Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:13:56 (3477): wrapper (7.7.26015): starting
11:13:56 (3477): wrapper: running run_atlas (--nthreads 8)
[2025-05-06 11:13:56] Arguments: --nthreads 8
[2025-05-06 11:13:56] Threads: 8
[2025-05-06 11:13:56] Checking for CVMFS
[2025-05-06 11:15:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-06 11:15:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-06 11:15:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-06 11:15:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-06 11:15:12] 2.11.2.0 26336 1589 74920 145670 2 27 25051074 25165824 1089 130560 0 654881 99.200 803088 2392 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-06 11:15:12] CVMFS is ok
[2025-05-06 11:15:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-06 11:15:12] Checking for apptainer binary...
[2025-05-06 11:15:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-06 11:15:12] Running /usr/bin/apptainer --version
[2025-05-06 11:15:12] apptainer version 1.3.2-1.el7
[2025-05-06 11:15:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-06 11:15:21] cg-vwn498.simple-grid.lan
[2025-05-06 11:15:21] apptainer works
[2025-05-06 11:15:21] Set ATHENA_PROC_NUMBER=8
[2025-05-06 11:15:21] Set ATHENA_CORE_NUMBER=8
[2025-05-06 11:15:31] Starting ATLAS job with PandaID=6634334707
[2025-05-06 11:15:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 13:46:28]  *** The last 200 lines of the pilot log: ***
[2025-05-06 13:46:28] 2025-05-06 11:46:08,967 | INFO     | -- intersect: -72256894753.66702
[2025-05-06 13:46:28] 2025-05-06 11:46:08,967 | INFO     | intersect: -72256894753.66702
[2025-05-06 13:46:28] 2025-05-06 11:46:08,967 | INFO     | chi2: 2.3694667849768853
[2025-05-06 13:46:28] 2025-05-06 11:46:08,968 | INFO     | current chi2=2.3694667849768853 (change=52.410698733435765 %)
[2025-05-06 13:46:28] 2025-05-06 11:46:08,968 | INFO     | sum of square deviations: 797291228.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,969 | INFO     | sum of deviations: 6058056033.999996
[2025-05-06 13:46:28] 2025-05-06 11:46:08,969 | INFO     | mean x: 1746527751.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,969 | INFO     | mean y: 2516334.708029197
[2025-05-06 13:46:28] 2025-05-06 11:46:08,969 | INFO     | -- intersect: -13268121305.486845
[2025-05-06 13:46:28] 2025-05-06 11:46:08,969 | INFO     | intersect: -13268121305.486845
[2025-05-06 13:46:28] 2025-05-06 11:46:08,970 | INFO     | chi2: 0.5974440943428538
[2025-05-06 13:46:28] 2025-05-06 11:46:08,970 | INFO     | current chi2=0.5974440943428538 (change=74.78571558247515 %)
[2025-05-06 13:46:28] 2025-05-06 11:46:08,970 | INFO     | sum of square deviations: 713140813.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,971 | INFO     | sum of deviations: -8888134808.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,971 | INFO     | mean x: 1746527903.5
[2025-05-06 13:46:28] 2025-05-06 11:46:08,971 | INFO     | mean y: 2543118.242424242
[2025-05-06 13:46:28] 2025-05-06 11:46:08,972 | INFO     | -- intersect: 21770159231.726055
[2025-05-06 13:46:28] 2025-05-06 11:46:08,972 | INFO     | intersect: 21770159231.726055
[2025-05-06 13:46:28] 2025-05-06 11:46:08,972 | INFO     | chi2: 0.01429443297839919
[2025-05-06 13:46:28] 2025-05-06 11:46:08,972 | INFO     | current chi2=0.01429443297839919 (change=97.60740241409165 %)
[2025-05-06 13:46:28] 2025-05-06 11:46:08,972 | INFO     | sum of square deviations: 635130048.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,973 | INFO     | sum of deviations: -9223478526.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,973 | INFO     | mean x: 1746528056.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,974 | INFO     | mean y: 2543753.8661417323
[2025-05-06 13:46:28] 2025-05-06 11:46:08,974 | INFO     | -- intersect: 25365954082.663128
[2025-05-06 13:46:28] 2025-05-06 11:46:08,974 | INFO     | intersect: 25365954082.663128
[2025-05-06 13:46:28] 2025-05-06 11:46:08,974 | INFO     | chi2: 0.01018927737404077
[2025-05-06 13:46:28] 2025-05-06 11:46:08,975 | INFO     | current chi2=0.01018927737404077 (change=28.718562048329314 %)
[2025-05-06 13:46:28] 2025-05-06 11:46:08,975 | INFO     | sum of square deviations: 563026370.5
[2025-05-06 13:46:28] 2025-05-06 11:46:08,976 | INFO     | sum of deviations: -8659242190.000002
[2025-05-06 13:46:28] 2025-05-06 11:46:08,976 | INFO     | mean x: 1746528208.5
[2025-05-06 13:46:28] 2025-05-06 11:46:08,976 | INFO     | mean y: 2542551.1967213117
[2025-05-06 13:46:28] 2025-05-06 11:46:08,976 | INFO     | -- intersect: 26863825683.70378
[2025-05-06 13:46:28] 2025-05-06 11:46:08,976 | INFO     | intersect: 26863825683.70378
[2025-05-06 13:46:28] 2025-05-06 11:46:08,977 | INFO     | chi2: 0.009571585655630372
[2025-05-06 13:46:28] 2025-05-06 11:46:08,977 | INFO     | current chi2=0.009571585655630372 (change=6.062173947527354 %)
[2025-05-06 13:46:28] 2025-05-06 11:46:08,977 | INFO     | left removable region: 50
[2025-05-06 13:46:28] 2025-05-06 11:46:08,977 | INFO     | sum of square deviations: 233641590.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,978 | INFO     | sum of deviations: -3836221008.9999995
[2025-05-06 13:46:28] 2025-05-06 11:46:08,978 | INFO     | mean x: 1746528788.0
[2025-05-06 13:46:28] 2025-05-06 11:46:08,978 | INFO     | mean y: 2531281.032967033
[2025-05-06 13:46:28] 2025-05-06 11:46:08,978 | INFO     | -- intersect: 28679234043.366104
[2025-05-06 13:46:28] 2025-05-06 11:46:08,978 | INFO     | intersect: 28679234043.366104
[2025-05-06 13:46:28] 2025-05-06 11:46:08,979 | INFO     | chi2: 0.008664754155615611
[2025-05-06 13:46:28] 2025-05-06 11:46:08,979 | INFO     | -- intersect: 28679234043.366104
[2025-05-06 13:46:28] 2025-05-06 11:46:08,979 | INFO     | current memory leak: -16.42 B/s (using 91 data points, chi2=0.01)
[2025-05-06 13:46:28] 2025-05-06 11:46:08,980 | INFO     | ..............................
[2025-05-06 13:46:28] 2025-05-06 11:46:08,980 | INFO     | . Timing measurements:
[2025-05-06 13:46:28] 2025-05-06 11:46:08,980 | INFO     | . get job = 0 s
[2025-05-06 13:46:28] 2025-05-06 11:46:08,980 | INFO     | . initial setup = 11 s
[2025-05-06 13:46:28] 2025-05-06 11:46:08,980 | INFO     | . payload setup = 9 s
[2025-05-06 13:46:28] 2025-05-06 11:46:08,980 | INFO     | . stage-in = 0 s
[2025-05-06 13:46:28] 2025-05-06 11:46:08,980 | INFO     | . payload execution = 8969 s
[2025-05-06 13:46:28] 2025-05-06 11:46:08,981 | INFO     | . stage-out = 0 s
[2025-05-06 13:46:28] 2025-05-06 11:46:08,981 | INFO     | . log creation = 0 s
[2025-05-06 13:46:28] 2025-05-06 11:46:08,981 | INFO     | ..............................
[2025-05-06 13:46:28] 2025-05-06 11:46:09,002 | INFO     | sufficient remaining disk space (498746785792 B)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,008 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,125 | INFO     | 
[2025-05-06 13:46:28] 2025-05-06 11:46:09,125 | INFO     | job summary report
[2025-05-06 13:46:28] 2025-05-06 11:46:09,125 | INFO     | --------------------------------------------------
[2025-05-06 13:46:28] 2025-05-06 11:46:09,125 | INFO     | PanDA job id: 6634334707
[2025-05-06 13:46:28] 2025-05-06 11:46:09,125 | INFO     | task id: 44506063
[2025-05-06 13:46:28] 2025-05-06 11:46:09,125 | INFO     | errors: (none)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | pilot state: finished 
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | transexitcode: 0
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | exeerrorcode: 0
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | exeerrordiag: 
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | exitcode: 0
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | exitmsg: OK
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | cpuconsumptiontime: 59500 s
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | nevents: 400
[2025-05-06 13:46:28] 2025-05-06 11:46:09,126 | INFO     | neventsw: 0
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | pid: 13838
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | pgrp: 13838
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | corecount: 8
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | event service: False
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | sizes: {0: 2393737, 1: 2393765, 6: 2393971, 12: 2393999, 8981: 2421745, 8982: 2421744, 8983: 2430869, 8984: 2430925, 8993: 2431095}
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | --------------------------------------------------
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | 
[2025-05-06 13:46:28] 2025-05-06 11:46:09,127 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-06 13:46:28] 2025-05-06 11:46:09,135 | INFO     | size of work directory /var/lib/boinc/slots/4/PanDA_Pilot-6634334707: 3828456 B (within 2537553920 B limit)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,135 | INFO     | pfn file=/var/lib/boinc/slots/4/PanDA_Pilot-6634334707/HITS.44506063._011996.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,136 | INFO     | total size of present files: 0 B (workdir size: 3828456 B)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,136 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/4/PanDA_Pilot-6634334707/HITS.44506063._011996.pool.root.1 since it does not exist
[2025-05-06 13:46:28] 2025-05-06 11:46:09,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 13:46:28] 2025-05-06 11:46:09,159 | INFO     | job 6634334707 has completed (purged errors)
[2025-05-06 13:46:28] 2025-05-06 11:46:09,159 | INFO     | overall cleanup function is called
[2025-05-06 13:46:28] 2025-05-06 11:46:09,234 | INFO     | number of running child processes to parent process 13838: 1
[2025-05-06 13:46:28] 2025-05-06 11:46:09,234 | INFO     | maximum number of monitored processes: 6
[2025-05-06 13:46:28] 2025-05-06 11:46:09,234 | INFO     | aborting job monitoring since job object (job id=6634334707) has expired
[2025-05-06 13:46:28] 2025-05-06 11:46:10,169 | INFO     | --- collectZombieJob: --- 10, [13838]
[2025-05-06 13:46:28] 2025-05-06 11:46:10,170 | INFO     | zombie collector waiting for pid 13838
[2025-05-06 13:46:28] 2025-05-06 11:46:10,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 13:46:28] 2025-05-06 11:46:10,170 | INFO     | collected zombie processes
[2025-05-06 13:46:28] 2025-05-06 11:46:10,170 | INFO     | will attempt to kill all subprocesses of pid=13838
[2025-05-06 13:46:28] 2025-05-06 11:46:10,270 | INFO     | process IDs to be killed: [13838] (in reverse order)
[2025-05-06 13:46:28] 2025-05-06 11:46:10,372 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 13:46:28] 2025-05-06 11:46:10,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 13:46:28] 2025-05-06 11:46:10,375 | INFO     | did not find any defunct processes belonging to 13838
[2025-05-06 13:46:28] 2025-05-06 11:46:10,378 | INFO     | did not find any defunct processes belonging to 13838
[2025-05-06 13:46:28] 2025-05-06 11:46:10,379 | INFO     | ready for new job
[2025-05-06 13:46:28] 2025-05-06 11:46:10,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 13:46:28] 2025-05-06 11:46:10,380 | INFO     | **************************************
[2025-05-06 13:46:28] 2025-05-06 11:46:10,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 13:46:28] 2025-05-06 11:46:10,381 | INFO     | **************************************
[2025-05-06 13:46:28] 2025-05-06 11:46:10,381 | INFO     | 
[2025-05-06 13:46:28] 2025-05-06 11:46:10,381 | INFO     | pilot is running in a VM
[2025-05-06 13:46:28] 2025-05-06 11:46:10,382 | INFO     | architecture information:
[2025-05-06 13:46:28] 2025-05-06 11:46:10,384 | INFO     | executing command: cat /etc/os-release
[2025-05-06 13:46:28] 2025-05-06 11:46:10,414 | INFO     | cat /etc/os-release:
[2025-05-06 13:46:28] NAME="CentOS Linux"
[2025-05-06 13:46:28] VERSION="7 (Core)"
[2025-05-06 13:46:28] ID="centos"
[2025-05-06 13:46:28] ID_LIKE="rhel fedora"
[2025-05-06 13:46:28] VERSION_ID="7"
[2025-05-06 13:46:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 13:46:28] ANSI_COLOR="0;31"
[2025-05-06 13:46:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 13:46:28] HOME_URL="https://www.centos.org/"
[2025-05-06 13:46:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 13:46:28] 
[2025-05-06 13:46:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 13:46:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 13:46:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 13:46:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 13:46:28] 
[2025-05-06 13:46:28] 2025-05-06 11:46:10,414 | INFO     | **************************************
[2025-05-06 13:46:28] 2025-05-06 11:46:10,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-06 13:46:28] 2025-05-06 11:46:10,937 | INFO     | sufficient remaining disk space (498750980096 B)
[2025-05-06 13:46:28] 2025-05-06 11:46:10,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 13:46:28] 2025-05-06 11:46:10,938 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 13:46:28] 2025-05-06 11:46:10,938 | INFO     | update_server=False
[2025-05-06 13:46:28] 2025-05-06 11:46:10,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 13:46:28] 2025-05-06 11:46:10,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:46:28] 2025-05-06 11:46:10,939 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-06 13:46:28] 2025-05-06 11:46:10,939 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 13:46:28] 2025-05-06 11:46:10,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 13:46:28] 2025-05-06 11:46:10,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 13:46:28] 2025-05-06 11:46:10,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 13:46:28] 2025-05-06 11:46:10,940 | INFO     | aborting loop
[2025-05-06 13:46:28] 2025-05-06 11:46:10,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 13:46:28] 2025-05-06 11:46:11,026 | INFO     | all payload control threads have been joined
[2025-05-06 13:46:28] 2025-05-06 11:46:11,676 | INFO     | all data control threads have been joined
[2025-05-06 13:46:28] 2025-05-06 11:46:11,944 | INFO     | [job] retrieve thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:11,945 | INFO     | [job] queue monitor thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:11,945 | INFO     | [job] job monitor thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:12,032 | INFO     | [payload] control thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:12,049 | INFO     | [payload] failed_post thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:12,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 13:46:28] 2025-05-06 11:46:12,079 | INFO     | all job control threads have been joined
[2025-05-06 13:46:28] 2025-05-06 11:46:12,351 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:12,461 | INFO     | [job] validate thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:12,681 | INFO     | [data] control thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:13,084 | INFO     | [job] control thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:13,100 | INFO     | [data] copytool_in thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:13,380 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:13,380 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:13,389 | INFO     | [payload] validate_post thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:14,057 | INFO     | [data] copytool_out thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:14,948 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:21,492 | INFO     | job.realtimelogging is not enabled
[2025-05-06 13:46:28] 2025-05-06 11:46:22,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 13:46:28] 2025-05-06 11:46:22,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234549077824)>', '<ExcThread(monitor, started 140233920190208)>']
[2025-05-06 13:46:28] 2025-05-06 11:46:23,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 13:46:28] 2025-05-06 11:46:23,008 | INFO     | [monitor] control thread has ended
[2025-05-06 13:46:28] 2025-05-06 11:46:27,658 | INFO     | all workflow threads have been joined
[2025-05-06 13:46:28] 2025-05-06 11:46:27,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 13:46:28] 2025-05-06 11:46:27,659 | INFO     | traces error code: 0
[2025-05-06 13:46:28] 2025-05-06 11:46:27,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 13:46:28] 2025-05-06 11:46:27,787 [wrapper] ==== pilot stdout END ====
[2025-05-06 13:46:28] 2025-05-06 11:46:27,801 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 13:46:28] 2025-05-06 11:46:27,807 [wrapper] pilotpid: 7375
[2025-05-06 13:46:28] 2025-05-06 11:46:27,811 [wrapper] Pilot exit status: 0
[2025-05-06 13:46:28] 2025-05-06 11:46:27,830 [wrapper] pandaids: 6634334707
[2025-05-06 13:46:28] 2025-05-06 11:46:27,879 [wrapper] cleanup supervisor_pilot 30553 7376
[2025-05-06 13:46:28] 2025-05-06 11:46:27,883 [wrapper] Test setup, not cleaning
[2025-05-06 13:46:28] 2025-05-06 11:46:27,888 [wrapper] apfmon messages muted
[2025-05-06 13:46:28] 2025-05-06 11:46:27,892 [wrapper] ==== wrapper stdout END ====
[2025-05-06 13:46:28] 2025-05-06 11:46:27,898 [wrapper] ==== wrapper stderr END ====
[2025-05-06 13:46:28]  *** Error codes and diagnostics ***
[2025-05-06 13:46:28]     "exeErrorCode": 0,
[2025-05-06 13:46:28]     "exeErrorDiag": "",
[2025-05-06 13:46:28]     "pilotErrorCode": 0,
[2025-05-06 13:46:28]     "pilotErrorDiag": "",
[2025-05-06 13:46:28]  *** Listing of results directory ***
[2025-05-06 13:46:28] total 418908
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc    495897 May  5 17:32 pilot3.tar.gz
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc      5111 May  5 17:38 queuedata.json
[2025-05-06 13:46:28] -rwx------. 1 boinc boinc     37140 May  5 17:41 runpilot2-wrapper.sh
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc       100 May  6 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 13:46:28] -rwxr-xr-x. 1 boinc boinc      7986 May  6 11:13 run_atlas
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc       105 May  6 11:13 job.xml
[2025-05-06 13:46:28] -rw-r--r--. 2 boinc boinc 221421156 May  6 11:13 EVNT.44506061._000480.pool.root.1
[2025-05-06 13:46:28] -rw-r--r--. 2 boinc boinc    508878 May  6 11:13 input.tar.gz
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc      6369 May  6 11:13 init_data.xml
[2025-05-06 13:46:28] -rw-r--r--. 2 boinc boinc     17569 May  6 11:13 start_atlas.sh
[2025-05-06 13:46:28] drwxrwx--x. 2 boinc boinc        68 May  6 11:13 shared
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc         0 May  6 11:13 boinc_lockfile
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc      2557 May  6 11:15 pandaJob.out
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc       424 May  6 11:15 setup.sh.local
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc    998300 May  6 11:15 agis_schedconf.cvmfs.json
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc   1596741 May  6 11:15 agis_ddmendpoints.agis.ALL.json
[2025-05-06 13:46:28] drwx------. 4 boinc boinc      4096 May  6 11:15 pilot3
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc 201374971 May  6 13:45 HITS.44506063._011996.pool.root.1
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc       529 May  6 13:45 boinc_task_state.xml
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc      1026 May  6 13:45 memory_monitor_summary.json
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc    349570 May  6 13:45 log.44506063._011996.job.log.tgz.1
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc        95 May  6 13:46 pilot_heartbeat.json
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc      7700 May  6 13:46 heartbeat.json
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc      8192 May  6 13:46 boinc_mmap_file
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc        27 May  6 13:46 wrapper_checkpoint.txt
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc      4611 May  6 13:46 pilotlog.txt
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc    818082 May  6 13:46 log.44506063._011996.job.log.1
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc       357 May  6 13:46 output.list
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc       620 May  6 13:46 runtime_log
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc   1187840 May  6 13:46 result.tar.gz
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc     11012 May  6 13:46 runtime_log.err
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc       653 May  6 13:46 hZcNDml7CW7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmF21LDmxc9WAn.diag
[2025-05-06 13:46:28] -rw-r--r--. 1 boinc boinc     20952 May  6 13:46 stderr.txt
[2025-05-06 13:46:28] HITS file was successfully produced:
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc 201374971 May  6 13:45 shared/HITS.pool.root.1
[2025-05-06 13:46:28]  *** Contents of shared directory: ***
[2025-05-06 13:46:28] total 414568
[2025-05-06 13:46:28] -rw-r--r--. 2 boinc boinc 221421156 May  6 11:13 ATLAS.root_0
[2025-05-06 13:46:28] -rw-r--r--. 2 boinc boinc    508878 May  6 11:13 input.tar.gz
[2025-05-06 13:46:28] -rw-r--r--. 2 boinc boinc     17569 May  6 11:13 start_atlas.sh
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc 201374971 May  6 13:45 HITS.pool.root.1
[2025-05-06 13:46:28] -rw-------. 1 boinc boinc   1187840 May  6 13:46 result.tar.gz
13:46:29 (3477): run_atlas exited; CPU time 59557.257518
13:46:29 (3477): called boinc_finish(0)

</stderr_txt>
]]>

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