_heartbeat.json
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas        28 May  6 02:01 wrapper_checkpoint.txt
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas      7748 May  6 02:01 heartbeat.json
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas      4476 May  6 02:02 pilotlog.txt
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas   3003259 May  6 02:02 log.44506063._012040.job.log.1
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas       357 May  6 02:02 output.list
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas       620 May  6 02:02 runtime_log
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas   3655680 May  6 02:02 result.tar.gz
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas       663 May  6 02:02 x8HKDmhADW7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmk7FLDm1sAD9m.diag
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas     11421 May  6 02:02 runtime_log.err
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas      8192 May  6 02:02 boinc_mmap_file
[2025-05-06 02:02:02] -rw-r--r-- 1 boincer umatlas     20943 May  6 02:02 stderr.txt
[2025-05-06 02:02:02] HITS file was successfully produced:
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas 197478641 May  6 01:59 shared/HITS.pool.root.1
[2025-05-06 02:02:02]  *** Contents of shared directory: ***
[2025-05-06 02:02:02] total 413716
[2025-05-06 02:02:02] -rw-r--r-- 2 boincer umatlas 221970252 May  5 14:41 ATLAS.root_0
[2025-05-06 02:02:02] -rw-r--r-- 2 boincer umatlas     17569 May  5 14:41 start_atlas.sh
[2025-05-06 02:02:02] -rw-r--r-- 2 boincer umatlas    508880 May  5 14:41 input.tar.gz
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas 197478641 May  6 01:59 HITS.pool.root.1
[2025-05-06 02:02:02] -rw------- 1 boincer umatlas   3655680 May  6 02:02 result.tar.gz
02:02:04 (26949): run_atlas exited; CPU time 93939.816512
02:02:04 (26949): called boinc_finish(0)

</stderr_txt>
]]>

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