Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:13:17 (2935227): wrapper (7.7.26015): starting
13:13:17 (2935227): wrapper: running run_atlas (--nthreads 4)
[2025-05-05 13:13:17] Arguments: --nthreads 4
[2025-05-05 13:13:17] Threads: 4
[2025-05-05 13:13:17] Checking for CVMFS
[2025-05-05 13:13:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 13:13:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 13:13:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 13:13:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 13:13:18] 2.12.7.0 1078480 693 45636 145647 3 56 4795564 6144001 13845 130560 0 4353027 99.998 230467 6074 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-05 13:13:18] CVMFS is ok
[2025-05-05 13:13:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-05 13:13:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-05 13:13:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-05 13:13:18] Further information can be found at the LHC@home message board.
[2025-05-05 13:13:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 13:13:18] Checking for apptainer binary...
[2025-05-05 13:13:18] apptainer is not installed, using version from CVMFS
[2025-05-05 13:13:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 13:13:18] mz32
[2025-05-05 13:13:18] apptainer works
[2025-05-05 13:13:18] Set ATHENA_PROC_NUMBER=4
[2025-05-05 13:13:18] Set ATHENA_CORE_NUMBER=4
[2025-05-05 13:13:18] Starting ATLAS job with PandaID=6634151487
[2025-05-05 13:13:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/69 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-05 17:21:05]  *** The last 200 lines of the pilot log: ***
[2025-05-05 17:21:05] 2025-05-06 00:20:51,707 | INFO     | sum of deviations: 123729342985.00002
[2025-05-05 17:21:05] 2025-05-06 00:20:51,707 | INFO     | mean x: 1746483435.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,707 | INFO     | mean y: 2247456.757201646
[2025-05-05 17:21:05] 2025-05-06 00:20:51,708 | INFO     | -- intersect: -48565424634.9143
[2025-05-05 17:21:05] 2025-05-06 00:20:51,708 | INFO     | intersect: -48565424634.9143
[2025-05-05 17:21:05] 2025-05-06 00:20:51,708 | INFO     | chi2: 5.568375488514725
[2025-05-05 17:21:05] 2025-05-06 00:20:51,709 | INFO     | sum of square deviations: 4180243959.5
[2025-05-05 17:21:05] 2025-05-06 00:20:51,711 | INFO     | sum of deviations: 135764610167.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,711 | INFO     | mean x: 1746483282.5
[2025-05-05 17:21:05] 2025-05-06 00:20:51,711 | INFO     | mean y: 2254137.2100840337
[2025-05-05 17:21:05] 2025-05-06 00:20:51,711 | INFO     | -- intersect: -56719464573.234726
[2025-05-05 17:21:05] 2025-05-06 00:20:51,712 | INFO     | intersect: -56719464573.234726
[2025-05-05 17:21:05] 2025-05-06 00:20:51,712 | INFO     | chi2: 4.812904921566024
[2025-05-05 17:21:05] 2025-05-06 00:20:51,712 | INFO     | current chi2=4.812904921566024 (change=13.567162783956057 %)
[2025-05-05 17:21:05] 2025-05-06 00:20:51,712 | INFO     | right removable region: 237
[2025-05-05 17:21:05] 2025-05-06 00:20:51,713 | INFO     | sum of square deviations: 4180243959.5
[2025-05-05 17:21:05] 2025-05-06 00:20:51,715 | INFO     | sum of deviations: 68241923598.99999
[2025-05-05 17:21:05] 2025-05-06 00:20:51,715 | INFO     | mean x: 1746483587.5
[2025-05-05 17:21:05] 2025-05-06 00:20:51,715 | INFO     | mean y: 2278841.529411765
[2025-05-05 17:21:05] 2025-05-06 00:20:51,715 | INFO     | -- intersect: -28508832160.551426
[2025-05-05 17:21:05] 2025-05-06 00:20:51,716 | INFO     | intersect: -28508832160.551426
[2025-05-05 17:21:05] 2025-05-06 00:20:51,716 | INFO     | chi2: 3.0748857458893046
[2025-05-05 17:21:05] 2025-05-06 00:20:51,717 | INFO     | current chi2=3.0748857458893046 (change=44.77948277317984 %)
[2025-05-05 17:21:05] 2025-05-06 00:20:51,717 | INFO     | sum of square deviations: 3922276332.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,719 | INFO     | sum of deviations: 25427239878.000004
[2025-05-05 17:21:05] 2025-05-06 00:20:51,719 | INFO     | mean x: 1746483740.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,720 | INFO     | mean y: 2304154.845493562
[2025-05-05 17:21:05] 2025-05-06 00:20:51,720 | INFO     | -- intersect: -11319759167.848158
[2025-05-05 17:21:05] 2025-05-06 00:20:51,720 | INFO     | intersect: -11319759167.848158
[2025-05-05 17:21:05] 2025-05-06 00:20:51,720 | INFO     | chi2: 1.7267212973112431
[2025-05-05 17:21:05] 2025-05-06 00:20:51,720 | INFO     | current chi2=1.7267212973112431 (change=43.8443753684302 %)
[2025-05-05 17:21:05] 2025-05-06 00:20:51,721 | INFO     | sum of square deviations: 3675146117.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,723 | INFO     | sum of deviations: -7230744128.999997
[2025-05-05 17:21:05] 2025-05-06 00:20:51,723 | INFO     | mean x: 1746483892.5
[2025-05-05 17:21:05] 2025-05-06 00:20:51,723 | INFO     | mean y: 2324218.3596491227
[2025-05-05 17:21:05] 2025-05-06 00:20:51,723 | INFO     | -- intersect: 3438480972.4197865
[2025-05-05 17:21:05] 2025-05-06 00:20:51,724 | INFO     | intersect: 3438480972.4197865
[2025-05-05 17:21:05] 2025-05-06 00:20:51,724 | INFO     | chi2: 0.7974901429288599
[2025-05-05 17:21:05] 2025-05-06 00:20:51,724 | INFO     | current chi2=0.7974901429288599 (change=53.81477345703279 %)
[2025-05-05 17:21:05] 2025-05-06 00:20:51,725 | INFO     | sum of square deviations: 3438620752.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,727 | INFO     | sum of deviations: -10786639821.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,727 | INFO     | mean x: 1746484045.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,727 | INFO     | mean y: 2326502.9551569507
[2025-05-05 17:21:05] 2025-05-06 00:20:51,727 | INFO     | -- intersect: 5480887735.850944
[2025-05-05 17:21:05] 2025-05-06 00:20:51,727 | INFO     | intersect: 5480887735.850944
[2025-05-05 17:21:05] 2025-05-06 00:20:51,727 | INFO     | chi2: 0.7855055337116524
[2025-05-05 17:21:05] 2025-05-06 00:20:51,728 | INFO     | current chi2=0.7855055337116524 (change=1.5027908900783167 %)
[2025-05-05 17:21:05] 2025-05-06 00:20:51,728 | INFO     | left removable region: 40
[2025-05-05 17:21:05] 2025-05-06 00:20:51,728 | INFO     | sum of square deviations: 2370641658.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,730 | INFO     | sum of deviations: 2426727558.9999995
[2025-05-05 17:21:05] 2025-05-06 00:20:51,730 | INFO     | mean x: 1746484472.0
[2025-05-05 17:21:05] 2025-05-06 00:20:51,730 | INFO     | mean y: 2335955.2944162437
[2025-05-05 17:21:05] 2025-05-06 00:20:51,730 | INFO     | -- intersect: -1785467775.0861468
[2025-05-05 17:21:05] 2025-05-06 00:20:51,730 | INFO     | intersect: -1785467775.0861468
[2025-05-05 17:21:05] 2025-05-06 00:20:51,731 | INFO     | chi2: 0.0004882976447464186
[2025-05-05 17:21:05] 2025-05-06 00:20:51,731 | INFO     | -- intersect: -1785467775.0861468
[2025-05-05 17:21:05] 2025-05-06 00:20:51,731 | INFO     | current memory leak: 1.02 B/s (using 197 data points, chi2=0.00)
[2025-05-05 17:21:05] 2025-05-06 00:20:51,732 | INFO     | ..............................
[2025-05-05 17:21:05] 2025-05-06 00:20:51,732 | INFO     | . Timing measurements:
[2025-05-05 17:21:05] 2025-05-06 00:20:51,732 | INFO     | . get job = 0 s
[2025-05-05 17:21:05] 2025-05-06 00:20:51,732 | INFO     | . initial setup = 3 s
[2025-05-05 17:21:05] 2025-05-06 00:20:51,732 | INFO     | . payload setup = 10 s
[2025-05-05 17:21:05] 2025-05-06 00:20:51,732 | INFO     | . stage-in = 0 s
[2025-05-05 17:21:05] 2025-05-06 00:20:51,732 | INFO     | . payload execution = 14789 s
[2025-05-05 17:21:05] 2025-05-06 00:20:51,733 | INFO     | . stage-out = 3 s
[2025-05-05 17:21:05] 2025-05-06 00:20:51,733 | INFO     | . log creation = 0 s
[2025-05-05 17:21:05] 2025-05-06 00:20:51,733 | INFO     | ..............................
[2025-05-05 17:21:05] 2025-05-06 00:20:52,063 | INFO     | 
[2025-05-05 17:21:05] 2025-05-06 00:20:52,063 | INFO     | job summary report
[2025-05-05 17:21:05] 2025-05-06 00:20:52,063 | INFO     | --------------------------------------------------
[2025-05-05 17:21:05] 2025-05-06 00:20:52,063 | INFO     | PanDA job id: 6634151487
[2025-05-05 17:21:05] 2025-05-06 00:20:52,063 | INFO     | task id: 44506063
[2025-05-05 17:21:05] 2025-05-06 00:20:52,063 | INFO     | errors: (none)
[2025-05-05 17:21:05] 2025-05-06 00:20:52,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | pilot state: finished 
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | transexitcode: 0
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | exeerrorcode: 0
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | exeerrordiag: 
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | exitcode: 0
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | exitmsg: OK
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | cpuconsumptiontime: 54730 s
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | nevents: 400
[2025-05-05 17:21:05] 2025-05-06 00:20:52,064 | INFO     | neventsw: 0
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | pid: 2946782
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | pgrp: 2946782
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | corecount: 4
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | event service: False
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | sizes: {0: 2393570, 1: 2393769, 8: 2393975, 12: 2394003, 14803: 2425033, 14804: 2425032, 14807: 2434173, 14809: 2434229, 14817: 2434399}
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | --------------------------------------------------
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | 
[2025-05-05 17:21:05] 2025-05-06 00:20:52,065 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/69
[2025-05-05 17:21:05] 2025-05-06 00:20:52,098 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,099 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,099 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,101 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-05 17:21:05] 2025-05-06 00:20:52,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,101 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-05 17:21:05] 2025-05-06 00:20:52,102 | INFO     | job 6634151487 has completed (purged errors)
[2025-05-05 17:21:05] 2025-05-06 00:20:52,102 | INFO     | overall cleanup function is called
[2025-05-05 17:21:05] 2025-05-06 00:20:53,115 | INFO     | --- collectZombieJob: --- 10, [2946782]
[2025-05-05 17:21:05] 2025-05-06 00:20:53,115 | INFO     | zombie collector waiting for pid 2946782
[2025-05-05 17:21:05] 2025-05-06 00:20:53,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-05 17:21:05] 2025-05-06 00:20:53,115 | INFO     | collected zombie processes
[2025-05-05 17:21:05] 2025-05-06 00:20:53,115 | INFO     | will attempt to kill all subprocesses of pid=2946782
[2025-05-05 17:21:05] 2025-05-06 00:20:53,769 | INFO     | process IDs to be killed: [2946782] (in reverse order)
[2025-05-05 17:21:05] 2025-05-06 00:20:54,053 | WARNING  | found no corresponding commands to process id(s)
[2025-05-05 17:21:05] 2025-05-06 00:20:54,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-05 17:21:05] 2025-05-06 00:20:54,071 | INFO     | did not find any defunct processes belonging to 2946782
[2025-05-05 17:21:05] 2025-05-06 00:20:54,088 | INFO     | did not find any defunct processes belonging to 2946782
[2025-05-05 17:21:05] 2025-05-06 00:20:54,088 | INFO     | ready for new job
[2025-05-05 17:21:05] 2025-05-06 00:20:54,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-05 17:21:05] 2025-05-06 00:20:54,091 | INFO     | **************************************
[2025-05-05 17:21:05] 2025-05-06 00:20:54,091 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-05 17:21:05] 2025-05-06 00:20:54,091 | INFO     | **************************************
[2025-05-05 17:21:05] 2025-05-06 00:20:54,092 | INFO     | 
[2025-05-05 17:21:05] 2025-05-06 00:20:54,102 | INFO     | architecture information:
[2025-05-05 17:21:05] 2025-05-06 00:20:54,103 | INFO     | executing command: cat /etc/os-release
[2025-05-05 17:21:05] 2025-05-06 00:20:54,127 | INFO     | cat /etc/os-release:
[2025-05-05 17:21:05] NAME="CentOS Linux"
[2025-05-05 17:21:05] VERSION="7 (Core)"
[2025-05-05 17:21:05] ID="centos"
[2025-05-05 17:21:05] ID_LIKE="rhel fedora"
[2025-05-05 17:21:05] VERSION_ID="7"
[2025-05-05 17:21:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-05 17:21:05] ANSI_COLOR="0;31"
[2025-05-05 17:21:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-05 17:21:05] HOME_URL="https://www.centos.org/"
[2025-05-05 17:21:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-05 17:21:05] 
[2025-05-05 17:21:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-05 17:21:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-05 17:21:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-05 17:21:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-05 17:21:05] 
[2025-05-05 17:21:05] 2025-05-06 00:20:54,127 | INFO     | **************************************
[2025-05-05 17:21:05] 2025-05-06 00:20:54,631 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/69
[2025-05-05 17:21:05] 2025-05-06 00:20:54,659 | INFO     | sufficient remaining disk space (257811283968 B)
[2025-05-05 17:21:05] 2025-05-06 00:20:54,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-05 17:21:05] 2025-05-06 00:20:54,660 | INFO     | current server update state: UPDATING_FINAL
[2025-05-05 17:21:05] 2025-05-06 00:20:54,660 | INFO     | update_server=False
[2025-05-05 17:21:05] 2025-05-06 00:20:54,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-05 17:21:05] 2025-05-06 00:20:54,663 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-05 17:21:05] 2025-05-06 00:20:54,663 | INFO     | found 0 job(s) in 20 queues
[2025-05-05 17:21:05] 2025-05-06 00:20:54,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-05 17:21:05] 2025-05-06 00:20:54,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-05 17:21:05] 2025-05-06 00:20:54,713 | INFO     | all job control threads have been joined
[2025-05-05 17:21:05] 2025-05-06 00:20:55,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-05 17:21:05] 2025-05-06 00:20:55,006 | INFO     | aborting loop
[2025-05-05 17:21:05] 2025-05-06 00:20:55,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-05 17:21:05] 2025-05-06 00:20:55,422 | INFO     | all data control threads have been joined
[2025-05-05 17:21:05] 2025-05-06 00:20:55,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-05 17:21:05] 2025-05-06 00:20:55,666 | INFO     | [job] retrieve thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:55,718 | INFO     | [job] control thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:55,770 | INFO     | all payload control threads have been joined
[2025-05-05 17:21:05] 2025-05-06 00:20:55,810 | INFO     | [payload] validate_post thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,011 | INFO     | [job] job monitor thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,172 | INFO     | [payload] execute_payloads thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,227 | INFO     | [job] validate thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,419 | INFO     | [payload] failed_post thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,427 | INFO     | [data] control thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,473 | INFO     | [data] copytool_in thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,570 | INFO     | [job] create_data_payload thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,660 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,775 | INFO     | [payload] control thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,824 | INFO     | [payload] validate_pre thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:56,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-05 17:21:05] 2025-05-06 00:20:57,513 | INFO     | [data] copytool_out thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:57,859 | INFO     | [job] queue monitor thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:59,037 | INFO     | [data] queue_monitor thread has finished
[2025-05-05 17:21:05] 2025-05-06 00:20:59,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131010315581248)>', '<ExcThread(monitor, started 131009630684928)>']
[2025-05-05 17:21:05] 2025-05-06 00:20:59,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-05 17:21:05] 2025-05-06 00:20:59,689 | INFO     | [monitor] control thread has ended
[2025-05-05 17:21:05] 2025-05-06 00:21:04,669 | INFO     | all workflow threads have been joined
[2025-05-05 17:21:05] 2025-05-06 00:21:04,669 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-05 17:21:05] 2025-05-06 00:21:04,669 | INFO     | traces error code: 0
[2025-05-05 17:21:05] 2025-05-06 00:21:04,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-05 17:21:05] 2025-05-06 00:21:04,850 [wrapper] ==== pilot stdout END ====
[2025-05-05 17:21:05] 2025-05-06 00:21:04,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-05 17:21:05] 2025-05-06 00:21:04,859 [wrapper] pilotpid: 2939378
[2025-05-05 17:21:05] 2025-05-06 00:21:04,868 [wrapper] Pilot exit status: 0
[2025-05-05 17:21:05] 2025-05-06 00:21:04,883 [wrapper] pandaids: 6634151487
[2025-05-05 17:21:05] 2025-05-06 00:21:05,085 [wrapper] cleanup supervisor_pilot 3603358 2939379
[2025-05-05 17:21:05] 2025-05-06 00:21:05,090 [wrapper] Test setup, not cleaning
[2025-05-05 17:21:05] 2025-05-06 00:21:05,095 [wrapper] apfmon messages muted
[2025-05-05 17:21:05] 2025-05-06 00:21:05,100 [wrapper] ==== wrapper stdout END ====
[2025-05-05 17:21:05] 2025-05-06 00:21:05,106 [wrapper] ==== wrapper stderr END ====
[2025-05-05 17:21:05]  *** Error codes and diagnostics ***
[2025-05-05 17:21:05]     "exeErrorCode": 0,
[2025-05-05 17:21:05]     "exeErrorDiag": "",
[2025-05-05 17:21:05]     "pilotErrorCode": 0,
[2025-05-05 17:21:05]     "pilotErrorDiag": "",
[2025-05-05 17:21:05]  *** Listing of results directory ***
[2025-05-05 17:21:05] total 424068
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc    495897 May  5 00:58 pilot3.tar.gz
[2025-05-05 17:21:05] -rwx------ 1 boinc boinc     37140 May  5 01:14 runpilot2-wrapper.sh
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc      5111 May  5 01:14 queuedata.json
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc       100 May  5 13:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-05 17:21:05] -rwxr-xr-x 1 boinc boinc      7986 May  5 13:13 run_atlas
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc       105 May  5 13:13 job.xml
[2025-05-05 17:21:05] -rw-r--r-- 2 boinc boinc 222667885 May  5 13:13 EVNT.44506061._000242.pool.root.1
[2025-05-05 17:21:05] -rw-r--r-- 2 boinc boinc     17569 May  5 13:13 start_atlas.sh
[2025-05-05 17:21:05] drwxrwx--x 2 boinc boinc      4096 May  5 13:13 shared
[2025-05-05 17:21:05] -rw-r--r-- 2 boinc boinc    508869 May  5 13:13 input.tar.gz
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc         0 May  5 13:13 boinc_setup_complete
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc     10260 May  5 13:13 init_data.xml
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc         0 May  5 13:13 boinc_lockfile
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc      2555 May  5 13:13 pandaJob.out
[2025-05-05 17:21:05] -rw------- 1 boinc boinc       424 May  5 13:13 setup.sh.local
[2025-05-05 17:21:05] -rw------- 1 boinc boinc    996880 May  5 13:13 agis_schedconf.cvmfs.json
[2025-05-05 17:21:05] drwx------ 4 boinc boinc      4096 May  5 13:13 pilot3
[2025-05-05 17:21:05] -rw------- 1 boinc boinc 204302229 May  5 17:20 HITS.44506063._006057.pool.root.1
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc       531 May  5 17:20 boinc_task_state.xml
[2025-05-05 17:21:05] -rw------- 1 boinc boinc        95 May  5 17:20 pilot_heartbeat.json
[2025-05-05 17:21:05] -rw------- 1 boinc boinc      1025 May  5 17:20 memory_monitor_summary.json
[2025-05-05 17:21:05] -rw------- 1 boinc boinc   1596741 May  5 17:20 agis_ddmendpoints.agis.ALL.json
[2025-05-05 17:21:05] -rw------- 1 boinc boinc    336611 May  5 17:20 log.44506063._006057.job.log.tgz.1
[2025-05-05 17:21:05] -rw------- 1 boinc boinc      7629 May  5 17:20 heartbeat.json
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc      8192 May  5 17:21 boinc_mmap_file
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc        28 May  5 17:21 wrapper_checkpoint.txt
[2025-05-05 17:21:05] -rw------- 1 boinc boinc      4485 May  5 17:21 pilotlog.txt
[2025-05-05 17:21:05] -rw------- 1 boinc boinc   1370385 May  5 17:21 log.44506063._006057.job.log.1
[2025-05-05 17:21:05] -rw------- 1 boinc boinc       357 May  5 17:21 output.list
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc       620 May  5 17:21 runtime_log
[2025-05-05 17:21:05] -rw------- 1 boinc boinc   1730560 May  5 17:21 result.tar.gz
[2025-05-05 17:21:05] -rw------- 1 boinc boinc       657 May  5 17:21 YxNODmB95V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmNs0LDm9JyDym.diag
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc     11142 May  5 17:21 runtime_log.err
[2025-05-05 17:21:05] -rw-r--r-- 1 boinc boinc     20884 May  5 17:21 stderr.txt
[2025-05-05 17:21:05] HITS file was successfully produced:
[2025-05-05 17:21:05] -rw------- 1 boinc boinc 204302229 May  5 17:20 shared/HITS.pool.root.1
[2025-05-05 17:21:05]  *** Contents of shared directory: ***
[2025-05-05 17:21:05] total 419188
[2025-05-05 17:21:05] -rw-r--r-- 2 boinc boinc 222667885 May  5 13:13 ATLAS.root_0
[2025-05-05 17:21:05] -rw-r--r-- 2 boinc boinc     17569 May  5 13:13 start_atlas.sh
[2025-05-05 17:21:05] -rw-r--r-- 2 boinc boinc    508869 May  5 13:13 input.tar.gz
[2025-05-05 17:21:05] -rw------- 1 boinc boinc 204302229 May  5 17:20 HITS.pool.root.1
[2025-05-05 17:21:05] -rw------- 1 boinc boinc   1730560 May  5 17:21 result.tar.gz
17:21:06 (2935227): run_atlas exited; CPU time 55664.971132
17:21:06 (2935227): called boinc_finish(0)

</stderr_txt>
]]>

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