Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:24:25 (282154): wrapper (7.7.26015): starting
22:24:25 (282154): wrapper: running run_atlas (--nthreads 12)
[2025-05-05 22:24:25] Arguments: --nthreads 12
[2025-05-05 22:24:25] Threads: 12
[2025-05-05 22:24:25] Checking for CVMFS
[2025-05-05 22:24:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 22:24:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 22:24:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 22:24:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 22:24:26] 2.9.2.0 165609 246 55412 145648 2 56 15537918 36864001 0 130560 0 294014 99.992 77670 10280 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-05 22:24:26] CVMFS is ok
[2025-05-05 22:24:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-05 22:24:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-05 22:24:26] Further information can be found at the LHC@home message board.
[2025-05-05 22:24:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 22:24:26] Checking for apptainer binary...
[2025-05-05 22:24:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-05 22:24:26] Running /usr/bin/apptainer --version
[2025-05-05 22:24:26] apptainer version 1.3.6-6.1
[2025-05-05 22:24:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 22:24:26] thserv06
[2025-05-05 22:24:26] apptainer works
[2025-05-05 22:24:26] Set ATHENA_PROC_NUMBER=12
[2025-05-05 22:24:26] Set ATHENA_CORE_NUMBER=12
[2025-05-05 22:24:26] Starting ATLAS job with PandaID=6634149167
[2025-05-05 22:24:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-05 23:16:15]  *** The last 200 lines of the pilot log: ***
[2025-05-05 23:16:15]  storage_token=
[2025-05-05 23:16:15]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6634149167/log.44506063._005709.job.log.tgz.1
[2025-05-05 23:16:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/0b/log.44506063._005709.job.log.tgz.1
[2025-05-05 23:16:15]  workdir=None
[2025-05-05 23:16:15] ]
[2025-05-05 23:16:15] 2025-05-05 21:15:49,126 | INFO     | transferring file log.44506063._005709.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6634149167/log.44506063._005709.job.log.tgz.1 to /local/data/boinc/
[2025-05-05 23:16:15] 2025-05-05 21:15:49,127 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6634149167/log.44506063._005709.job.log.tgz.1 /local/data/boinc/slots/0/log.44506063._0057
[2025-05-05 23:16:15] 2025-05-05 21:15:49,155 | INFO     | adding to output.list: log.44506063._005709.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/0b/log.44506063._005709.job.log.tg
[2025-05-05 23:16:15] 2025-05-05 21:15:49,155 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-05 23:16:15] 2025-05-05 21:15:49,155 | INFO     | summary of transferred files:
[2025-05-05 23:16:15] 2025-05-05 21:15:49,155 | INFO     |  -- lfn=log.44506063._005709.job.log.tgz.1, status_code=0, status=transferred
[2025-05-05 23:16:15] 2025-05-05 21:15:49,156 | INFO     | stage-out finished correctly
[2025-05-05 23:16:15] 2025-05-05 21:15:50,175 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-05 23:16:15] 2025-05-05 21:15:51,363 | INFO     | 3071s have passed since pilot start - server update state is 'RUNNING'
[2025-05-05 23:16:15] 2025-05-05 21:15:52,417 | INFO     | job 6634149167 has state=finished
[2025-05-05 23:16:15] 2025-05-05 21:15:52,417 | INFO     | preparing for final server update for job 6634149167 in state='finished'
[2025-05-05 23:16:15] 2025-05-05 21:15:52,418 | INFO     | this job has now completed (state=finished)
[2025-05-05 23:16:15] 2025-05-05 21:15:52,418 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-05 23:16:15] 2025-05-05 21:15:52,418 | INFO     | log transfer has been attempted: DONE
[2025-05-05 23:16:15] 2025-05-05 21:15:52,419 | INFO     | job 6634149167 has finished - writing final server update
[2025-05-05 23:16:15] 2025-05-05 21:15:52,419 | INFO     | total number of processed events: 400 (read)
[2025-05-05 23:16:15] 2025-05-05 21:15:52,426 | INFO     | executing command: lscpu
[2025-05-05 23:16:15] 2025-05-05 21:15:52,487 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-05 23:16:15] 2025-05-05 21:15:53,757 | WARNING  | process 292943 can no longer be monitored (due to stat problems) - aborting
[2025-05-05 23:16:15] 2025-05-05 21:15:53,758 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6634149167/memory_monitor_summary.json (trf name=prmon)
[2025-05-05 23:16:15] 2025-05-05 21:15:53,758 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6634149167/memory_monitor_summary.json (trf name=prmon)
[2025-05-05 23:16:15] 2025-05-05 21:15:53,759 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4041036 B
[2025-05-05 23:16:15] 2025-05-05 21:15:53,760 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16271 B
[2025-05-05 23:16:15] 2025-05-05 21:15:53,760 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-05 23:16:15] 2025-05-05 21:16:01,839 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-05 23:16:15] 2025-05-05 21:16:01,844 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6634149167/memory_monitor_summary.json (trf name=prmon)
[2025-05-05 23:16:15] 2025-05-05 21:16:01,848 | INFO     | extracted standard info from prmon json
[2025-05-05 23:16:15] 2025-05-05 21:16:01,848 | INFO     | extracted standard memory fields from prmon json
[2025-05-05 23:16:15] 2025-05-05 21:16:01,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-05 23:16:15] 2025-05-05 21:16:01,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-05 23:16:15] 2025-05-05 21:16:01,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-05 23:16:15] 2025-05-05 21:16:01,853 | INFO     | fitting pss+swap vs Time
[2025-05-05 23:16:15] 2025-05-05 21:16:01,854 | INFO     | sum of square deviations: 24640462.0
[2025-05-05 23:16:15] 2025-05-05 21:16:01,854 | INFO     | sum of deviations: 13187457508.0
[2025-05-05 23:16:15] 2025-05-05 21:16:01,855 | INFO     | mean x: 1746478303.0
[2025-05-05 23:16:15] 2025-05-05 21:16:01,855 | INFO     | mean y: 2843192.0
[2025-05-05 23:16:15] 2025-05-05 21:16:01,855 | INFO     | -- intersect: -934703998321.6229
[2025-05-05 23:16:15] 2025-05-05 21:16:01,855 | INFO     | intersect: -934703998321.6229
[2025-05-05 23:16:15] 2025-05-05 21:16:01,855 | INFO     | chi2: 1.484422795512255
[2025-05-05 23:16:15] 2025-05-05 21:16:01,856 | INFO     | -- intersect: -934703998321.6229
[2025-05-05 23:16:15] 2025-05-05 21:16:01,858 | INFO     | current memory leak: 535.20 B/s (using 43 data points, chi2=1.48)
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | ..............................
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | . Timing measurements:
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | . get job = 0 s
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | . initial setup = 1 s
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | . payload setup = 9 s
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | . stage-in = 0 s
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | . payload execution = 3034 s
[2025-05-05 23:16:15] 2025-05-05 21:16:01,859 | INFO     | . stage-out = 0 s
[2025-05-05 23:16:15] 2025-05-05 21:16:01,860 | INFO     | . log creation = 0 s
[2025-05-05 23:16:15] 2025-05-05 21:16:01,860 | INFO     | ..............................
[2025-05-05 23:16:15] 2025-05-05 21:16:01,862 | INFO     | sufficient remaining disk space (470871441408 B)
[2025-05-05 23:16:15] 2025-05-05 21:16:01,877 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-05 23:16:15] 2025-05-05 21:16:01,986 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6634149167: 4327854 B (within 2537553920 B limit)
[2025-05-05 23:16:15] 2025-05-05 21:16:01,987 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6634149167/HITS.44506063._005709.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-05 23:16:15] 2025-05-05 21:16:01,987 | INFO     | total size of present files: 0 B (workdir size: 4327854 B)
[2025-05-05 23:16:15] 2025-05-05 21:16:01,987 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6634149167/HITS.44506063._005709.pool.root.1 since it does not exist
[2025-05-05 23:16:15] 2025-05-05 21:16:02,180 | INFO     | number of running child processes to parent process 292943: 1
[2025-05-05 23:16:15] 2025-05-05 21:16:02,180 | INFO     | maximum number of monitored processes: 6
[2025-05-05 23:16:15] 2025-05-05 21:16:02,180 | INFO     | aborting job monitoring since job object (job id=6634149167) has expired
[2025-05-05 23:16:15] 2025-05-05 21:16:02,320 | INFO     | 
[2025-05-05 23:16:15] 2025-05-05 21:16:02,320 | INFO     | job summary report
[2025-05-05 23:16:15] 2025-05-05 21:16:02,320 | INFO     | --------------------------------------------------
[2025-05-05 23:16:15] 2025-05-05 21:16:02,320 | INFO     | PanDA job id: 6634149167
[2025-05-05 23:16:15] 2025-05-05 21:16:02,320 | INFO     | task id: 44506063
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | errors: (none)
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | pilot state: finished 
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | transexitcode: 0
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | exeerrorcode: 0
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | exeerrordiag: 
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | exitcode: 0
[2025-05-05 23:16:15] 2025-05-05 21:16:02,321 | INFO     | exitmsg: OK
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | cpuconsumptiontime: 25927 s
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | nevents: 400
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | neventsw: 0
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | pid: 292943
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | pgrp: 292943
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | corecount: 12
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | event service: False
[2025-05-05 23:16:15] 2025-05-05 21:16:02,322 | INFO     | sizes: {0: 2393736, 8: 2393942, 11: 2393970, 3048: 2419193, 3049: 2428140, 3050: 2428196, 3062: 2428494}
[2025-05-05 23:16:15] 2025-05-05 21:16:02,323 | INFO     | --------------------------------------------------
[2025-05-05 23:16:15] 2025-05-05 21:16:02,323 | INFO     | 
[2025-05-05 23:16:15] 2025-05-05 21:16:02,323 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-05 23:16:15] 2025-05-05 21:16:02,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,352 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-05 23:16:15] 2025-05-05 21:16:02,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-05 23:16:15] 2025-05-05 21:16:02,355 | INFO     | job 6634149167 has completed (purged errors)
[2025-05-05 23:16:15] 2025-05-05 21:16:02,355 | INFO     | overall cleanup function is called
[2025-05-05 23:16:15] 2025-05-05 21:16:02,631 | INFO     | PID=286058 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-05 23:16:15] 2025-05-05 21:16:03,365 | INFO     | --- collectZombieJob: --- 10, [292943]
[2025-05-05 23:16:15] 2025-05-05 21:16:03,365 | INFO     | zombie collector waiting for pid 292943
[2025-05-05 23:16:15] 2025-05-05 21:16:03,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-05 23:16:15] 2025-05-05 21:16:03,367 | INFO     | collected zombie processes
[2025-05-05 23:16:15] 2025-05-05 21:16:03,367 | INFO     | will attempt to kill all subprocesses of pid=292943
[2025-05-05 23:16:15] 2025-05-05 21:16:03,566 | INFO     | process IDs to be killed: [292943] (in reverse order)
[2025-05-05 23:16:15] 2025-05-05 21:16:03,626 | WARNING  | found no corresponding commands to process id(s)
[2025-05-05 23:16:15] 2025-05-05 21:16:03,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-05 23:16:15] 2025-05-05 21:16:03,630 | INFO     | did not find any defunct processes belonging to 292943
[2025-05-05 23:16:15] 2025-05-05 21:16:03,634 | INFO     | did not find any defunct processes belonging to 292943
[2025-05-05 23:16:15] 2025-05-05 21:16:03,634 | INFO     | ready for new job
[2025-05-05 23:16:15] 2025-05-05 21:16:03,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-05 23:16:15] 2025-05-05 21:16:03,636 | INFO     | **************************************
[2025-05-05 23:16:15] 2025-05-05 21:16:03,636 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-05 23:16:15] 2025-05-05 21:16:03,636 | INFO     | **************************************
[2025-05-05 23:16:15] 2025-05-05 21:16:03,636 | INFO     | 
[2025-05-05 23:16:15] 2025-05-05 21:16:03,638 | INFO     | architecture information:
[2025-05-05 23:16:15] 2025-05-05 21:16:03,639 | INFO     | executing command: cat /etc/os-release
[2025-05-05 23:16:15] 2025-05-05 21:16:03,659 | INFO     | cat /etc/os-release:
[2025-05-05 23:16:15] NAME="CentOS Linux"
[2025-05-05 23:16:15] VERSION="7 (Core)"
[2025-05-05 23:16:15] ID="centos"
[2025-05-05 23:16:15] ID_LIKE="rhel fedora"
[2025-05-05 23:16:15] VERSION_ID="7"
[2025-05-05 23:16:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-05 23:16:15] ANSI_COLOR="0;31"
[2025-05-05 23:16:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-05 23:16:15] HOME_URL="https://www.centos.org/"
[2025-05-05 23:16:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-05 23:16:15] 
[2025-05-05 23:16:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-05 23:16:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-05 23:16:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-05 23:16:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-05 23:16:15] 
[2025-05-05 23:16:15] 2025-05-05 21:16:03,659 | INFO     | **************************************
[2025-05-05 23:16:15] 2025-05-05 21:16:04,162 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-05 23:16:15] 2025-05-05 21:16:04,185 | INFO     | sufficient remaining disk space (470875635712 B)
[2025-05-05 23:16:15] 2025-05-05 21:16:04,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-05 23:16:15] 2025-05-05 21:16:04,186 | INFO     | current server update state: UPDATING_FINAL
[2025-05-05 23:16:15] 2025-05-05 21:16:04,186 | INFO     | update_server=False
[2025-05-05 23:16:15] 2025-05-05 21:16:04,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-05 23:16:15] 2025-05-05 21:16:04,637 | INFO     | found 0 job(s) in 20 queues
[2025-05-05 23:16:15] 2025-05-05 21:16:04,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-05 23:16:15] 2025-05-05 21:16:04,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-05 23:16:15] 2025-05-05 21:16:04,685 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-05 23:16:15] 2025-05-05 21:16:04,685 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-05 23:16:15] 2025-05-05 21:16:04,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-05 23:16:15] 2025-05-05 21:16:04,685 | INFO     | will abort loop
[2025-05-05 23:16:15] 2025-05-05 21:16:04,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-05 23:16:15] 2025-05-05 21:16:05,192 | INFO     | [job] retrieve thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:05,220 | INFO     | all data control threads have been joined
[2025-05-05 23:16:15] 2025-05-05 21:16:05,225 | INFO     | [payload] failed_post thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:05,235 | INFO     | [job] create_data_payload thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:05,261 | INFO     | [data] copytool_in thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:05,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-05 23:16:15] 2025-05-05 21:16:05,329 | INFO     | all payload control threads have been joined
[2025-05-05 23:16:15] 2025-05-05 21:16:05,354 | INFO     | [payload] execute_payloads thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:05,455 | INFO     | [payload] validate_pre thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:05,691 | INFO     | [job] job monitor thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:05,823 | INFO     | all job control threads have been joined
[2025-05-05 23:16:15] 2025-05-05 21:16:06,224 | INFO     | [data] control thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:06,334 | INFO     | [payload] control thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:06,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:06,394 | INFO     | [job] validate thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:06,585 | INFO     | [payload] validate_post thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:06,746 | INFO     | [data] copytool_out thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:06,829 | INFO     | [job] control thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:06,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-05 23:16:15] 2025-05-05 21:16:08,003 | INFO     | [job] queue monitor thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:09,310 | INFO     | [data] queue_monitor thread has finished
[2025-05-05 23:16:15] 2025-05-05 21:16:10,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705452996416)>', '<ExcThread(monitor, started 139704750044928)>']
[2025-05-05 23:16:15] 2025-05-05 21:16:10,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-05 23:16:15] 2025-05-05 21:16:10,668 | INFO     | [monitor] control thread has ended
[2025-05-05 23:16:15] 2025-05-05 21:16:15,591 | INFO     | all workflow threads have been joined
[2025-05-05 23:16:15] 2025-05-05 21:16:15,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-05 23:16:15] 2025-05-05 21:16:15,592 | INFO     | traces error code: 0
[2025-05-05 23:16:15] 2025-05-05 21:16:15,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-05 23:16:15] 2025-05-05 21:16:15,710 [wrapper] ==== pilot stdout END ====
[2025-05-05 23:16:15] 2025-05-05 21:16:15,716 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-05 23:16:15] 2025-05-05 21:16:15,721 [wrapper] pilotpid: 286058
[2025-05-05 23:16:15] 2025-05-05 21:16:15,727 [wrapper] Pilot exit status: 0
[2025-05-05 23:16:15] 2025-05-05 21:16:15,748 [wrapper] pandaids: 6634149167
[2025-05-05 23:16:15] 2025-05-05 21:16:15,795 [wrapper] cleanup supervisor_pilot  302752 286059
[2025-05-05 23:16:15] 2025-05-05 21:16:15,801 [wrapper] Test setup, not cleaning
[2025-05-05 23:16:15] 2025-05-05 21:16:15,808 [wrapper] apfmon messages muted
[2025-05-05 23:16:15] 2025-05-05 21:16:15,814 [wrapper] ==== wrapper stdout END ====
[2025-05-05 23:16:15] 2025-05-05 21:16:15,821 [wrapper] ==== wrapper stderr END ====
[2025-05-05 23:16:15]  *** Error codes and diagnostics ***
[2025-05-05 23:16:15]     "exeErrorCode": 0,
[2025-05-05 23:16:15]     "exeErrorDiag": "",
[2025-05-05 23:16:15]     "pilotErrorCode": 0,
[2025-05-05 23:16:15]     "pilotErrorDiag": "",
[2025-05-05 23:16:15]  *** Listing of results directory ***
[2025-05-05 23:16:15] total 420348
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc    495897 May  5 09:19 pilot3.tar.gz
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc      5111 May  5 09:47 queuedata.json
[2025-05-05 23:16:15] -rwx------ 1 boinc boinc     37140 May  5 09:48 runpilot2-wrapper.sh
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc       100 May  5 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-05 23:16:15] -rwxr-xr-x 1 boinc boinc      7986 May  5 22:24 run_atlas
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc       105 May  5 22:24 job.xml
[2025-05-05 23:16:15] -rw-r--r-- 2 boinc boinc 222784251 May  5 22:24 EVNT.44506061._000225.pool.root.1
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc      6816 May  5 22:24 init_data.xml
[2025-05-05 23:16:15] drwxrwx--x 2 boinc boinc      4096 May  5 22:24 shared
[2025-05-05 23:16:15] -rw-r--r-- 2 boinc boinc    508873 May  5 22:24 input.tar.gz
[2025-05-05 23:16:15] -rw-r--r-- 2 boinc boinc     17569 May  5 22:24 start_atlas.sh
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc         0 May  5 22:24 boinc_lockfile
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc      2555 May  5 22:24 pandaJob.out
[2025-05-05 23:16:15] -rw------- 1 boinc boinc       424 May  5 22:24 setup.sh.local
[2025-05-05 23:16:15] -rw------- 1 boinc boinc    996872 May  5 22:24 agis_schedconf.cvmfs.json
[2025-05-05 23:16:15] -rw------- 1 boinc boinc   1596741 May  5 22:24 agis_ddmendpoints.agis.ALL.json
[2025-05-05 23:16:15] drwx------ 4 boinc boinc      4096 May  5 22:24 pilot3
[2025-05-05 23:16:15] -rw------- 1 boinc boinc 202491990 May  5 23:14 HITS.44506063._005709.pool.root.1
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc       529 May  5 23:14 boinc_task_state.xml
[2025-05-05 23:16:15] -rw------- 1 boinc boinc        95 May  5 23:15 pilot_heartbeat.json
[2025-05-05 23:16:15] -rw------- 1 boinc boinc      1026 May  5 23:15 memory_monitor_summary.json
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc      8192 May  5 23:15 boinc_mmap_file
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc        27 May  5 23:15 wrapper_checkpoint.txt
[2025-05-05 23:16:15] -rw------- 1 boinc boinc    343760 May  5 23:15 log.44506063._005709.job.log.tgz.1
[2025-05-05 23:16:15] -rw------- 1 boinc boinc      7669 May  5 23:16 heartbeat.json
[2025-05-05 23:16:15] -rw------- 1 boinc boinc      4543 May  5 23:16 pilotlog.txt
[2025-05-05 23:16:15] -rw------- 1 boinc boinc    313325 May  5 23:16 log.44506063._005709.job.log.1
[2025-05-05 23:16:15] -rw------- 1 boinc boinc       357 May  5 23:16 output.list
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc       620 May  5 23:16 runtime_log
[2025-05-05 23:16:15] -rw------- 1 boinc boinc    675840 May  5 23:16 result.tar.gz
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc     11111 May  5 23:16 runtime_log.err
[2025-05-05 23:16:15] -rw------- 1 boinc boinc       662 May  5 23:16 gxyNDmlj5V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1n0LDmu0SuRn.diag
[2025-05-05 23:16:15] -rw-r--r-- 1 boinc boinc     22473 May  5 23:16 stderr.txt
[2025-05-05 23:16:15] HITS file was successfully produced:
[2025-05-05 23:16:15] -rw------- 1 boinc boinc 202491990 May  5 23:14 shared/HITS.pool.root.1
[2025-05-05 23:16:15]  *** Contents of shared directory: ***
[2025-05-05 23:16:15] total 416500
[2025-05-05 23:16:15] -rw-r--r-- 2 boinc boinc 222784251 May  5 22:24 ATLAS.root_0
[2025-05-05 23:16:15] -rw-r--r-- 2 boinc boinc    508873 May  5 22:24 input.tar.gz
[2025-05-05 23:16:15] -rw-r--r-- 2 boinc boinc     17569 May  5 22:24 start_atlas.sh
[2025-05-05 23:16:15] -rw------- 1 boinc boinc 202491990 May  5 23:14 HITS.pool.root.1
[2025-05-05 23:16:15] -rw------- 1 boinc boinc    675840 May  5 23:16 result.tar.gz
23:16:17 (282154): run_atlas exited; CPU time 25974.200979
23:16:17 (282154): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN